| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928650
Identifier: 187928650
GI number: 187928650
Start: 1654645
End: 1655415
Strand: Reverse
Name: 187928650
Synonym: Rpic_1566
Alternate gene names: NA
Gene position: 1655415-1654645 (Counterclockwise)
Preceding gene: 187928651
Following gene: 187928649
Centisome position: 41.99
GC content: 63.55
Gene sequence:
>771_bases ATGGCAGAGCAATTGATCGACGCAGCGCAAAGCACGCTGGCCAAGGCGCTGTCGGCACTGAGCCGTCGTGCCGACCGGGT GCACTCACAGCTCTGTGCTGCGCAGCGTATTCGCACGGCCTATCTCGCCGCGCAGGTCGGCATATTGGTGCCGGCCGTCT CTCGGTCGGTTGTTCGTTCGCTTCAGGTCAGGCTCCCCGCATTCATGACCTCCGACGTCATCGCGGAATTCCACCGCGGG CGCAAATTCCTTGCGGTGTTTCCCCGCAAGCAAACCCGTGAGTCGCTGTCGATCCTCCAATACGCGCTTACGGCGTATCT CAGTCAGATCCGCTACCAGGAATTGAAGGAATTCGACGCTGAAATTGCCCACCTGCGGGCCTACCTCACTGACTTGGAAC GCGCACGTGAGCAAGCGTCAGACCTTCTGCGGGTGCTCCAGGTGGTGCAGGATCGCGCCGCACCGGTTCCCTCCGAAGCG CAGCCGCTACTGGCTCGGATGGCTGGCGCTGGGGATCGACATTGCCGGCGCTCGAACGCCGGCACCGACGGTCGGCGCCG CGCGGCCAGTGCATTGGATGATCAAGACACGAACCTATGCGCGTTCGTGTTGGCAGAACTTCCCTCTCGTTTGGGGGAGC TTCTGACGCGCGACAAATCGGCGGCCTTCGACGCGTCGACCGAACGCCCTCGCGCTGGGCCGACCACTGGCTCGCCACGT TTGCCTGTTCCGGCACTCGACACGCTTGACGCGCAACTCGCGACGGCATGA
Upstream 100 bases:
>100_bases GCGCCGCTTCATGGTGACACGCGTGCCAGCGCTGGCCGCCGGCGACCTGCAGGTGGCCTGAACGACTGACTCCCGGGCGT ACACGACATCGGAGGATGGA
Downstream 100 bases:
>100_bases CCACCGAGCGGCTGGTGCCATCCCTTGACTTTGTACTGGGCTGGCTACGCTGATCTGAATCCATTGCCACCCGAGGCCAG CCGCCTCGCACACAATTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MAEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRSLQVRLPAFMTSDVIAEFHRG RKFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDAEIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEA QPLLARMAGAGDRHCRRSNAGTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPR LPVPALDTLDAQLATA
Sequences:
>Translated_256_residues MAEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRSLQVRLPAFMTSDVIAEFHRG RKFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDAEIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEA QPLLARMAGAGDRHCRRSNAGTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPR LPVPALDTLDAQLATA >Mature_255_residues AEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRSLQVRLPAFMTSDVIAEFHRGR KFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDAEIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEAQ PLLARMAGAGDRHCRRSNAGTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPRL PVPALDTLDAQLATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28043; Mature: 27912
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQVRLPAFMTSDVIAEFHRGRKFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDA HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEAQPLLARMAGAGDRHCRRSNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCC GTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPR CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC LPVPALDTLDAQLATA CCCCCHHHHHHHHHCC >Mature Secondary Structure AEQLIDAAQSTLAKALSALSRRADRVHSQLCAAQRIRTAYLAAQVGILVPAVSRSVVRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQVRLPAFMTSDVIAEFHRGRKFLAVFPRKQTRESLSILQYALTAYLSQIRYQELKEFDA HHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIAHLRAYLTDLERAREQASDLLRVLQVVQDRAAPVPSEAQPLLARMAGAGDRHCRRSNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHCCC GTDGRRRAASALDDQDTNLCAFVLAELPSRLGELLTRDKSAAFDASTERPRAGPTTGSPR CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCC LPVPALDTLDAQLATA CCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA