| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928705
Identifier: 187928705
GI number: 187928705
Start: 1705597
End: 1706520
Strand: Direct
Name: 187928705
Synonym: Rpic_1622
Alternate gene names: NA
Gene position: 1705597-1706520 (Clockwise)
Preceding gene: 187928704
Following gene: 187928706
Centisome position: 43.26
GC content: 60.17
Gene sequence:
>924_bases ATGAACATCCTCAACGTTCACGAGCGTGTCATGCTCGCATCCCTTGGCATCTCCGTTTGGCGCGCACGTCGCTTCGATAC CCGCGCCACGGAAGAGGTGGAAAAGAACCACGCCACCAAAGACATCGGGCGCTTCAACAAGAAGCTCCTGACCGACGATG CCATTTCTTACAAGAGCGTGTGCAGCATCGCCACGCAAGCACGTGCCTTCTTCAATGCGCACACCCTCGAATACGACCAG CTTGGCGTGCGTTTGCTGCCCACGGCTGTTTACCTAAAGGTCGCTGACCGGCTGCGCGAGTTTCAAGACGAGTTCCGTGA AGCCACGTCAGCCTTTCTCGCCGAATACCCAGCGTTGAAGGAGCAGGCCAAGGGTGCTCTCAACGGGCTCTATACCGAGG CGGACTACCCGACCCTCGAAGCGCTGTCGACCAAGTTCGGTATACGCCTGTCTCCCTTGCCGTTTCCGGACGCAAGCCAG TTCGGCATCAACTTGCCGGCCAACGTGCTGGACGGCATCAAGGCGGATATGGACGAGCGGGTGTTCAGCGCGGTCAAGAC GGCCAACGAAGACATCGTCGGCCGCCTCTACGACGCTGTGCAGCACTTCGCCAACCGTCTGTACGCGGGACGCAACGTCC GGCTGGGCGTTGTCGACAAGGTGCGCGAACTGTGTGACCTGCTTCCGACGTTGAACTTCACACAGGATCCGGCATTGACG GACATCCTGAACGAGACGCGCAATCACCTGGCTTGCTACACGGGCGCCGAATTGAAGGATTCGGCCGATCTTCGCCAGAA GGTGGCGGAGAAGGCGATGGAGATCGAGGCGCAGATGGCGGTGTACATGACCGGCGCGCTCAGCACGCCGGCAGCACCGG CACTTGGCGATTCGTCTGCGCTCAGTTTCCTCCTTGCCTCGTGA
Upstream 100 bases:
>100_bases GGTGCCGCGATGGACGGCCGGTAAACCGGTTCCCTTTCAAGCAGTACATCCCATGCGGCGAGCTTTGGCTCGCCGCTTTT CATTTCAAGAGGCTATTTCC
Downstream 100 bases:
>100_bases GGTGTGGCCATGCTCGAACGGATCATCAAGCAGCGTGGTCAACTGGTGCTGAACCACCCTTTCTTCGGGGCGCTGGCGCT TCGTCTGAAGCCTGTCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSVCSIATQARAFFNAHTLEYDQ LGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALKEQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQ FGINLPANVLDGIKADMDERVFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSALSFLLAS
Sequences:
>Translated_307_residues MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSVCSIATQARAFFNAHTLEYDQ LGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALKEQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQ FGINLPANVLDGIKADMDERVFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSALSFLLAS >Mature_307_residues MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSVCSIATQARAFFNAHTLEYDQ LGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALKEQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQ FGINLPANVLDGIKADMDERVFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSALSFLLAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33999; Mature: 33999
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSV CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSIATQARAFFNAHTLEYDQLGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALK HHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQFGINLPANVLDGIKADMDER HHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHH DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSA HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHH LSFLLAS HHHHHCC >Mature Secondary Structure MNILNVHERVMLASLGISVWRARRFDTRATEEVEKNHATKDIGRFNKKLLTDDAISYKSV CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSIATQARAFFNAHTLEYDQLGVRLLPTAVYLKVADRLREFQDEFREATSAFLAEYPALK HHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQAKGALNGLYTEADYPTLEALSTKFGIRLSPLPFPDASQFGINLPANVLDGIKADMDER HHHHHHHHHCCCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VFSAVKTANEDIVGRLYDAVQHFANRLYAGRNVRLGVVDKVRELCDLLPTLNFTQDPALT HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHH DILNETRNHLACYTGAELKDSADLRQKVAEKAMEIEAQMAVYMTGALSTPAAPALGDSSA HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHH LSFLLAS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA