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The map label for this gene is yjgI [C]

Identifier: 187928555

GI number: 187928555

Start: 1563798

End: 1564382

Strand: Reverse

Name: yjgI [C]

Synonym: Rpic_1471

Alternate gene names: 187928555

Gene position: 1564382-1563798 (Counterclockwise)

Preceding gene: 187928556

Following gene: 187928541

Centisome position: 39.68

GC content: 64.96

Gene sequence:

>585_bases
TTGCAGCTTGACACCGGCAAGATCGCCACGTTCCCCGCCTTTGCCGAGGCCGTGCACGGCGTGCTGACGCAGTGGAAGGC
CGAGCGCTTCGATTACCTCGTCAACAACGCCGGCGTGGGCGTGCACGCCACGGTGGCCGAAACCACTGAAGCCCAGTTCG
ACGAACTGATGAATGTGCATTTCAAAGGCGTGTTCTTCCTCACGCAGATCCTGCTGCCGCTCATGGCTGACGGCGGGCGC
ATCGTCAATATCTCGTCGGGGCTGGCGCGTTTTGCGCTGCCGGGCTACGGCGCGTATGCGGCAATGAAGGGCGCGGTGGA
GGTGCTGACGCGGTATCTGGCGAAGGAACTCGGCCCGCGCGGCATTGCCGTGAACGTGGTGGCGCCGGGCGCCATCGAGA
CGGACTTTGGTGGCGGTGCGGTGCGCGACAACGCGGGCCTCAATGCCATGGTGGCGGCCAATACGGCGCTGGGACGCGCT
GGTGTGCCGGACGATATTGGCGGCGTGGTGGCCTCGCTGCTGTCGCCGGACAACCGGTGGATCAATGCGCAGCGTATTGA
AGCTTCGGGCGGGATGTTCCTCTAA

Upstream 100 bases:

>100_bases
ACGCCGCACCTGTCGTCCAAAGTGCATAACACGCTCTAACCGCGCTGAAGCCGATGCCCTCGTCGCCGAACTGACAGCCC
AGGGCCGCCGTGCCGCTGCC

Downstream 100 bases:

>100_bases
GCACGCCCGTCCAAGGGCATGGCGTTCAGAACGCCAACTGCCGAGCTCTGAGCGCCGTGCGAAGAGCTTCGCGTGTCGAG
TTCTGAACTGGAAGTGCCCA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: ORFC [H]

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MQLDTGKIATFPAFAEAVHGVLTQWKAERFDYLVNNAGVGVHATVAETTEAQFDELMNVHFKGVFFLTQILLPLMADGGR
IVNISSGLARFALPGYGAYAAMKGAVEVLTRYLAKELGPRGIAVNVVAPGAIETDFGGGAVRDNAGLNAMVAANTALGRA
GVPDDIGGVVASLLSPDNRWINAQRIEASGGMFL

Sequences:

>Translated_194_residues
MQLDTGKIATFPAFAEAVHGVLTQWKAERFDYLVNNAGVGVHATVAETTEAQFDELMNVHFKGVFFLTQILLPLMADGGR
IVNISSGLARFALPGYGAYAAMKGAVEVLTRYLAKELGPRGIAVNVVAPGAIETDFGGGAVRDNAGLNAMVAANTALGRA
GVPDDIGGVVASLLSPDNRWINAQRIEASGGMFL
>Mature_194_residues
MQLDTGKIATFPAFAEAVHGVLTQWKAERFDYLVNNAGVGVHATVAETTEAQFDELMNVHFKGVFFLTQILLPLMADGGR
IVNISSGLARFALPGYGAYAAMKGAVEVLTRYLAKELGPRGIAVNVVAPGAIETDFGGGAVRDNAGLNAMVAANTALGRA
GVPDDIGGVVASLLSPDNRWINAQRIEASGGMFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=165, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI5031737, Length=163, Percent_Identity=36.1963190184049, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI7705925, Length=116, Percent_Identity=37.9310344827586, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI15277342, Length=165, Percent_Identity=32.7272727272727, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI126723750, Length=182, Percent_Identity=29.1208791208791, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI20149619, Length=134, Percent_Identity=34.3283582089552, Blast_Score=68, Evalue=5e-12,
Organism=Homo sapiens, GI59889578, Length=156, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI2367365, Length=180, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1787335, Length=190, Percent_Identity=33.1578947368421, Blast_Score=84, Evalue=4e-18,
Organism=Escherichia coli, GI1790717, Length=167, Percent_Identity=31.1377245508982, Blast_Score=80, Evalue=7e-17,
Organism=Escherichia coli, GI1789208, Length=166, Percent_Identity=31.9277108433735, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1788459, Length=197, Percent_Identity=32.48730964467, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1789378, Length=152, Percent_Identity=32.8947368421053, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI2367175, Length=168, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI87082160, Length=175, Percent_Identity=31.4285714285714, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786701, Length=139, Percent_Identity=35.9712230215827, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI87082100, Length=179, Percent_Identity=31.2849162011173, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=167, Percent_Identity=33.5329341317365, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=173, Percent_Identity=31.7919075144509, Blast_Score=82, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71994604, Length=173, Percent_Identity=30.0578034682081, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=179, Percent_Identity=34.6368715083799, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI115534694, Length=115, Percent_Identity=37.3913043478261, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=159, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=168, Percent_Identity=30.952380952381, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=166, Percent_Identity=28.3132530120482, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=193, Percent_Identity=31.0880829015544, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=192, Percent_Identity=31.25, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=199, Percent_Identity=32.1608040201005, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24643142, Length=192, Percent_Identity=35.9375, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28571526, Length=173, Percent_Identity=35.8381502890173, Blast_Score=89, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21357041, Length=180, Percent_Identity=34.4444444444444, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24639444, Length=164, Percent_Identity=34.7560975609756, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355319, Length=167, Percent_Identity=34.7305389221557, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24644339, Length=167, Percent_Identity=31.7365269461078, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24644337, Length=184, Percent_Identity=33.1521739130435, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21358495, Length=180, Percent_Identity=31.1111111111111, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI23397609, Length=115, Percent_Identity=34.7826086956522, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 20307; Mature: 20307

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDTGKIATFPAFAEAVHGVLTQWKAERFDYLVNNAGVGVHATVAETTEAQFDELMNVH
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH
FKGVFFLTQILLPLMADGGRIVNISSGLARFALPGYGAYAAMKGAVEVLTRYLAKELGPR
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GIAVNVVAPGAIETDFGGGAVRDNAGLNAMVAANTALGRAGVPDDIGGVVASLLSPDNRW
CEEEEEECCCCEECCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCE
INAQRIEASGGMFL
ECCEEEECCCCCCC
>Mature Secondary Structure
MQLDTGKIATFPAFAEAVHGVLTQWKAERFDYLVNNAGVGVHATVAETTEAQFDELMNVH
CCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH
FKGVFFLTQILLPLMADGGRIVNISSGLARFALPGYGAYAAMKGAVEVLTRYLAKELGPR
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GIAVNVVAPGAIETDFGGGAVRDNAGLNAMVAANTALGRAGVPDDIGGVVASLLSPDNRW
CEEEEEECCCCEECCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCE
INAQRIEASGGMFL
ECCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868443 [H]