| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is hipO [H]
Identifier: 187928496
GI number: 187928496
Start: 1500306
End: 1501520
Strand: Direct
Name: hipO [H]
Synonym: Rpic_1410
Alternate gene names: 187928496
Gene position: 1500306-1501520 (Clockwise)
Preceding gene: 187928495
Following gene: 187928497
Centisome position: 38.05
GC content: 64.53
Gene sequence:
>1215_bases ATGACGAAAGCCCCCACGCTCACGCCGTTCCAACTGTTGCCGCATCTCCTGCCGCCCGTCCATATCGATGCAGAAACGTT CGTCAACATCCGCCGTCAGATCCACGCGCAGCCCGAACTCGGTTTCGAGGTGGGCGCCACCAGCACGTTGGTGGCCGATC TGCTCAAGAGTTGGGGTTACGAGGTGCACACGGGCATCGGCAAGAGCGGCGTGGTGGGCCAACTGAAGCTGGGCAACGGC ACGCGCCGCCTTGGCATTCGCGCGGACATGGACGCCCTGCCCATTGTTGAAGCGACCGGCCTGCCTTACGCCAGCCGCAA CCACGGCAAGATGCATGCGTGCGGCCACGACGGGCACACCGCCATCCTGCTCGCCGCAGCCAAGGCGCTGGCCGAGAGCC GCGATTTTGATGGCACGCTGAACCTCATCTTCCAGCCCGATGAAGAAAACCTGTGCGGTGCGCGCGCCATGATCGAAGAC GGCCTCTTCGAGCGCTTCCCCTGCGATGCCGTCTATGCCTTGCACAACATGCCGGGCGTGCCGGCCGGCAGCTTCCGCGT GCTGCCGGGACCGGTGAGCCTGTCCTCCGACGTGGCCGACGTCACCATCAAGGGCATGGGCGGACACGGTGCGATGCCGC ATCGCGCGCGTGATCCGATTGCCGCGTCGGCCGCCATCATCACCGCGTTGCAAACCGTGGTCGCACGCAATGTCGCGCCT GACGACACGGCGGTGGTGTCGGTCGGTTTCATTCGCGGCGGTGCAACGCACAACGTGATTCCCGAATCGGTGACGATTGG CCTGAATGTGCGCGCAGCGCGGCCGGAAACGCGTGCGCTGGTGGAAATGCGCATTCGCGAGATTGTCAGCCTGACCGCAC AGGCGCATGGCGTCGAGGCGCAGATCGACTATCGTCAATTGACACCGCCCATGGTCAATACCGAGGCCGAGACGCAACTG GCGCAGCAGGTCTGTACTGAACTGGTGGGTGCGGCCAACGTCGTCACCCAGGCGCCCAAGGGGCTCAACGGCAGCGAAGA CTTTGCCTGGATGCTCAATGAAGTGCCGGGCTGCTACTTGATCCTGGGTAATGGCGAAGGCGAATTCGGCGGCTGCATGG TGCACAACCCCGGCTACGATTTCAACGACCAGGTGTTGCCGTTGGGCGCAGCCGCCTGGGTGCGTCTGGCGCAGGCCTAT CTGACCGCCGCGTGA
Upstream 100 bases:
>100_bases TGGCGTGCAGCGCCATCACGCTGCTGACCGTGCTGAGCCTGCGCGAAGCGCGCGAAACTGATTGACCCCGGATTCCCATC CCCAACCCCGGAGCCCCGAC
Downstream 100 bases:
>100_bases AGTGAACTTCGAGTCAAGCAATGCAAGCGAATCCGAGCCACGCTGCAACACCTGCGGCCGCCAACGAAGAGATCGTCCAA TGGAGCGCGATCGAACTGTC
Product: amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTKAPTLTPFQLLPHLLPPVHIDAETFVNIRRQIHAQPELGFEVGATSTLVADLLKSWGYEVHTGIGKSGVVGQLKLGNG TRRLGIRADMDALPIVEATGLPYASRNHGKMHACGHDGHTAILLAAAKALAESRDFDGTLNLIFQPDEENLCGARAMIED GLFERFPCDAVYALHNMPGVPAGSFRVLPGPVSLSSDVADVTIKGMGGHGAMPHRARDPIAASAAIITALQTVVARNVAP DDTAVVSVGFIRGGATHNVIPESVTIGLNVRAARPETRALVEMRIREIVSLTAQAHGVEAQIDYRQLTPPMVNTEAETQL AQQVCTELVGAANVVTQAPKGLNGSEDFAWMLNEVPGCYLILGNGEGEFGGCMVHNPGYDFNDQVLPLGAAAWVRLAQAY LTAA
Sequences:
>Translated_404_residues MTKAPTLTPFQLLPHLLPPVHIDAETFVNIRRQIHAQPELGFEVGATSTLVADLLKSWGYEVHTGIGKSGVVGQLKLGNG TRRLGIRADMDALPIVEATGLPYASRNHGKMHACGHDGHTAILLAAAKALAESRDFDGTLNLIFQPDEENLCGARAMIED GLFERFPCDAVYALHNMPGVPAGSFRVLPGPVSLSSDVADVTIKGMGGHGAMPHRARDPIAASAAIITALQTVVARNVAP DDTAVVSVGFIRGGATHNVIPESVTIGLNVRAARPETRALVEMRIREIVSLTAQAHGVEAQIDYRQLTPPMVNTEAETQL AQQVCTELVGAANVVTQAPKGLNGSEDFAWMLNEVPGCYLILGNGEGEFGGCMVHNPGYDFNDQVLPLGAAAWVRLAQAY LTAA >Mature_403_residues TKAPTLTPFQLLPHLLPPVHIDAETFVNIRRQIHAQPELGFEVGATSTLVADLLKSWGYEVHTGIGKSGVVGQLKLGNGT RRLGIRADMDALPIVEATGLPYASRNHGKMHACGHDGHTAILLAAAKALAESRDFDGTLNLIFQPDEENLCGARAMIEDG LFERFPCDAVYALHNMPGVPAGSFRVLPGPVSLSSDVADVTIKGMGGHGAMPHRARDPIAASAAIITALQTVVARNVAPD DTAVVSVGFIRGGATHNVIPESVTIGLNVRAARPETRALVEMRIREIVSLTAQAHGVEAQIDYRQLTPPMVNTEAETQLA QQVCTELVGAANVVTQAPKGLNGSEDFAWMLNEVPGCYLILGNGEGEFGGCMVHNPGYDFNDQVLPLGAAAWVRLAQAYL TAA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=421, Percent_Identity=27.5534441805226, Blast_Score=96, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 42847; Mature: 42715
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAPTLTPFQLLPHLLPPVHIDAETFVNIRRQIHAQPELGFEVGATSTLVADLLKSWGY CCCCCCCCHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCC EVHTGIGKSGVVGQLKLGNGTRRLGIRADMDALPIVEATGLPYASRNHGKMHACGHDGHT EEECCCCCCCCEEEEEECCCCEEECEEECCCCCCEEEECCCCCCCCCCCCEEECCCCCCH AILLAAAKALAESRDFDGTLNLIFQPDEENLCGARAMIEDGLFERFPCDAVYALHNMPGV HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHCCCHHHHHHHCCCCC PAGSFRVLPGPVSLSSDVADVTIKGMGGHGAMPHRARDPIAASAAIITALQTVVARNVAP CCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DDTAVVSVGFIRGGATHNVIPESVTIGLNVRAARPETRALVEMRIREIVSLTAQAHGVEA CCCEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEE QIDYRQLTPPMVNTEAETQLAQQVCTELVGAANVVTQAPKGLNGSEDFAWMLNEVPGCYL EECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEE ILGNGEGEFGGCMVHNPGYDFNDQVLPLGAAAWVRLAQAYLTAA EEECCCCCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHCC >Mature Secondary Structure TKAPTLTPFQLLPHLLPPVHIDAETFVNIRRQIHAQPELGFEVGATSTLVADLLKSWGY CCCCCCCHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHCCC EVHTGIGKSGVVGQLKLGNGTRRLGIRADMDALPIVEATGLPYASRNHGKMHACGHDGHT EEECCCCCCCCEEEEEECCCCEEECEEECCCCCCEEEECCCCCCCCCCCCEEECCCCCCH AILLAAAKALAESRDFDGTLNLIFQPDEENLCGARAMIEDGLFERFPCDAVYALHNMPGV HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCHHHCCCHHHHHHHCCCCC PAGSFRVLPGPVSLSSDVADVTIKGMGGHGAMPHRARDPIAASAAIITALQTVVARNVAP CCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC DDTAVVSVGFIRGGATHNVIPESVTIGLNVRAARPETRALVEMRIREIVSLTAQAHGVEA CCCEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEE QIDYRQLTPPMVNTEAETQLAQQVCTELVGAANVVTQAPKGLNGSEDFAWMLNEVPGCYL EECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEE ILGNGEGEFGGCMVHNPGYDFNDQVLPLGAAAWVRLAQAYLTAA EEECCCCCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]