| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928704
Identifier: 187928704
GI number: 187928704
Start: 1704456
End: 1705520
Strand: Direct
Name: 187928704
Synonym: Rpic_1621
Alternate gene names: NA
Gene position: 1704456-1705520 (Clockwise)
Preceding gene: 187928703
Following gene: 187928705
Centisome position: 43.23
GC content: 63.85
Gene sequence:
>1065_bases ATGGACAATACCCTTACCGATCAAGTTACGCCCCTCACCAATCAGGTTTCCCCGTCGCAACTGGAGACCCTGTTGGCTGC CTACATTCCGGCACACCTGCCCGTGCTCGTGACTGGCGCGCCAGGTGTCGGGAAATCCGACATCGCAGCCGCGGCTGCAG AGCGCGCCGGCTACGACCTGCTGATCTCGCATCCGGTGGTCGAGGACCCGACAGACTCCAAGGGCCTGCCGTTCCCCGGC GCGGATGGCCAATCCGCCAGGTTCCTGCCGTTCGGGGATCTGGAGAGGGTGTTACACGCGAAAGAGCCGTTGGTCTGGTT CTTCGACGACCTCGGTCAAGCGTCTCAGGCGGTTCAAGCCGCCAAGATGCAACTGCTGCTCGCGCGCCGCATCGGCGAGC ACAAGCTTCCCGAGCATGTGACGTTCTTGGCGGCGACGAATCGCCGGACCGACAACGCCGGCGTGTCTGGCATTCTCGAT CCGGTGAAGTCGCGGTTTGCGACCATCGTCGAGCTTGTGCCAAACGTTGATGCCTGGGCGGCATGGGCTGTGAAGTCGCA GCTTCCCGCTGAACTGATCGCGTTCCTGCGCTTCAAGCCGGATCTGCTGGTGGCGAAGGAGCGCACGCGTGATATCGAGA ACCTGCCGTCGCCGCGAGGCTGGGGCGCGGTTGGGAAGCAGATGCCCGTGGTGCCAGCTGGCTTGGAAGCAATCGTGTTC ACCGGTGCTGTCGGCGCTGGTGCCGCGACCGAGTTCCAGGCGTTTCGCGAGACCTTTCGCAGTCTCCCCTCTGTGGCAAG CGTTCTGTTTGCGCCGGACACTGCCTCCATCCCGGAGGAGCCCTCGGCGCGCATCGGGATTGCGACGGCAGTTGCGAGTC AAACCACGGTCGCGAACATCGATCGCGTCCTCGTCTACGCCGACCGCATGCAAGCGGGCGGTGACGGTGACTGCGCAACG ATGATGATCAGCGACGCGATCCGCCGTGACGAGTCTATCGTTTCCGTGCCGGCTTTCATTGCAGCGCAATCCGGCTGGAT CGGTGCCGCGATGGACGGCCGGTAA
Upstream 100 bases:
>100_bases TCGATCCAACGCCGGCAGCATCGGCCGTTTCTTCAACCATCCCACAGGGGTCTACTCCCTGTGGGCGTGGATTCCGTGGG TTTTCGTCAAGTGATACCCC
Downstream 100 bases:
>100_bases ACCGGTTCCCTTTCAAGCAGTACATCCCATGCGGCGAGCTTTGGCTCGCCGCTTTTCATTTCAAGAGGCTATTTCCATGA ACATCCTCAACGTTCACGAG
Product: AAA ATPase
Products: NA
Alternate protein names: AAA ATPase; AAA Family ATPase; AAA ATPase Central Domain Protein; AAA_3 ATPase; MoxR-Like ATPase; ATPase Associated With Various Cellular; ATPase Family Protein; P-Loop ATPase; MoxR-Like Protein ATPase-Like Protein
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MDNTLTDQVTPLTNQVSPSQLETLLAAYIPAHLPVLVTGAPGVGKSDIAAAAAERAGYDLLISHPVVEDPTDSKGLPFPG ADGQSARFLPFGDLERVLHAKEPLVWFFDDLGQASQAVQAAKMQLLLARRIGEHKLPEHVTFLAATNRRTDNAGVSGILD PVKSRFATIVELVPNVDAWAAWAVKSQLPAELIAFLRFKPDLLVAKERTRDIENLPSPRGWGAVGKQMPVVPAGLEAIVF TGAVGAGAATEFQAFRETFRSLPSVASVLFAPDTASIPEEPSARIGIATAVASQTTVANIDRVLVYADRMQAGGDGDCAT MMISDAIRRDESIVSVPAFIAAQSGWIGAAMDGR
Sequences:
>Translated_354_residues MDNTLTDQVTPLTNQVSPSQLETLLAAYIPAHLPVLVTGAPGVGKSDIAAAAAERAGYDLLISHPVVEDPTDSKGLPFPG ADGQSARFLPFGDLERVLHAKEPLVWFFDDLGQASQAVQAAKMQLLLARRIGEHKLPEHVTFLAATNRRTDNAGVSGILD PVKSRFATIVELVPNVDAWAAWAVKSQLPAELIAFLRFKPDLLVAKERTRDIENLPSPRGWGAVGKQMPVVPAGLEAIVF TGAVGAGAATEFQAFRETFRSLPSVASVLFAPDTASIPEEPSARIGIATAVASQTTVANIDRVLVYADRMQAGGDGDCAT MMISDAIRRDESIVSVPAFIAAQSGWIGAAMDGR >Mature_354_residues MDNTLTDQVTPLTNQVSPSQLETLLAAYIPAHLPVLVTGAPGVGKSDIAAAAAERAGYDLLISHPVVEDPTDSKGLPFPG ADGQSARFLPFGDLERVLHAKEPLVWFFDDLGQASQAVQAAKMQLLLARRIGEHKLPEHVTFLAATNRRTDNAGVSGILD PVKSRFATIVELVPNVDAWAAWAVKSQLPAELIAFLRFKPDLLVAKERTRDIENLPSPRGWGAVGKQMPVVPAGLEAIVF TGAVGAGAATEFQAFRETFRSLPSVASVLFAPDTASIPEEPSARIGIATAVASQTTVANIDRVLVYADRMQAGGDGDCAT MMISDAIRRDESIVSVPAFIAAQSGWIGAAMDGR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37525; Mature: 37525
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNTLTDQVTPLTNQVSPSQLETLLAAYIPAHLPVLVTGAPGVGKSDIAAAAAERAGYDL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCEE LISHPVVEDPTDSKGLPFPGADGQSARFLPFGDLERVLHAKEPLVWFFDDLGQASQAVQA EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHH AKMQLLLARRIGEHKLPEHVTFLAATNRRTDNAGVSGILDPVKSRFATIVELVPNVDAWA HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH AWAVKSQLPAELIAFLRFKPDLLVAKERTRDIENLPSPRGWGAVGKQMPVVPAGLEAIVF HHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE TGAVGAGAATEFQAFRETFRSLPSVASVLFAPDTASIPEEPSARIGIATAVASQTTVANI ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHCCHHHHHH DRVLVYADRMQAGGDGDCATMMISDAIRRDESIVSVPAFIAAQSGWIGAAMDGR HHHEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHCCCCEEECCCCC >Mature Secondary Structure MDNTLTDQVTPLTNQVSPSQLETLLAAYIPAHLPVLVTGAPGVGKSDIAAAAAERAGYDL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCEE LISHPVVEDPTDSKGLPFPGADGQSARFLPFGDLERVLHAKEPLVWFFDDLGQASQAVQA EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHH AKMQLLLARRIGEHKLPEHVTFLAATNRRTDNAGVSGILDPVKSRFATIVELVPNVDAWA HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH AWAVKSQLPAELIAFLRFKPDLLVAKERTRDIENLPSPRGWGAVGKQMPVVPAGLEAIVF HHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE TGAVGAGAATEFQAFRETFRSLPSVASVLFAPDTASIPEEPSARIGIATAVASQTTVANI ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHCCHHHHHH DRVLVYADRMQAGGDGDCATMMISDAIRRDESIVSVPAFIAAQSGWIGAAMDGR HHHEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA