| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928706
Identifier: 187928706
GI number: 187928706
Start: 1706530
End: 1707747
Strand: Direct
Name: 187928706
Synonym: Rpic_1623
Alternate gene names: NA
Gene position: 1706530-1707747 (Clockwise)
Preceding gene: 187928705
Following gene: 187928707
Centisome position: 43.28
GC content: 63.63
Gene sequence:
>1218_bases ATGCTCGAACGGATCATCAAGCAGCGTGGTCAACTGGTGCTGAACCACCCTTTCTTCGGGGCGCTGGCGCTTCGTCTGAA GCCTGTCGAAGACCCCACGTGCCACACGTTCTGGGTTGACGGCCGGGCGCTTGGCTACAACGCGCAGTTCGTGGCCACCT TGGACGATCTTGAACTGCGTGGGTGTCTCGCTCATGAGGTGCTGCACCCCGCCAGCGGGCATTGCTGGCGGCGTGGCAAT CGCGATCAGAAGCTGTGGAACGCGGCCTGTGACTATGCGGTCAATCCGGTTGTGCTCGCTGCCAACTTGAAGCTCCCGAA AGGCGCACTGCTGGAGGAACGCTTCACTGGCAAGTCAGCAGAGGAGATTTATGCGGTGCTCCGCCAGGAACGGCCACCTG AGGCTCCCCAAGAGCCTCAGGCCCAGGGCGCTCGCGGTACGGGCGCTGGGCTGCCATCGCGCGACCCGAACGCATCCGAT GCGGCACAAGGGCAGGGCGCTGCCGAAGGTGGCAACGCCGACGGCAGCCCGACGTATGAGCCCGGCGACATCCGCAAGGA TCGCGGCAATGACCAGGCCTCGACGGAGACGCAGTGGAAAGTCGCGGCGATGAAGGCTGCGCAGGTGGCCAAGATGCGCG GCAAGTTCGGTGCGGATCTGCAGACCGTGGTTGACCAACTGGTTACGCCGGCGGTCGATTGGCGTGCGGCCCTCGCGCGC TTTGCAAGCGAGTCGGCCCAAGCCGACTACAGCTGGTCGATACCGAACCGCCGCTTCACGCACCTTGGTCTCTATTTGCC GGCGCTTCATAGCCGGCGGGTGGGGGACGCCGTGTTTGTGCGCGATTCGAGTGGCTCGGTGTTCGATGAAACGCAACGCC AGTTCGCATCCGAGATCCACCGCGTTTTCGATGAAGTGAAGCCATCGCGGCTGATCGTCATCGACTGTGACGCGCGTGTC ACGCAGGTGCAGGTGTTCGAGCCCGGTGATGCGCTTGAACTGGCGCCTGTGAAAGGCGGCGGCGGTACCTGCTTCGCACC GCCGTTCGAGTGGGTGGAGGAACAGGGCTTTCGGCCGGCGTTTCTCGCCTATCTGACGGACATGTATGGCACGTTCCCCG AAGTGCCGCCGGAGTATCCGGTGCTGTGGGCCTCAACCACACCGTTGCGCAGAATCCATACCCCGCCATTCGGCGATTGC ATCGAGGTCATCGTCTGA
Upstream 100 bases:
>100_bases GATGGCGGTGTACATGACCGGCGCGCTCAGCACGCCGGCAGCACCGGCACTTGGCGATTCGTCTGCGCTCAGTTTCCTCC TTGCCTCGTGAGGTGTGGCC
Downstream 100 bases:
>100_bases CCATTGCCCCGGGCCATCCCGGGGCATTTCTTTGCTCCGGCATCGGTTGGTGGGTGTTCCGCCCAATTTGACCGCGTGCC GAAATCGATCAAAATTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MLERIIKQRGQLVLNHPFFGALALRLKPVEDPTCHTFWVDGRALGYNAQFVATLDDLELRGCLAHEVLHPASGHCWRRGN RDQKLWNAACDYAVNPVVLAANLKLPKGALLEERFTGKSAEEIYAVLRQERPPEAPQEPQAQGARGTGAGLPSRDPNASD AAQGQGAAEGGNADGSPTYEPGDIRKDRGNDQASTETQWKVAAMKAAQVAKMRGKFGADLQTVVDQLVTPAVDWRAALAR FASESAQADYSWSIPNRRFTHLGLYLPALHSRRVGDAVFVRDSSGSVFDETQRQFASEIHRVFDEVKPSRLIVIDCDARV TQVQVFEPGDALELAPVKGGGGTCFAPPFEWVEEQGFRPAFLAYLTDMYGTFPEVPPEYPVLWASTTPLRRIHTPPFGDC IEVIV
Sequences:
>Translated_405_residues MLERIIKQRGQLVLNHPFFGALALRLKPVEDPTCHTFWVDGRALGYNAQFVATLDDLELRGCLAHEVLHPASGHCWRRGN RDQKLWNAACDYAVNPVVLAANLKLPKGALLEERFTGKSAEEIYAVLRQERPPEAPQEPQAQGARGTGAGLPSRDPNASD AAQGQGAAEGGNADGSPTYEPGDIRKDRGNDQASTETQWKVAAMKAAQVAKMRGKFGADLQTVVDQLVTPAVDWRAALAR FASESAQADYSWSIPNRRFTHLGLYLPALHSRRVGDAVFVRDSSGSVFDETQRQFASEIHRVFDEVKPSRLIVIDCDARV TQVQVFEPGDALELAPVKGGGGTCFAPPFEWVEEQGFRPAFLAYLTDMYGTFPEVPPEYPVLWASTTPLRRIHTPPFGDC IEVIV >Mature_405_residues MLERIIKQRGQLVLNHPFFGALALRLKPVEDPTCHTFWVDGRALGYNAQFVATLDDLELRGCLAHEVLHPASGHCWRRGN RDQKLWNAACDYAVNPVVLAANLKLPKGALLEERFTGKSAEEIYAVLRQERPPEAPQEPQAQGARGTGAGLPSRDPNASD AAQGQGAAEGGNADGSPTYEPGDIRKDRGNDQASTETQWKVAAMKAAQVAKMRGKFGADLQTVVDQLVTPAVDWRAALAR FASESAQADYSWSIPNRRFTHLGLYLPALHSRRVGDAVFVRDSSGSVFDETQRQFASEIHRVFDEVKPSRLIVIDCDARV TQVQVFEPGDALELAPVKGGGGTCFAPPFEWVEEQGFRPAFLAYLTDMYGTFPEVPPEYPVLWASTTPLRRIHTPPFGDC IEVIV
Specific function: Unknown
COG id: COG3864
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44518; Mature: 44518
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERIIKQRGQLVLNHPFFGALALRLKPVEDPTCHTFWVDGRALGYNAQFVATLDDLELR CHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCEEEEECCEEECCCCEEEEEECCHHHH GCLAHEVLHPASGHCWRRGNRDQKLWNAACDYAVNPVVLAANLKLPKGALLEERFTGKSA HHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCH EEIYAVLRQERPPEAPQEPQAQGARGTGAGLPSRDPNASDAAQGQGAAEGGNADGSPTYE HHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC PGDIRKDRGNDQASTETQWKVAAMKAAQVAKMRGKFGADLQTVVDQLVTPAVDWRAALAR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH FASESAQADYSWSIPNRRFTHLGLYLPALHSRRVGDAVFVRDSSGSVFDETQRQFASEIH HHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHH RVFDEVKPSRLIVIDCDARVTQVQVFEPGDALELAPVKGGGGTCFAPPFEWVEEQGFRPA HHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCHH FLAYLTDMYGTFPEVPPEYPVLWASTTPLRRIHTPPFGDCIEVIV HHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHCC >Mature Secondary Structure MLERIIKQRGQLVLNHPFFGALALRLKPVEDPTCHTFWVDGRALGYNAQFVATLDDLELR CHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCEEEEECCEEECCCCEEEEEECCHHHH GCLAHEVLHPASGHCWRRGNRDQKLWNAACDYAVNPVVLAANLKLPKGALLEERFTGKSA HHHHHHHHCCCCCCHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCH EEIYAVLRQERPPEAPQEPQAQGARGTGAGLPSRDPNASDAAQGQGAAEGGNADGSPTYE HHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC PGDIRKDRGNDQASTETQWKVAAMKAAQVAKMRGKFGADLQTVVDQLVTPAVDWRAALAR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHH FASESAQADYSWSIPNRRFTHLGLYLPALHSRRVGDAVFVRDSSGSVFDETQRQFASEIH HHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHH RVFDEVKPSRLIVIDCDARVTQVQVFEPGDALELAPVKGGGGTCFAPPFEWVEEQGFRPA HHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCHH FLAYLTDMYGTFPEVPPEYPVLWASTTPLRRIHTPPFGDCIEVIV HHHHHHHHHCCCCCCCCCCCEEEECCCCHHHCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA