| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is icc [H]
Identifier: 187928500
GI number: 187928500
Start: 1503996
End: 1504850
Strand: Reverse
Name: icc [H]
Synonym: Rpic_1414
Alternate gene names: 187928500
Gene position: 1504850-1503996 (Counterclockwise)
Preceding gene: 187928501
Following gene: 187928498
Centisome position: 38.17
GC content: 65.03
Gene sequence:
>855_bases ATGCCGATGCACTTCCTGCAACTGACCGACCTTCATATCAAGCGCCCGGGGCGACTGGCTTATCGGCGCGTAGATTCGGC GGCCTATTTGTCACGCTGCGTGGCACATATCCTGGCACAGCCCGAGAAACCAGACGCTATCGTCCTGACCGGCGATCTGG TCGACGCCGGCGCGCCCGAGGAATACGCCCACCTGCGTGCGGTGCTGGCGCCGCTCGATGCGGCAGGCATCCGCATGCTG CCGGTGCTCGGCAACCACGATGGCCGTGATGCCGCACGCGAAGCCTTTGCCGATTGGCTCGCGCCAATTCCGGCCGCCGC GCAGGACACGCGTGCATTCCAGTACTGGACCGACATTGGCGATGTGCGCCTGATCGTGATCGACACGCTGGACACCGGCC ATCCGGGCGGCCGTCTGGGCTTACCGCGCCTTGATTGGGTGGCCGAAGCGCTGGCATGCGAAACGCAACGCCCGACCGTC ATCGCCATGCACCATCCGCCATTTGCCACCGGCATCGGCCACATGGACGTGCAATCGCTCGCCGAAGAAGATATCCCGGC CTTCGCGCAGATCGTGCGTGCCGCCGGCAACGTCGAGCGCATCATCTGCGGGCACCTGCATCGCTCCATCGACGTGCGTT TTGCGGGCACGGTGGCGTCCACTTGCCCATCGCCGGCACACCAGGTCGCACTGGATCTGGACCCTGATGCTGCGCCCGGT TTTGTCATGGAGCCACCGGCCTACAAGGTCCATGCGTGGGTGCCGGGGCAAGGCTTGGTGAGCCATCTCGCCTACGTGGG GCAATTTGATGGCCCGCATCCGTTTTTTGAGCCGGACGGCCGGCTGATCGACTAG
Upstream 100 bases:
>100_bases CGCCGTTGTTCATCGATGTGCCCGGCCGCCAGCAGTTTGCGCTGGGCCATGCGGTCGGCTTCGATATCCCGGCAGACCGC CTCTTGTCCTTGCAAGCCTG
Downstream 100 bases:
>100_bases GCCGCTTCCACGGCGGCCGCCAGACGGGCGACCAGCGCATCGGCCTCGCTTTCCGCCGATGCGATGGACGCGCGTAACCG CTTGTCGGCAAATTCGTCGT
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPMHFLQLTDLHIKRPGRLAYRRVDSAAYLSRCVAHILAQPEKPDAIVLTGDLVDAGAPEEYAHLRAVLAPLDAAGIRML PVLGNHDGRDAAREAFADWLAPIPAAAQDTRAFQYWTDIGDVRLIVIDTLDTGHPGGRLGLPRLDWVAEALACETQRPTV IAMHHPPFATGIGHMDVQSLAEEDIPAFAQIVRAAGNVERIICGHLHRSIDVRFAGTVASTCPSPAHQVALDLDPDAAPG FVMEPPAYKVHAWVPGQGLVSHLAYVGQFDGPHPFFEPDGRLID
Sequences:
>Translated_284_residues MPMHFLQLTDLHIKRPGRLAYRRVDSAAYLSRCVAHILAQPEKPDAIVLTGDLVDAGAPEEYAHLRAVLAPLDAAGIRML PVLGNHDGRDAAREAFADWLAPIPAAAQDTRAFQYWTDIGDVRLIVIDTLDTGHPGGRLGLPRLDWVAEALACETQRPTV IAMHHPPFATGIGHMDVQSLAEEDIPAFAQIVRAAGNVERIICGHLHRSIDVRFAGTVASTCPSPAHQVALDLDPDAAPG FVMEPPAYKVHAWVPGQGLVSHLAYVGQFDGPHPFFEPDGRLID >Mature_283_residues PMHFLQLTDLHIKRPGRLAYRRVDSAAYLSRCVAHILAQPEKPDAIVLTGDLVDAGAPEEYAHLRAVLAPLDAAGIRMLP VLGNHDGRDAAREAFADWLAPIPAAAQDTRAFQYWTDIGDVRLIVIDTLDTGHPGGRLGLPRLDWVAEALACETQRPTVI AMHHPPFATGIGHMDVQSLAEEDIPAFAQIVRAAGNVERIICGHLHRSIDVRFAGTVASTCPSPAHQVALDLDPDAAPGF VMEPPAYKVHAWVPGQGLVSHLAYVGQFDGPHPFFEPDGRLID
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli icc [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 30781; Mature: 30650
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMHFLQLTDLHIKRPGRLAYRRVDSAAYLSRCVAHILAQPEKPDAIVLTGDLVDAGAPE CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH EYAHLRAVLAPLDAAGIRMLPVLGNHDGRDAAREAFADWLAPIPAAAQDTRAFQYWTDIG HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCC DVRLIVIDTLDTGHPGGRLGLPRLDWVAEALACETQRPTVIAMHHPPFATGIGHMDVQSL CEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHH AEEDIPAFAQIVRAAGNVERIICGHLHRSIDVRFAGTVASTCPSPAHQVALDLDPDAAPG HHHCCHHHHHHHHHCCCHHHHHHHHHHCEEEEEECCCHHHCCCCCCCEEEEECCCCCCCC FVMEPPAYKVHAWVPGQGLVSHLAYVGQFDGPHPFFEPDGRLID CEECCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PMHFLQLTDLHIKRPGRLAYRRVDSAAYLSRCVAHILAQPEKPDAIVLTGDLVDAGAPE CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCH EYAHLRAVLAPLDAAGIRMLPVLGNHDGRDAAREAFADWLAPIPAAAQDTRAFQYWTDIG HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHEECCCC DVRLIVIDTLDTGHPGGRLGLPRLDWVAEALACETQRPTVIAMHHPPFATGIGHMDVQSL CEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHH AEEDIPAFAQIVRAAGNVERIICGHLHRSIDVRFAGTVASTCPSPAHQVALDLDPDAAPG HHHCCHHHHHHHHHCCCHHHHHHHHHHCEEEEEECCCHHHCCCCCCCEEEEECCCCCCCC FVMEPPAYKVHAWVPGQGLVSHLAYVGQFDGPHPFFEPDGRLID CEECCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]