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The map label for this gene is potF [C]

Identifier: 187928504

GI number: 187928504

Start: 1507556

End: 1508587

Strand: Reverse

Name: potF [C]

Synonym: Rpic_1418

Alternate gene names: 187928504

Gene position: 1508587-1507556 (Counterclockwise)

Preceding gene: 187928505

Following gene: 187928503

Centisome position: 38.26

GC content: 63.57

Gene sequence:

>1032_bases
ATGAAACGTCTCGTTCAATGGCTGCGCGCGTGCGGCCTCGTGGCTGCCGGCGCCATCGCCCTGGCTACGCCGGTGCAGGC
ACAGCCCGCGGGCCAGCAGGTCGCCATCTGCTACAACTGCCCGCCCGAATGGGCCGACTGGGCCAGCCAGATCAAGGCCA
TCAAGGAAAAGACCGGCATTACCGTGCCGTTCGACAACAAGAACTCCGGCCAAGCCATCGCGCAGATGCTGGCGGAGAAA
TCGCACCCTGTGGCCGACGTGGCATACCTCGGCATCACGTCTGCGTATCAGGCCAAGGAAAAGGGCCTGGTCGCCAACTA
CAAGCCCAAGCATTGGGAAGACATTCCGGCCGGCATGAAAGACCCGGACGGCGCGTTCTTCTCGATCCATTCCGGCACGC
TGGGCTTCTTCGTCAACAAGGACGCGCTGGAAGGCAAGCCGGTGCCGCGTTCCTGGAAAGACCTGCTCAAGCCCGAATAC
AAGGGCATGGTCGGCTACCTCGACCCGAGCAGCGCCTTCGTCGGCTATGTGGGCGCCGTGGCGGTCAACCAGGCGCTGGG
CGGCTCGCTTGACGACTTCGGCCCGGCCATCGAGTGGTTCAAGCAGTTGAAGAAGAACGCGCCGATCGTGCCGAAGCAGA
CAGCCTACGCGCGCGTCGTGGCCGGTGAAATCCCGATCCTGCTCGACTACGACTTCAACGCTTACCGCGCCAAGTACAAG
GATCACGCGAACGTGGAATTCGTGATCCCGCAGGAAGGCACGATTGCCGTGCCGTACGTGATGAGCCTGACAGCTGGCGC
GCCGCATGCCGAGAACGCCAAGAAGGTGCTCGATTTTGTCCTGTCGGACGAAGGCCAGACGCTGTGGGCCAACGCCTACC
TGCGCCCGGTGCGCGCCAGCGCCATGAGCAAGGAAGCCGCCTCGCGCTTCCTGCCGGCCAGCGAATACGCCCGTGCAAAG
ACGGTCGACTTCAACAAGATGGCAGCCGGCCAGCAGGCATTTGGCACGCGCTACCTGAACGAGGTCCGCTGA

Upstream 100 bases:

>100_bases
CGCACCGCCTGCTGGCGGGCGGCACGCTGGCCCGAGCGCCGGCTGAAACGTCTCTCTCCGTTGTTTCTTCCCTCACGTCT
GATACGCAAGGAGCGTCTCG

Downstream 100 bases:

>100_bases
GCATGAGCACCGTCACCCGAACCACCTTGCCCGACGATGCGGTGTTGCCCGCTCGGTGGCGGGTGGCGTTGCTGGCACCG
GCCGTTGCGCTGTTCTGCGC

Product: family 1 extracellular solute-binding protein

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKRLVQWLRACGLVAAGAIALATPVQAQPAGQQVAICYNCPPEWADWASQIKAIKEKTGITVPFDNKNSGQAIAQMLAEK
SHPVADVAYLGITSAYQAKEKGLVANYKPKHWEDIPAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEY
KGMVGYLDPSSAFVGYVGAVAVNQALGGSLDDFGPAIEWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
DHANVEFVIPQEGTIAVPYVMSLTAGAPHAENAKKVLDFVLSDEGQTLWANAYLRPVRASAMSKEAASRFLPASEYARAK
TVDFNKMAAGQQAFGTRYLNEVR

Sequences:

>Translated_343_residues
MKRLVQWLRACGLVAAGAIALATPVQAQPAGQQVAICYNCPPEWADWASQIKAIKEKTGITVPFDNKNSGQAIAQMLAEK
SHPVADVAYLGITSAYQAKEKGLVANYKPKHWEDIPAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEY
KGMVGYLDPSSAFVGYVGAVAVNQALGGSLDDFGPAIEWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
DHANVEFVIPQEGTIAVPYVMSLTAGAPHAENAKKVLDFVLSDEGQTLWANAYLRPVRASAMSKEAASRFLPASEYARAK
TVDFNKMAAGQQAFGTRYLNEVR
>Mature_343_residues
MKRLVQWLRACGLVAAGAIALATPVQAQPAGQQVAICYNCPPEWADWASQIKAIKEKTGITVPFDNKNSGQAIAQMLAEK
SHPVADVAYLGITSAYQAKEKGLVANYKPKHWEDIPAGMKDPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEY
KGMVGYLDPSSAFVGYVGAVAVNQALGGSLDDFGPAIEWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
DHANVEFVIPQEGTIAVPYVMSLTAGAPHAENAKKVLDFVLSDEGQTLWANAYLRPVRASAMSKEAASRFLPASEYARAK
TVDFNKMAAGQQAFGTRYLNEVR

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine. Polyamine Binding Protein. [C]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 37332; Mature: 37332

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLVQWLRACGLVAAGAIALATPVQAQPAGQQVAICYNCPPEWADWASQIKAIKEKTGI
CHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
TVPFDNKNSGQAIAQMLAEKSHPVADVAYLGITSAYQAKEKGLVANYKPKHWEDIPAGMK
EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSSAFVGYVGAV
CCCCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHCCHHHCCEEEEECCCHHHHHHHHHH
AVNQALGGSLDDFGPAIEWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCEEEECCCHHHHHHCC
DHANVEFVIPQEGTIAVPYVMSLTAGAPHAENAKKVLDFVLSDEGQTLWANAYLRPVRAS
CCCCEEEEECCCCCEECHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
AMSKEAASRFLPASEYARAKTVDFNKMAAGQQAFGTRYLNEVR
HHHHHHHHHCCCHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLVQWLRACGLVAAGAIALATPVQAQPAGQQVAICYNCPPEWADWASQIKAIKEKTGI
CHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
TVPFDNKNSGQAIAQMLAEKSHPVADVAYLGITSAYQAKEKGLVANYKPKHWEDIPAGMK
EEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DPDGAFFSIHSGTLGFFVNKDALEGKPVPRSWKDLLKPEYKGMVGYLDPSSAFVGYVGAV
CCCCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHCCHHHCCEEEEECCCHHHHHHHHHH
AVNQALGGSLDDFGPAIEWFKQLKKNAPIVPKQTAYARVVAGEIPILLDYDFNAYRAKYK
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCEEEECCCHHHHHHCC
DHANVEFVIPQEGTIAVPYVMSLTAGAPHAENAKKVLDFVLSDEGQTLWANAYLRPVRAS
CCCCEEEEECCCCCEECHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHH
AMSKEAASRFLPASEYARAKTVDFNKMAAGQQAFGTRYLNEVR
HHHHHHHHHCCCHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: Polyamine Binding Protein [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]