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The map label for this gene is gcvA [C]

Identifier: 187928498

GI number: 187928498

Start: 1503005

End: 1503400

Strand: Reverse

Name: gcvA [C]

Synonym: Rpic_1412

Alternate gene names: 187928498

Gene position: 1503400-1503005 (Counterclockwise)

Preceding gene: 187928500

Following gene: 187928494

Centisome position: 38.13

GC content: 68.43

Gene sequence:

>396_bases
GTGCGGTCGCACGACGATCTGGCGCGCGTGCCGCTTATCCACTCCGAGTGGCAGCGGACACTGCCGCAGCCGATTGCCTG
GCCGATGTGGGCGCGCGCGGCAGGTATCGAGCACACGCTCAGGCACGACACGGGCATCGTGCTGTCCGACGACGGGCATG
CCATGTCGGCGGCAATGGCGGGGCAAGGCGTGATCCTGGCGAACCTGCCCCTGGTGCGCGATGCGCTGGAGGCGGGCACG
CTCGTCCAGCCTTTCGCAGCGCCGGTCATTCAGCGCTATGCGTTCTGGGCCGTGGCGCCATCTGCGCGGCTTGAAGACGC
TGCCGTGCGCGCGGTGTGGGATTGGCTATGCGCGTGCCGGGAAAACACGGCACGTGTGCATCGCTCAGCCCAATAG

Upstream 100 bases:

>100_bases
TTGCCGTGCGCTATGGCGATACGCCCGTCACGGGGAAGGACTCGTCACCGAGCGGCTCTTTGGCGACGCCTATGCGCCGG
TCTGCCACCCGGGCCTGAAC

Downstream 100 bases:

>100_bases
CGGCGACGCGGCACGTGCCGGCGCGAACGCTTCGTGCCACGCGGCCGCAAGCTGCAGCAACGCAAACTCCGACCGGGGCG
GCGCAATCACCTGCAGGCCC

Product: LysR substrate-binding

Products: NA

Alternate protein names: LysR Family Transcriptional Regulator; LysR Family Regulatory Helix-Turn-Helix Protein

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MRSHDDLARVPLIHSEWQRTLPQPIAWPMWARAAGIEHTLRHDTGIVLSDDGHAMSAAMAGQGVILANLPLVRDALEAGT
LVQPFAAPVIQRYAFWAVAPSARLEDAAVRAVWDWLCACRENTARVHRSAQ

Sequences:

>Translated_131_residues
MRSHDDLARVPLIHSEWQRTLPQPIAWPMWARAAGIEHTLRHDTGIVLSDDGHAMSAAMAGQGVILANLPLVRDALEAGT
LVQPFAAPVIQRYAFWAVAPSARLEDAAVRAVWDWLCACRENTARVHRSAQ
>Mature_131_residues
MRSHDDLARVPLIHSEWQRTLPQPIAWPMWARAAGIEHTLRHDTGIVLSDDGHAMSAAMAGQGVILANLPLVRDALEAGT
LVQPFAAPVIQRYAFWAVAPSARLEDAAVRAVWDWLCACRENTARVHRSAQ

Specific function: Regulatory Protein For The Glycine Cleavage System Operon (Gcv). Mediates Activation Of Gcv By Glycine And Repression By Purines. Gcva Is Negatively Autoregulated. Bind To Three Sites Upstream Of The Gcv Promoter. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14466; Mature: 14466

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSHDDLARVPLIHSEWQRTLPQPIAWPMWARAAGIEHTLRHDTGIVLSDDGHAMSAAMA
CCCCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHCCCCEEECCCCCCHHHHHC
GQGVILANLPLVRDALEAGTLVQPFAAPVIQRYAFWAVAPSARLEDAAVRAVWDWLCACR
CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ENTARVHRSAQ
HHHHHHHCCCC
>Mature Secondary Structure
MRSHDDLARVPLIHSEWQRTLPQPIAWPMWARAAGIEHTLRHDTGIVLSDDGHAMSAAMA
CCCCCCHHHCCCCHHHHHHHCCCCCCCHHHHHHHCCHHHHHCCCCEEECCCCCCHHHHHC
GQGVILANLPLVRDALEAGTLVQPFAAPVIQRYAFWAVAPSARLEDAAVRAVWDWLCACR
CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ENTARVHRSAQ
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA