| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187928652
Identifier: 187928652
GI number: 187928652
Start: 1656822
End: 1658042
Strand: Reverse
Name: 187928652
Synonym: Rpic_1568
Alternate gene names: NA
Gene position: 1658042-1656822 (Counterclockwise)
Preceding gene: 187928653
Following gene: 187928651
Centisome position: 42.05
GC content: 63.88
Gene sequence:
>1221_bases ATGATCAAGATCCGGATCGGCCCGTCCGACTTCGACCTTGCTGAGGTGCTGGAGAACCCGGGCCGCTACACAACCCAGCT CGAGCGCGCCAAGCGAATTCAAGGGTTCGCCGAGTGCGGCTGCACAGAGCATGCCCCTCGGCCGAAGCTCGTCATCCGGC GCCTCCGGTCGGCGTTCATCCTGGCGCGCTGGCCAGATGCCAACTACAAGCATCGTCAGGGGTGCCCGTTTCAGGAACGC AAAGGCCACGCCACGGCGACGGCAAGAACCAAGGGCCCATTCCAAACCCGGAACGGCAAGCACCTCATTCAGCTTGATCT GTCCTTGGAGGTTACACAGCCCGGCACCGGCCAGCCTGGCCCGCGATCACCCCAGGCCTCCAGTGCGCCGCGAGCGCATC GCCGATCGGCACCTCTCCTCGCATTTCTCGAATACGCCTGGGAGGCGGCTGGATTGCACGCGTGGGCCGATCAGGGATAC CGCGGTTGGAATGCATGCTGGTCCATGCTCAGTGCCGAGTTCGCCGACGCGAAAATCAACGGCCGCCCGGCAGCCGATGT GCTGCACATCATGCGCAGGTGGGACCCGGAACATAAGGCCGAGATCCTTGCCGAGTTCGATGCATTCGTCGCGCGGCTGA CCACTGCTGGCACCACGACGCACCGGGGGCTGATCATCGGCGAGGTCGGCGAGTTCAAACCGAGCGCTCACGGCGGCATG CTGGTGCTGCGCCAAAGCCACCAGCGGTATTTCATGTCCAATGCGCTGTTTCAGAAGGTCTCACGCTCCTACGCGACTGC GCTGGCCGGTCTCGGCCGCAAGGATTTGCGGAGCGTGGCGGTCCTGGCCGTCGAGAAGACCGCCAATGGCTACTTGCACG TCGCCGACATGGCAGCCATGTTGACCAACTCGTCCTTCCTGCCATGCGACTCGTCGCACGAGGCAGTCATGGCCGACCAC CTGATTCGCCTGCAGCGCAGGTTCGAGAAGCCACTGCGCCATGTGGGCGCCGCCGCAGTCCACCCGGACTTCGAGTTAAA GGATGTCGACCAGCGCACCGTTATCGAAGTGCTCGGCATGACCGGCAACCGCGAGTACGACCGGCGGATGCAGGAAAAGC GCGAGTACTACGCGACCAACGGTATCCGGTTGGTCGAATGGAACCCGAACAAACACCCCGTAGCGGACACCCGCCTCCCG CCGACACATCGAGACCGGTGA
Upstream 100 bases:
>100_bases ATGTCGCACTCACGCGCGCCAAGCGCAACCTGGACATCACTGCCATCCAAGTTGACATGCACAGAATGTTCCGGGATGCC GGGGTGTAAAGGGGCACACC
Downstream 100 bases:
>100_bases TGAAGACTCCACTGAACCGCTCTGCCGATGGCGCACGCATGCAACCAGGCGCCCCGCTCAGCTCACTCAAGTCGCCGGCG ATGACCGGTAACATCGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MIKIRIGPSDFDLAEVLENPGRYTTQLERAKRIQGFAECGCTEHAPRPKLVIRRLRSAFILARWPDANYKHRQGCPFQER KGHATATARTKGPFQTRNGKHLIQLDLSLEVTQPGTGQPGPRSPQASSAPRAHRRSAPLLAFLEYAWEAAGLHAWADQGY RGWNACWSMLSAEFADAKINGRPAADVLHIMRRWDPEHKAEILAEFDAFVARLTTAGTTTHRGLIIGEVGEFKPSAHGGM LVLRQSHQRYFMSNALFQKVSRSYATALAGLGRKDLRSVAVLAVEKTANGYLHVADMAAMLTNSSFLPCDSSHEAVMADH LIRLQRRFEKPLRHVGAAAVHPDFELKDVDQRTVIEVLGMTGNREYDRRMQEKREYYATNGIRLVEWNPNKHPVADTRLP PTHRDR
Sequences:
>Translated_406_residues MIKIRIGPSDFDLAEVLENPGRYTTQLERAKRIQGFAECGCTEHAPRPKLVIRRLRSAFILARWPDANYKHRQGCPFQER KGHATATARTKGPFQTRNGKHLIQLDLSLEVTQPGTGQPGPRSPQASSAPRAHRRSAPLLAFLEYAWEAAGLHAWADQGY RGWNACWSMLSAEFADAKINGRPAADVLHIMRRWDPEHKAEILAEFDAFVARLTTAGTTTHRGLIIGEVGEFKPSAHGGM LVLRQSHQRYFMSNALFQKVSRSYATALAGLGRKDLRSVAVLAVEKTANGYLHVADMAAMLTNSSFLPCDSSHEAVMADH LIRLQRRFEKPLRHVGAAAVHPDFELKDVDQRTVIEVLGMTGNREYDRRMQEKREYYATNGIRLVEWNPNKHPVADTRLP PTHRDR >Mature_406_residues MIKIRIGPSDFDLAEVLENPGRYTTQLERAKRIQGFAECGCTEHAPRPKLVIRRLRSAFILARWPDANYKHRQGCPFQER KGHATATARTKGPFQTRNGKHLIQLDLSLEVTQPGTGQPGPRSPQASSAPRAHRRSAPLLAFLEYAWEAAGLHAWADQGY RGWNACWSMLSAEFADAKINGRPAADVLHIMRRWDPEHKAEILAEFDAFVARLTTAGTTTHRGLIIGEVGEFKPSAHGGM LVLRQSHQRYFMSNALFQKVSRSYATALAGLGRKDLRSVAVLAVEKTANGYLHVADMAAMLTNSSFLPCDSSHEAVMADH LIRLQRRFEKPLRHVGAAAVHPDFELKDVDQRTVIEVLGMTGNREYDRRMQEKREYYATNGIRLVEWNPNKHPVADTRLP PTHRDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45692; Mature: 45692
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIRIGPSDFDLAEVLENPGRYTTQLERAKRIQGFAECGCTEHAPRPKLVIRRLRSAFI CEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEE LARWPDANYKHRQGCPFQERKGHATATARTKGPFQTRNGKHLIQLDLSLEVTQPGTGQPG EEECCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCC PRSPQASSAPRAHRRSAPLLAFLEYAWEAAGLHAWADQGYRGWNACWSMLSAEFADAKIN CCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCC GRPAADVLHIMRRWDPEHKAEILAEFDAFVARLTTAGTTTHRGLIIGEVGEFKPSAHGGM CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCE LVLRQSHQRYFMSNALFQKVSRSYATALAGLGRKDLRSVAVLAVEKTANGYLHVADMAAM EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCEEHHHHHHH LTNSSFLPCDSSHEAVMADHLIRLQRRFEKPLRHVGAAAVHPDFELKDVDQRTVIEVLGM HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHCC TGNREYDRRMQEKREYYATNGIRLVEWNPNKHPVADTRLPPTHRDR CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIKIRIGPSDFDLAEVLENPGRYTTQLERAKRIQGFAECGCTEHAPRPKLVIRRLRSAFI CEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEE LARWPDANYKHRQGCPFQERKGHATATARTKGPFQTRNGKHLIQLDLSLEVTQPGTGQPG EEECCCCCCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCC PRSPQASSAPRAHRRSAPLLAFLEYAWEAAGLHAWADQGYRGWNACWSMLSAEFADAKIN CCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCC GRPAADVLHIMRRWDPEHKAEILAEFDAFVARLTTAGTTTHRGLIIGEVGEFKPSAHGGM CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCE LVLRQSHQRYFMSNALFQKVSRSYATALAGLGRKDLRSVAVLAVEKTANGYLHVADMAAM EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCCCEEHHHHHHH LTNSSFLPCDSSHEAVMADHLIRLQRRFEKPLRHVGAAAVHPDFELKDVDQRTVIEVLGM HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHCC TGNREYDRRMQEKREYYATNGIRLVEWNPNKHPVADTRLPPTHRDR CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA