| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928618
Identifier: 187928618
GI number: 187928618
Start: 1626689
End: 1627399
Strand: Direct
Name: 187928618
Synonym: Rpic_1534
Alternate gene names: NA
Gene position: 1626689-1627399 (Clockwise)
Preceding gene: 187928617
Following gene: 187928619
Centisome position: 41.26
GC content: 60.76
Gene sequence:
>711_bases ATGATGAATCGACATTTCTTGTCTGCAGCGGTTGGACTTGCGCTGAGCGCCGGTGCAGGATTTGCAATTGCGCAGGGTGC CTCGGCGCCTCGCATGGAGAAGGCGATGCAGGCCGCTCAATCCATTCGTGATGCGCAGCCTTCGGCAACAACAACTCCGC CAACGACAACACCTGCGGCTCGTACCGCGCAAGTTGCAGAAACGTCTGTACGGCCAACCCAGGCTGCTCCATCACCCCAG GCGTCGATTCCTGTTGCGGCTGCGCCTTCGCCGAAGACCGAAGCCGCTCAGGCAGGTGCTGAGGCCGACGAACTCAGCAT CCTGCAACGGCAAGCGGCAGTCCTGAAGGTCAAGGCTGAAATTGCGAAGTACCAGGCGGACATCAAAAGCTCGGAGTCGC GCGCGATGCAGGCTGCAACGAGCGTGACGCCTGGGCAGGCAGGGGAACCGGGAGTTGTTCCGTCGCTGGTCGTTCCCGGC AACGTTACGAAGCCACCGATTCCGCTACCTGCGGCCAAACATGGGAAACCGCGTCTGGTTCACATCGGGGGAGCTGACGG CGTCTACTCGGCTCTCATCGAAATCAACGGCATCACGATTTCGGATGCAGTGGCTGGCACTCAGCTCGGCGATGGCTGGC AAGTCATCGGCGTCGATGCGAAACAAGTCAGAGTGGGTCGCGGCAAGCAAGTTCTGAAGCTCGCGGTGTGA
Upstream 100 bases:
>100_bases GCCCTACGTCCCAGTGACGGGCGGTGGGGTGGATGCCGCAAAGCGCGAAACGATGATTGCCGTCGTTATCACCGCACGGC TTCTTTGATACCTGGGGTTC
Downstream 100 bases:
>100_bases CATGGCTCAAGTCCTCAACCTTCCAGGGATCAAGGGCACCTATGCCGTCGGCCTGACTTGGCGGCATGAGGATGCCAGGC CAAGCCGCGCGGCACTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MMNRHFLSAAVGLALSAGAGFAIAQGASAPRMEKAMQAAQSIRDAQPSATTTPPTTTPAARTAQVAETSVRPTQAAPSPQ ASIPVAAAPSPKTEAAQAGAEADELSILQRQAAVLKVKAEIAKYQADIKSSESRAMQAATSVTPGQAGEPGVVPSLVVPG NVTKPPIPLPAAKHGKPRLVHIGGADGVYSALIEINGITISDAVAGTQLGDGWQVIGVDAKQVRVGRGKQVLKLAV
Sequences:
>Translated_236_residues MMNRHFLSAAVGLALSAGAGFAIAQGASAPRMEKAMQAAQSIRDAQPSATTTPPTTTPAARTAQVAETSVRPTQAAPSPQ ASIPVAAAPSPKTEAAQAGAEADELSILQRQAAVLKVKAEIAKYQADIKSSESRAMQAATSVTPGQAGEPGVVPSLVVPG NVTKPPIPLPAAKHGKPRLVHIGGADGVYSALIEINGITISDAVAGTQLGDGWQVIGVDAKQVRVGRGKQVLKLAV >Mature_236_residues MMNRHFLSAAVGLALSAGAGFAIAQGASAPRMEKAMQAAQSIRDAQPSATTTPPTTTPAARTAQVAETSVRPTQAAPSPQ ASIPVAAAPSPKTEAAQAGAEADELSILQRQAAVLKVKAEIAKYQADIKSSESRAMQAATSVTPGQAGEPGVVPSLVVPG NVTKPPIPLPAAKHGKPRLVHIGGADGVYSALIEINGITISDAVAGTQLGDGWQVIGVDAKQVRVGRGKQVLKLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23854; Mature: 23854
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNRHFLSAAVGLALSAGAGFAIAQGASAPRMEKAMQAAQSIRDAQPSATTTPPTTTPAA CCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH RTAQVAETSVRPTQAAPSPQASIPVAAAPSPKTEAAQAGAEADELSILQRQAAVLKVKAE HHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH IAKYQADIKSSESRAMQAATSVTPGQAGEPGVVPSLVVPGNVTKPPIPLPAAKHGKPRLV HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEE HIGGADGVYSALIEINGITISDAVAGTQLGDGWQVIGVDAKQVRVGRGKQVLKLAV EECCCCHHHEEHEEECCEEEECCCCCCCCCCCEEEEECCHHHEECCCCCEEEEECC >Mature Secondary Structure MMNRHFLSAAVGLALSAGAGFAIAQGASAPRMEKAMQAAQSIRDAQPSATTTPPTTTPAA CCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH RTAQVAETSVRPTQAAPSPQASIPVAAAPSPKTEAAQAGAEADELSILQRQAAVLKVKAE HHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH IAKYQADIKSSESRAMQAATSVTPGQAGEPGVVPSLVVPGNVTKPPIPLPAAKHGKPRLV HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEE HIGGADGVYSALIEINGITISDAVAGTQLGDGWQVIGVDAKQVRVGRGKQVLKLAV EECCCCHHHEEHEEECCEEEECCCCCCCCCCCEEEEECCHHHEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA