| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187928491
Identifier: 187928491
GI number: 187928491
Start: 1494605
End: 1494967
Strand: Reverse
Name: 187928491
Synonym: Rpic_1405
Alternate gene names: NA
Gene position: 1494967-1494605 (Counterclockwise)
Preceding gene: 187928492
Following gene: 187928490
Centisome position: 37.92
GC content: 58.68
Gene sequence:
>363_bases ATGCAAAAGAACCGCGTTGTTGTGGACATTCACGCTATCACCGTCCGTGAGGGCACGTCGAAGAAGAATGGCCAGCCGTA CCACATGGAGGAGTGCGCATGCATGACGACAACGGAGTACGTGAACCCGGAAGGTGTGGTGGTCACGGAGACCATGCCGG GCATGGTGATGCTGCCGAAGCATCTGAACGGGAAGGTTCGTCCGGGGAAGTTCGAAGCGACGGTTGGCCTCGGTCAGTTC GAGGGGAAGCTCACGTTGCGCATCGTCGATTTGTCCCCTGTAGCCGTGCAGCAGAGCGGGACTGTGACTTCTGGTTCTGC GATTGGTGCGACTGCGACGAAGCCTGAGAAGGTTGCGGCGTAA
Upstream 100 bases:
>100_bases ACCCATGGTTTGACCGAACGGTCTTAGACCGGTTGGCGCGGTAAACCATACACCAATTTCCGGCATCCGAAGGGACCGGC TAACTGTCAAGGGGTAGGAC
Downstream 100 bases:
>100_bases CTGCCGCTGTAAGCCCGGGTGTCCGGGTTTTTTCAGTTTACGGAGTCGTGATGGGTCCCTTTTCTGAGTTCGATCCGGTG CGTGCTGCGGTGGGCATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MQKNRVVVDIHAITVREGTSKKNGQPYHMEECACMTTTEYVNPEGVVVTETMPGMVMLPKHLNGKVRPGKFEATVGLGQF EGKLTLRIVDLSPVAVQQSGTVTSGSAIGATATKPEKVAA
Sequences:
>Translated_120_residues MQKNRVVVDIHAITVREGTSKKNGQPYHMEECACMTTTEYVNPEGVVVTETMPGMVMLPKHLNGKVRPGKFEATVGLGQF EGKLTLRIVDLSPVAVQQSGTVTSGSAIGATATKPEKVAA >Mature_120_residues MQKNRVVVDIHAITVREGTSKKNGQPYHMEECACMTTTEYVNPEGVVVTETMPGMVMLPKHLNGKVRPGKFEATVGLGQF EGKLTLRIVDLSPVAVQQSGTVTSGSAIGATATKPEKVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12783; Mature: 12783
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKNRVVVDIHAITVREGTSKKNGQPYHMEECACMTTTEYVNPEGVVVTETMPGMVMLPK CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEECCCCEEEEECCCCEEEECC HLNGKVRPGKFEATVGLGQFEGKLTLRIVDLSPVAVQQSGTVTSGSAIGATATKPEKVAA CCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MQKNRVVVDIHAITVREGTSKKNGQPYHMEECACMTTTEYVNPEGVVVTETMPGMVMLPK CCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEECCCCEEEEECCCCEEEECC HLNGKVRPGKFEATVGLGQFEGKLTLRIVDLSPVAVQQSGTVTSGSAIGATATKPEKVAA CCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA