| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yceG [C]
Identifier: 187928512
GI number: 187928512
Start: 1515115
End: 1516113
Strand: Reverse
Name: yceG [C]
Synonym: Rpic_1426
Alternate gene names: 187928512
Gene position: 1516113-1515115 (Counterclockwise)
Preceding gene: 187928516
Following gene: 187928511
Centisome position: 38.46
GC content: 64.46
Gene sequence:
>999_bases ATGCTCTCTTTTCTCAAACGCTTGGTCCTGCTGGCCATCCTGATTGTGCTGGCGGCGGCAGGCGGCGTGGTGTGGTGGGC CCAGCAACCGGTGAGCCTGGCGGCGTCGCCGCTGGAGGTGGTGATCAAACCGAACTCGAGCGTGATCTCGGTCGGCAAGC AGCTTGCGAGCGCCGGTGTGGGCGTGCAACCGCAGTTGTTCTCGCTGGTGGCGCGCGCGACAGGCAACGCCAAGAGCCTG AAAGCCGGCGGCTATGCGCTGGAAACCGGCGCGACGCCCATGTCCATCTTGGACAAGATGGCGCGCGGCGATGTCACGCA TTACGTGGTCACCGTCATCGAGGGCTGGTCGATGCGGCAGATGCGGGCGGTGGTGGACGCAGAGCCTGCGCTCAAGCACG ACACGGCCGGCATGTCCGATGCAGATCTGATGCGCAAGATTGGGGCGCCTGAAACCAATCCGGAAGGCCTGTTCTTTCCC GACACCTACCTCTTCGCACGGGGCAGCAGCGACGTGGAGCTGTACCGTCACGCGTACCAGGCCATGCAGAAGCGTCTGAA CGATGCCTGGGCCAAGCGCTCACTGGATCTGCCGTACAAGACGCCGTACGAAGCGCTGACCATGGCCTCCATCATCGAGA AGGAGACCGGCCAGAAGCTGGAACGGCCGATGATTGCCGCCGTGTTCGTCAACCGCCTGCGCAAGAACATGCTGCTGCAG ACCGACCCGACGGTCATCTACGGCATCGGTGCCGGCTTTGACGGCAATTTGCGCAAGCGCGACCTGCAGACCGACACGCC GTACAACACCTACACGCGCACCGGCCTGCCGCCCACGCCAATCGCGCTGCCGGGCATGGCGTCGCTGCAGGCGGCACTGA ACCCGGCACCGTCCGACGCGCTGTATTTCGTGGCGCGCGGCGACGGCAGCAGCCAGTTTTCGACCAACCTGACGGACCAC AACCGGGCCGTCAACAAATATCAGCGCGGCCAACCATGA
Upstream 100 bases:
>100_bases ATATTGGGCTGTCTGAAGGGCAGCTTGTGCCCTGTCTATCCATTTCAAGAGTGCGGCAATCGCCGGTGTCGGCCGGTTCC TCACACAGATTCGCAACAGA
Downstream 100 bases:
>100_bases CCGGCAAGTTCATCACATTCGAAGGGATCGACGGCGCGGGCAAGAGCACGCACCTGGCGTGGTTTGCACAGCAACTGCAG GCGAAGCTCGCGCCCCTGGG
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLSFLKRLVLLAILIVLAAAGGVVWWAQQPVSLAASPLEVVIKPNSSVISVGKQLASAGVGVQPQLFSLVARATGNAKSL KAGGYALETGATPMSILDKMARGDVTHYVVTVIEGWSMRQMRAVVDAEPALKHDTAGMSDADLMRKIGAPETNPEGLFFP DTYLFARGSSDVELYRHAYQAMQKRLNDAWAKRSLDLPYKTPYEALTMASIIEKETGQKLERPMIAAVFVNRLRKNMLLQ TDPTVIYGIGAGFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGMASLQAALNPAPSDALYFVARGDGSSQFSTNLTDH NRAVNKYQRGQP
Sequences:
>Translated_332_residues MLSFLKRLVLLAILIVLAAAGGVVWWAQQPVSLAASPLEVVIKPNSSVISVGKQLASAGVGVQPQLFSLVARATGNAKSL KAGGYALETGATPMSILDKMARGDVTHYVVTVIEGWSMRQMRAVVDAEPALKHDTAGMSDADLMRKIGAPETNPEGLFFP DTYLFARGSSDVELYRHAYQAMQKRLNDAWAKRSLDLPYKTPYEALTMASIIEKETGQKLERPMIAAVFVNRLRKNMLLQ TDPTVIYGIGAGFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGMASLQAALNPAPSDALYFVARGDGSSQFSTNLTDH NRAVNKYQRGQP >Mature_332_residues MLSFLKRLVLLAILIVLAAAGGVVWWAQQPVSLAASPLEVVIKPNSSVISVGKQLASAGVGVQPQLFSLVARATGNAKSL KAGGYALETGATPMSILDKMARGDVTHYVVTVIEGWSMRQMRAVVDAEPALKHDTAGMSDADLMRKIGAPETNPEGLFFP DTYLFARGSSDVELYRHAYQAMQKRLNDAWAKRSLDLPYKTPYEALTMASIIEKETGQKLERPMIAAVFVNRLRKNMLLQ TDPTVIYGIGAGFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGMASLQAALNPAPSDALYFVARGDGSSQFSTNLTDH NRAVNKYQRGQP
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=319, Percent_Identity=39.4984326018809, Blast_Score=210, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36040; Mature: 36040
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSFLKRLVLLAILIVLAAAGGVVWWAQQPVSLAASPLEVVIKPNSSVISVGKQLASAGV CHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCC GVQPQLFSLVARATGNAKSLKAGGYALETGATPMSILDKMARGDVTHYVVTVIEGWSMRQ CCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHH MRAVVDAEPALKHDTAGMSDADLMRKIGAPETNPEGLFFPDTYLFARGSSDVELYRHAYQ HHHHHCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCCEECCCCEEEECCCCHHHHHHHHHH AMQKRLNDAWAKRSLDLPYKTPYEALTMASIIEKETGQKLERPMIAAVFVNRLRKNMLLQ HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE TDPTVIYGIGAGFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGMASLQAALNPAPSDA CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCE LYFVARGDGSSQFSTNLTDHNRAVNKYQRGQP EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MLSFLKRLVLLAILIVLAAAGGVVWWAQQPVSLAASPLEVVIKPNSSVISVGKQLASAGV CHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCC GVQPQLFSLVARATGNAKSLKAGGYALETGATPMSILDKMARGDVTHYVVTVIEGWSMRQ CCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHH MRAVVDAEPALKHDTAGMSDADLMRKIGAPETNPEGLFFPDTYLFARGSSDVELYRHAYQ HHHHHCCCCCHHCCCCCCCHHHHHHHHCCCCCCCCCEECCCCEEEECCCCHHHHHHHHHH AMQKRLNDAWAKRSLDLPYKTPYEALTMASIIEKETGQKLERPMIAAVFVNRLRKNMLLQ HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE TDPTVIYGIGAGFDGNLRKRDLQTDTPYNTYTRTGLPPTPIALPGMASLQAALNPAPSDA CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCE LYFVARGDGSSQFSTNLTDHNRAVNKYQRGQP EEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]