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The map label for this gene is 187928516

Identifier: 187928516

GI number: 187928516

Start: 1518546

End: 1519448

Strand: Reverse

Name: 187928516

Synonym: Rpic_1430

Alternate gene names: NA

Gene position: 1519448-1518546 (Counterclockwise)

Preceding gene: 187928518

Following gene: 187928512

Centisome position: 38.54

GC content: 63.46

Gene sequence:

>903_bases
ATGAGTTCGCACATGGAGCACGCGCTGATCGTCGCCTGCATCCTCGGATTTGCCGCCATGGAGTTCGTGACACGGCGCTA
CCAAGCCAACGTGCGCGGCCGCGCCACGGCCAACGATGCCTGGCTGGAAGTGCTGATGTTCATCAGCCTCGTTGCAGTGA
CGCAGCCGATCGCGCTGCTGGGCAGCAATGCACTCTGTAACTGGCTCATTCCGGCGCAGCACAACGCGTGGGCGGATCTG
CCCTGGTGGGCGATGACGGGGTTGTTGCTGATCGGCGACGACCTCACGCAATACCTCTGGCACCGTGCTTCGCACACGCC
GCTGCTGTGGCCGTTGCACCGCGCGCACCACAGCGCTTCCTACATGAGCGTGCGTATTACGTACCGCAACAACTTCTTCT
ACTACCTGATGATGCCGGGCCTGTGGATTGGCGGCGTGGCGGTGTACCTGGGCTTTGGGCCGGTCTATGCGGCGTACCTG
GTCGTCAAGCTGACTGTCATTGTTGGCGCGCATTGCGCCTGGCCCTGGGACGCACCGCTGTACCGCATCCGCGCGCTGCG
TCCGCTGATGTGGGTGATCGAGCGGACGATTTCCACGCCCGCCACGCACTGGGCGCATCACGCGCTCACCAACGCCGACG
GCATCGGCCACTACAAGGGCAATTTCGGCAACCTGCTGTTTTTCTGGGATGTCCTATTCGGCACGGCGCATATCACGCGC
AAATATCCCGCGCAGATCGGCTTGCAGGATGACGTGCTGTTCGGCGCAGAGCCTTGGACGGCGCAGATGTTCTATCCGCT
GGTGCAGTCAAGGCGCGAACAGTCGGCGTTGCGCCCGGGCGGCGCGGCCATCACCGAAATGGAAGTGGACCAGGCCGCGA
GCGCCAAGCAGGAAGCAGCCTGA

Upstream 100 bases:

>100_bases
ATGATGTTGCGTACTTTGCATTGAATGAATGTTAATTATGCATTGGACGCATTGGTATCGCCCTCCTAGGCTTGTCTCCA
CAACAAGCGAGGAGACACCA

Downstream 100 bases:

>100_bases
GTGGGCAGCGCCTAGGTATCGGCGTGCGTGACGGTATCGAGCACGCCGAGATAGCGCGTTTCGCCAATCTGGCCCTGGGC
GTCGAAGCGGCGCTCGGTCA

Product: fatty acid hydroxylase

Products: NA

Alternate protein names: Sterol Desaturase Family Protein; Sterol Desaturase; Sterol Desaturase-Like Protein

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSSHMEHALIVACILGFAAMEFVTRRYQANVRGRATANDAWLEVLMFISLVAVTQPIALLGSNALCNWLIPAQHNAWADL
PWWAMTGLLLIGDDLTQYLWHRASHTPLLWPLHRAHHSASYMSVRITYRNNFFYYLMMPGLWIGGVAVYLGFGPVYAAYL
VVKLTVIVGAHCAWPWDAPLYRIRALRPLMWVIERTISTPATHWAHHALTNADGIGHYKGNFGNLLFFWDVLFGTAHITR
KYPAQIGLQDDVLFGAEPWTAQMFYPLVQSRREQSALRPGGAAITEMEVDQAASAKQEAA

Sequences:

>Translated_300_residues
MSSHMEHALIVACILGFAAMEFVTRRYQANVRGRATANDAWLEVLMFISLVAVTQPIALLGSNALCNWLIPAQHNAWADL
PWWAMTGLLLIGDDLTQYLWHRASHTPLLWPLHRAHHSASYMSVRITYRNNFFYYLMMPGLWIGGVAVYLGFGPVYAAYL
VVKLTVIVGAHCAWPWDAPLYRIRALRPLMWVIERTISTPATHWAHHALTNADGIGHYKGNFGNLLFFWDVLFGTAHITR
KYPAQIGLQDDVLFGAEPWTAQMFYPLVQSRREQSALRPGGAAITEMEVDQAASAKQEAA
>Mature_299_residues
SSHMEHALIVACILGFAAMEFVTRRYQANVRGRATANDAWLEVLMFISLVAVTQPIALLGSNALCNWLIPAQHNAWADLP
WWAMTGLLLIGDDLTQYLWHRASHTPLLWPLHRAHHSASYMSVRITYRNNFFYYLMMPGLWIGGVAVYLGFGPVYAAYLV
VKLTVIVGAHCAWPWDAPLYRIRALRPLMWVIERTISTPATHWAHHALTNADGIGHYKGNFGNLLFFWDVLFGTAHITRK
YPAQIGLQDDVLFGAEPWTAQMFYPLVQSRREQSALRPGGAAITEMEVDQAASAKQEAA

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33776; Mature: 33645

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHMEHALIVACILGFAAMEFVTRRYQANVRGRATANDAWLEVLMFISLVAVTQPIALL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GSNALCNWLIPAQHNAWADLPWWAMTGLLLIGDDLTQYLWHRASHTPLLWPLHRAHHSAS
CCCCCEEEEECCCCCCCCCCCHHHHHHHHEECCHHHHHHHHHCCCCCEEEHHHHHHCCCC
YMSVRITYRNNFFYYLMMPGLWIGGVAVYLGFGPVYAAYLVVKLTVIVGAHCAWPWDAPL
EEEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
YRIRALRPLMWVIERTISTPATHWAHHALTNADGIGHYKGNFGNLLFFWDVLFGTAHITR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KYPAQIGLQDDVLFGAEPWTAQMFYPLVQSRREQSALRPGGAAITEMEVDQAASAKQEAA
HCCHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSHMEHALIVACILGFAAMEFVTRRYQANVRGRATANDAWLEVLMFISLVAVTQPIALL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GSNALCNWLIPAQHNAWADLPWWAMTGLLLIGDDLTQYLWHRASHTPLLWPLHRAHHSAS
CCCCCEEEEECCCCCCCCCCCHHHHHHHHEECCHHHHHHHHHCCCCCEEEHHHHHHCCCC
YMSVRITYRNNFFYYLMMPGLWIGGVAVYLGFGPVYAAYLVVKLTVIVGAHCAWPWDAPL
EEEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
YRIRALRPLMWVIERTISTPATHWAHHALTNADGIGHYKGNFGNLLFFWDVLFGTAHITR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KYPAQIGLQDDVLFGAEPWTAQMFYPLVQSRREQSALRPGGAAITEMEVDQAASAKQEAA
HCCHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA