The gene/protein map for NC_010682 is currently unavailable.
Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is braF [H]

Identifier: 187928537

GI number: 187928537

Start: 1541760

End: 1542560

Strand: Reverse

Name: braF [H]

Synonym: Rpic_1451

Alternate gene names: 187928537

Gene position: 1542560-1541760 (Counterclockwise)

Preceding gene: 187928538

Following gene: 187928536

Centisome position: 39.13

GC content: 63.42

Gene sequence:

>801_bases
ATGAGCCAACTGACATCCGGGCCGACCGCCGCGCTCGAGTTGCGCGACGTTCGCAAGCGCTTTGGCGCGACCGAAATCAT
TCGAGGGGTCAACCTCACCATCGGCAAGGGCGAGCGCCATGCGCTCATCGGCCCGAACGGCGCCGGCAAATCGACCACGT
TCAACCTGATCTCGGGCCGCTTCCCGGCCAGCTCGGGCAGCGTGCGCCTGAACGGCGAAGAGATCAGCGGCCTGGCGCCC
TTCGAGATCAACCGCAAGGGCCTGTCGCGCAGCTTCCAGATCACCAACATCTTTCATCGCTTGTCGGTGTTCGAGAACCT
GCGCTGCGCGGTGCTCTGGTCGCTTGGCTACAAGTATTCGTTCTGGCACAAGCTGGCCGAACTGCGCGACGCACGCGAGC
GCGCGGAAGAAGTGCTCGAGCAGATCGGCATGACACATCGGCGTGACGCCGCCGCAGGCCTGCTGACGTACGCCGAGCAA
CGGGCGCTGGAAATCGGCATCACCATCGCGGGCGGCGCCGATGTGATTTTGCTGGATGAACCCACGGCCGGCATGAGCCG
CTCCGAATCCGACCATGCGGTCGAGCTTATCCGCAAGGTCACTGTGGGCAAGACGCTGGTGATGGTCGAGCACGACATGA
GCGTGGTGTTTGGCCTCGCCGACCGCATCTCGGTACTCGTCTATGGCGAAGTGATCGCCACCGACACACCCGAAGCCATT
CGCAACAACCGGCGCGTGAAGGAAGCCTACCTCGGCACCACGCTGGACGCGAATGAAACCGAATCTGCAGGAGCGCATTG
A

Upstream 100 bases:

>100_bases
TTGTCACCGCCGCGCTGTGGCTGGTGGGCGCCTTCGGCCTGCGTGCTGCAGCGGGCAAGCTGCGCGCCGCTTGGGACAAC
GCATTGCAGGAGCCGCAACC

Downstream 100 bases:

>100_bases
TGGCAACGAATACTCCGATGTTGGAGGTGCGCGACCTGCACGCGTACTACGGCAAGAGCCACATCCTGCACGGCGTCGAC
ATGCATGTGGGCGAGGGCGA

Product: ABC transporter-like protein

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSQLTSGPTAALELRDVRKRFGATEIIRGVNLTIGKGERHALIGPNGAGKSTTFNLISGRFPASSGSVRLNGEEISGLAP
FEINRKGLSRSFQITNIFHRLSVFENLRCAVLWSLGYKYSFWHKLAELRDARERAEEVLEQIGMTHRRDAAAGLLTYAEQ
RALEIGITIAGGADVILLDEPTAGMSRSESDHAVELIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAI
RNNRRVKEAYLGTTLDANETESAGAH

Sequences:

>Translated_266_residues
MSQLTSGPTAALELRDVRKRFGATEIIRGVNLTIGKGERHALIGPNGAGKSTTFNLISGRFPASSGSVRLNGEEISGLAP
FEINRKGLSRSFQITNIFHRLSVFENLRCAVLWSLGYKYSFWHKLAELRDARERAEEVLEQIGMTHRRDAAAGLLTYAEQ
RALEIGITIAGGADVILLDEPTAGMSRSESDHAVELIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAI
RNNRRVKEAYLGTTLDANETESAGAH
>Mature_265_residues
SQLTSGPTAALELRDVRKRFGATEIIRGVNLTIGKGERHALIGPNGAGKSTTFNLISGRFPASSGSVRLNGEEISGLAPF
EINRKGLSRSFQITNIFHRLSVFENLRCAVLWSLGYKYSFWHKLAELRDARERAEEVLEQIGMTHRRDAAAGLLTYAEQR
ALEIGITIAGGADVILLDEPTAGMSRSESDHAVELIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAIR
NNRRVKEAYLGTTLDANETESAGAH

Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]

COG id: COG0411

COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI105990541, Length=215, Percent_Identity=30.2325581395349, Blast_Score=104, Evalue=9e-23,
Organism=Homo sapiens, GI150417984, Length=256, Percent_Identity=29.6875, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI27881501, Length=229, Percent_Identity=28.3842794759825, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI30795238, Length=229, Percent_Identity=28.3842794759825, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI116734710, Length=205, Percent_Identity=31.219512195122, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI45446740, Length=213, Percent_Identity=28.6384976525822, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI47078218, Length=213, Percent_Identity=28.6384976525822, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI27436953, Length=227, Percent_Identity=29.0748898678414, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI153792144, Length=225, Percent_Identity=28.8888888888889, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI21536376, Length=229, Percent_Identity=27.0742358078603, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI31657092, Length=245, Percent_Identity=25.3061224489796, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI27262624, Length=212, Percent_Identity=29.7169811320755, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI27262626, Length=212, Percent_Identity=29.7169811320755, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI27477115, Length=181, Percent_Identity=30.3867403314917, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI11967969, Length=225, Percent_Identity=24.8888888888889, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1789864, Length=248, Percent_Identity=36.6935483870968, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1789593, Length=247, Percent_Identity=32.7935222672065, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787792, Length=232, Percent_Identity=29.3103448275862, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788472, Length=225, Percent_Identity=28.4444444444444, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI87082268, Length=243, Percent_Identity=30.8641975308642, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790525, Length=243, Percent_Identity=27.1604938271605, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789672, Length=241, Percent_Identity=26.5560165975104, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1788210, Length=231, Percent_Identity=29.004329004329, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=25.7777777777778, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87081709, Length=253, Percent_Identity=28.0632411067194, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787712, Length=252, Percent_Identity=25, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI87081791, Length=239, Percent_Identity=28.0334728033473, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789991, Length=226, Percent_Identity=27.8761061946903, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787105, Length=240, Percent_Identity=27.0833333333333, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1790467, Length=237, Percent_Identity=28.2700421940928, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1786319, Length=247, Percent_Identity=28.7449392712551, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI48995001, Length=247, Percent_Identity=27.1255060728745, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788450, Length=230, Percent_Identity=27.3913043478261, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788761, Length=232, Percent_Identity=23.7068965517241, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1786703, Length=229, Percent_Identity=29.2576419213974, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI48994943, Length=265, Percent_Identity=27.9245283018868, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790739, Length=226, Percent_Identity=30.5309734513274, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787029, Length=234, Percent_Identity=24.7863247863248, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786398, Length=233, Percent_Identity=24.8927038626609, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87081834, Length=222, Percent_Identity=27.4774774774775, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI87081782, Length=243, Percent_Identity=27.9835390946502, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788897, Length=219, Percent_Identity=26.027397260274, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787370, Length=243, Percent_Identity=25.1028806584362, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1786345, Length=253, Percent_Identity=24.1106719367589, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788225, Length=240, Percent_Identity=25.4166666666667, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1789586, Length=243, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790544, Length=238, Percent_Identity=28.9915966386555, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1789032, Length=226, Percent_Identity=25.6637168141593, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1786253, Length=226, Percent_Identity=26.1061946902655, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788644, Length=246, Percent_Identity=26.0162601626016, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786872, Length=232, Percent_Identity=24.1379310344828, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1786803, Length=233, Percent_Identity=25.3218884120172, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786563, Length=222, Percent_Identity=24.7747747747748, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87082267, Length=232, Percent_Identity=25.4310344827586, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787758, Length=237, Percent_Identity=26.5822784810127, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787089, Length=228, Percent_Identity=25.4385964912281, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789873, Length=199, Percent_Identity=25.6281407035176, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787500, Length=259, Percent_Identity=22.3938223938224, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787112, Length=231, Percent_Identity=28.1385281385281, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=216, Percent_Identity=30.5555555555556, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17510237, Length=241, Percent_Identity=29.4605809128631, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71983510, Length=233, Percent_Identity=26.6094420600858, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71983523, Length=233, Percent_Identity=26.6094420600858, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71983516, Length=233, Percent_Identity=26.6094420600858, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115533608, Length=221, Percent_Identity=27.6018099547511, Blast_Score=82, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324498, Length=201, Percent_Identity=28.8557213930348, Blast_Score=72, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6319856, Length=235, Percent_Identity=25.1063829787234, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24643674, Length=227, Percent_Identity=28.6343612334802, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI116007184, Length=217, Percent_Identity=27.1889400921659, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI221500365, Length=217, Percent_Identity=27.1889400921659, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19920532, Length=218, Percent_Identity=29.3577981651376, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24580930, Length=218, Percent_Identity=29.3577981651376, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI221512771, Length=244, Percent_Identity=27.4590163934426, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24666092, Length=228, Percent_Identity=25, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI28574744, Length=211, Percent_Identity=29.8578199052133, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007328, Length=253, Percent_Identity=25.296442687747, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574150, Length=253, Percent_Identity=25.296442687747, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24662800, Length=241, Percent_Identity=26.1410788381743, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161076684, Length=241, Percent_Identity=28.2157676348548, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24581617, Length=241, Percent_Identity=28.2157676348548, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24581615, Length=241, Percent_Identity=28.2157676348548, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI161076682, Length=241, Percent_Identity=28.2157676348548, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI28571209, Length=244, Percent_Identity=25, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24581191, Length=225, Percent_Identity=24.8888888888889, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24581189, Length=225, Percent_Identity=24.8888888888889, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24581193, Length=225, Percent_Identity=24.8888888888889, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24581195, Length=225, Percent_Identity=24.8888888888889, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI85724864, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24580555, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI85816269, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24580553, Length=216, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648314, Length=227, Percent_Identity=22.9074889867841, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574533, Length=214, Percent_Identity=27.5700934579439, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI85724858, Length=212, Percent_Identity=28.7735849056604, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85724856, Length=212, Percent_Identity=28.7735849056604, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580547, Length=212, Percent_Identity=28.7735849056604, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580551, Length=212, Percent_Identity=28.7735849056604, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580549, Length=212, Percent_Identity=28.7735849056604, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580545, Length=212, Percent_Identity=28.7735849056604, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 29049; Mature: 28918

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSQLTSGPTAALELRDVRKRFGATEIIRGVNLTIGKGERHALIGPNGAGKSTTFNLISGR
CCCCCCCCCHHHHHHHHHHHHCHHHHHHCCEEEECCCCCEEEECCCCCCCCEEEEEEECC
FPASSGSVRLNGEEISGLAPFEINRKGLSRSFQITNIFHRLSVFENLRCAVLWSLGYKYS
CCCCCCCEEECCHHCCCCCCCEECCCCCCCEEHHHHHHHHHHHHHCCCEEEEECCCCCHH
FWHKLAELRDARERAEEVLEQIGMTHRRDAAAGLLTYAEQRALEIGITIAGGADVILLDE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCEEEEECC
PTAGMSRSESDHAVELIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAI
CCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHEEEEEEEEEEECCCHHHH
RNNRRVKEAYLGTTLDANETESAGAH
HCCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQLTSGPTAALELRDVRKRFGATEIIRGVNLTIGKGERHALIGPNGAGKSTTFNLISGR
CCCCCCCCHHHHHHHHHHHHCHHHHHHCCEEEECCCCCEEEECCCCCCCCEEEEEEECC
FPASSGSVRLNGEEISGLAPFEINRKGLSRSFQITNIFHRLSVFENLRCAVLWSLGYKYS
CCCCCCCEEECCHHCCCCCCCEECCCCCCCEEHHHHHHHHHHHHHCCCEEEEECCCCCHH
FWHKLAELRDARERAEEVLEQIGMTHRRDAAAGLLTYAEQRALEIGITIAGGADVILLDE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCEEEEECC
PTAGMSRSESDHAVELIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAI
CCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHEEEEEEEEEEECCCHHHH
RNNRRVKEAYLGTTLDANETESAGAH
HCCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2120183; 10984043 [H]