| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928649
Identifier: 187928649
GI number: 187928649
Start: 1652636
End: 1654543
Strand: Reverse
Name: 187928649
Synonym: Rpic_1565
Alternate gene names: NA
Gene position: 1654543-1652636 (Counterclockwise)
Preceding gene: 187928650
Following gene: 187928648
Centisome position: 41.97
GC content: 64.57
Gene sequence:
>1908_bases ATGAACACCTCCGCATCCTCCAGCCCTGCAGTCGCATGCGGTCCCGATGGCCGCGCCCGCGCGAACGCCACGCTCACCAT GGCGAAATGGATTCTGCTCAGCAGAGACCGCACCCTCGATCATGCTTGCGTCGAATGCGTGCCAGATGGCGCACTCGTTG TGCCAGGCTTTCGTTGCGGCTACCACTCCGCGCTGAATGCGGTGACCGCCGTAGATGATGCTGACCGACAGGAACCAGCG TACGCGCCGGTGCAAGCGGTGGTCGACCAGTTTGTGTCCGGATACCAGCTACACGGCACGCTGGGGTCCCATGTCCCGAC TCCACGGGAACGCGGGCTGATTGCCAACGCAATCGCTGGCCTGCTCGCCGACACGGTCTTCCTTCGAGAGTTCGACAAAT GGCGGCGTGCCGACGCCCCGCAAGCCAGCATGCCACCCGCGGCAGCAGTTCCCGCGGACTGTGCCGGTGCCGGTGAACCC TCCACCCTTCGCAACATGTTGGCCGCCATCAGGGTCGTCGGCCAGATTGACGGCCACGATGTGATACGTCGCCTGTCCAT GCTGGACCTTGTGGACCGCGAGAGGCGCGCAGCCGAGGAAGAGGCGCCAGCTGGCGCCATCGCCTTGTCCGATGCGCATG CGAAAGGCGTCATGGACGCGCTGCGCGGCGTTCACGAGCTGTTTGTCCATGAGGACGGTTGCGGTGCCTTGCCTCCTGAC AGCCCATTTCAGAATGGGGACCAGCCGTTCGGCCGGACCTCAAGAAAACCACAGCGAACAAGCGCAATGCTGAGCGAAAA ACATCACAACCCGCATAGGAGCGGCACGGAAGCCTATCTTGCAACCGAGCACCACAACGAAGGCTGGAACGGAGCATTGG CCGCCGTCCGCAAAGTCCTGGGCAGTAGTCTGGCGGCGGCGATCCACTACCCGGGCTGCTGGGACACAGCGGCATATCCG ACGATCGAAAGCGCACTGGCCGAGATGGGCGAGGAGTTTCAGTGCACGAACGATGATTGCCCCCACCACTCCGACCTACA GCAGGGCGAGCCGAGGGCGTTCGACGTGGCTGTGAGCGGATACAAAGTATTGCTGGTACGCACGCGCAGTGAAGCAGACG ACACCGCGAAGCATTTCCGAGGCCGTGGCTGTGAAGTCGAGGTGTACCCCTTGTACGGTGGCCAGCGGTTCCATACCTTG AAGGCCACCGACTTCTACGAGCTTGATCCGGACCGCAACGGCGAGCCCGGTACCGAGCCGGCACGCAACGTCACGCACCT AATGCCGGAGCCGTGGCCACCGGCGTTGAGTGGCGCCCCTGTCGTTCCGGCGACGCTGGAGGTTGACAATGCCGCGCTGG CTGCCGAGATCGACTGGTGTCTCGACGAAGGCCATTGCGGACCCCGCACCCGCGCTGTGCTGCAGCGAATCCGCGATCAT CAAACTGCGGGCATTACACCGGCGCGGCGCCCCATGCTGCTCATCACCCTCCGCCAGGCCGAGAGCCTGCAGCAGTTCTT CGGTGGTCACGACGCAGAGGTCGCCGTTGTGCCCTACAAGGACGGACTGCTCGCCTGGGACGTCGAGTGCCCCGGCGAGG GCTCTCAGTGGCTGGGGCCAACGGCGGTGGATGACGAGCTGGCCGACAAGGGCCGGCCGGACACGTCACGGCCCGCGATC TGGAAAACGACGCATCCCGCTGTGTGCGTGCCCATCACCGACAGCAAGGCGATCGCCGACGACTGGAAGGAGCATGGCTA CGACGTGGTCGAGTTCTACCCAGGACCCCAGGAGCTGCGATTGTGCGCTGACGGAGTCGGCACGGCCAACGCTGACGCCG ATGGCCACACAGTTTTGCGCGATACGCCCGGTGCTGCGTCGATTGACGCAGACGAGGGCCCACGCTGA
Upstream 100 bases:
>100_bases CACCGAGCGGCTGGTGCCATCCCTTGACTTTGTACTGGGCTGGCTACGCTGATCTGAATCCATTGCCACCCGAGGCCAGC CGCCTCGCACACAATTGACG
Downstream 100 bases:
>100_bases TGTGGGGGTTCCATATACACCTGGACATCGAGGGCTTCGTGCGGAGCAGCACGTACCCGGACGACTACATTGGCCTCTTC CGTGATGCCACCGGGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MNTSASSSPAVACGPDGRARANATLTMAKWILLSRDRTLDHACVECVPDGALVVPGFRCGYHSALNAVTAVDDADRQEPA YAPVQAVVDQFVSGYQLHGTLGSHVPTPRERGLIANAIAGLLADTVFLREFDKWRRADAPQASMPPAAAVPADCAGAGEP STLRNMLAAIRVVGQIDGHDVIRRLSMLDLVDRERRAAEEEAPAGAIALSDAHAKGVMDALRGVHELFVHEDGCGALPPD SPFQNGDQPFGRTSRKPQRTSAMLSEKHHNPHRSGTEAYLATEHHNEGWNGALAAVRKVLGSSLAAAIHYPGCWDTAAYP TIESALAEMGEEFQCTNDDCPHHSDLQQGEPRAFDVAVSGYKVLLVRTRSEADDTAKHFRGRGCEVEVYPLYGGQRFHTL KATDFYELDPDRNGEPGTEPARNVTHLMPEPWPPALSGAPVVPATLEVDNAALAAEIDWCLDEGHCGPRTRAVLQRIRDH QTAGITPARRPMLLITLRQAESLQQFFGGHDAEVAVVPYKDGLLAWDVECPGEGSQWLGPTAVDDELADKGRPDTSRPAI WKTTHPAVCVPITDSKAIADDWKEHGYDVVEFYPGPQELRLCADGVGTANADADGHTVLRDTPGAASIDADEGPR
Sequences:
>Translated_635_residues MNTSASSSPAVACGPDGRARANATLTMAKWILLSRDRTLDHACVECVPDGALVVPGFRCGYHSALNAVTAVDDADRQEPA YAPVQAVVDQFVSGYQLHGTLGSHVPTPRERGLIANAIAGLLADTVFLREFDKWRRADAPQASMPPAAAVPADCAGAGEP STLRNMLAAIRVVGQIDGHDVIRRLSMLDLVDRERRAAEEEAPAGAIALSDAHAKGVMDALRGVHELFVHEDGCGALPPD SPFQNGDQPFGRTSRKPQRTSAMLSEKHHNPHRSGTEAYLATEHHNEGWNGALAAVRKVLGSSLAAAIHYPGCWDTAAYP TIESALAEMGEEFQCTNDDCPHHSDLQQGEPRAFDVAVSGYKVLLVRTRSEADDTAKHFRGRGCEVEVYPLYGGQRFHTL KATDFYELDPDRNGEPGTEPARNVTHLMPEPWPPALSGAPVVPATLEVDNAALAAEIDWCLDEGHCGPRTRAVLQRIRDH QTAGITPARRPMLLITLRQAESLQQFFGGHDAEVAVVPYKDGLLAWDVECPGEGSQWLGPTAVDDELADKGRPDTSRPAI WKTTHPAVCVPITDSKAIADDWKEHGYDVVEFYPGPQELRLCADGVGTANADADGHTVLRDTPGAASIDADEGPR >Mature_635_residues MNTSASSSPAVACGPDGRARANATLTMAKWILLSRDRTLDHACVECVPDGALVVPGFRCGYHSALNAVTAVDDADRQEPA YAPVQAVVDQFVSGYQLHGTLGSHVPTPRERGLIANAIAGLLADTVFLREFDKWRRADAPQASMPPAAAVPADCAGAGEP STLRNMLAAIRVVGQIDGHDVIRRLSMLDLVDRERRAAEEEAPAGAIALSDAHAKGVMDALRGVHELFVHEDGCGALPPD SPFQNGDQPFGRTSRKPQRTSAMLSEKHHNPHRSGTEAYLATEHHNEGWNGALAAVRKVLGSSLAAAIHYPGCWDTAAYP TIESALAEMGEEFQCTNDDCPHHSDLQQGEPRAFDVAVSGYKVLLVRTRSEADDTAKHFRGRGCEVEVYPLYGGQRFHTL KATDFYELDPDRNGEPGTEPARNVTHLMPEPWPPALSGAPVVPATLEVDNAALAAEIDWCLDEGHCGPRTRAVLQRIRDH QTAGITPARRPMLLITLRQAESLQQFFGGHDAEVAVVPYKDGLLAWDVECPGEGSQWLGPTAVDDELADKGRPDTSRPAI WKTTHPAVCVPITDSKAIADDWKEHGYDVVEFYPGPQELRLCADGVGTANADADGHTVLRDTPGAASIDADEGPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68320; Mature: 68320
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSASSSPAVACGPDGRARANATLTMAKWILLSRDRTLDHACVECVPDGALVVPGFRCG CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCCCC YHSALNAVTAVDDADRQEPAYAPVQAVVDQFVSGYQLHGTLGSHVPTPRERGLIANAIAG HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCHHCCHHHHHHHH LLADTVFLREFDKWRRADAPQASMPPAAAVPADCAGAGEPSTLRNMLAAIRVVGQIDGHD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH VIRRLSMLDLVDRERRAAEEEAPAGAIALSDAHAKGVMDALRGVHELFVHEDGCGALPPD HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHEECCCCCCCCCC SPFQNGDQPFGRTSRKPQRTSAMLSEKHHNPHRSGTEAYLATEHHNEGWNGALAAVRKVL CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH GSSLAAAIHYPGCWDTAAYPTIESALAEMGEEFQCTNDDCPHHSDLQQGEPRAFDVAVSG HHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEEECC YKVLLVRTRSEADDTAKHFRGRGCEVEVYPLYGGQRFHTLKATDFYELDPDRNGEPGTEP EEEEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCH ARNVTHLMPEPWPPALSGAPVVPATLEVDNAALAAEIDWCLDEGHCGPRTRAVLQRIRDH HHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHC QTAGITPARRPMLLITLRQAESLQQFFGGHDAEVAVVPYKDGLLAWDVECPGEGSQWLGP CCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCC TAVDDELADKGRPDTSRPAIWKTTHPAVCVPITDSKAIADDWKEHGYDVVEFYPGPQELR CCCCHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCHHHHH LCADGVGTANADADGHTVLRDTPGAASIDADEGPR HHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNTSASSSPAVACGPDGRARANATLTMAKWILLSRDRTLDHACVECVPDGALVVPGFRCG CCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCCCC YHSALNAVTAVDDADRQEPAYAPVQAVVDQFVSGYQLHGTLGSHVPTPRERGLIANAIAG HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCHHCCHHHHHHHH LLADTVFLREFDKWRRADAPQASMPPAAAVPADCAGAGEPSTLRNMLAAIRVVGQIDGHD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH VIRRLSMLDLVDRERRAAEEEAPAGAIALSDAHAKGVMDALRGVHELFVHEDGCGALPPD HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHEECCCCCCCCCC SPFQNGDQPFGRTSRKPQRTSAMLSEKHHNPHRSGTEAYLATEHHNEGWNGALAAVRKVL CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH GSSLAAAIHYPGCWDTAAYPTIESALAEMGEEFQCTNDDCPHHSDLQQGEPRAFDVAVSG HHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEEEEEECC YKVLLVRTRSEADDTAKHFRGRGCEVEVYPLYGGQRFHTLKATDFYELDPDRNGEPGTEP EEEEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCH ARNVTHLMPEPWPPALSGAPVVPATLEVDNAALAAEIDWCLDEGHCGPRTRAVLQRIRDH HHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHC QTAGITPARRPMLLITLRQAESLQQFFGGHDAEVAVVPYKDGLLAWDVECPGEGSQWLGP CCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCCCCCCC TAVDDELADKGRPDTSRPAIWKTTHPAVCVPITDSKAIADDWKEHGYDVVEFYPGPQELR CCCCHHHHHCCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEECCCHHHHH LCADGVGTANADADGHTVLRDTPGAASIDADEGPR HHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA