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The map label for this gene is xylY [H]

Identifier: 187928452

GI number: 187928452

Start: 1463623

End: 1464111

Strand: Direct

Name: xylY [H]

Synonym: Rpic_1365

Alternate gene names: 187928452

Gene position: 1463623-1464111 (Clockwise)

Preceding gene: 187928451

Following gene: 187928453

Centisome position: 37.12

GC content: 60.53

Gene sequence:

>489_bases
ATGAGCTCCAATTACCACAACATCTGCGCGGCTCTGTACCGTGAAGCGCGGCTGCTCGACGACCGCCAGTGGGACGCTTG
GCTGGAGTGCTACGCGGAGGACGTCACCTACTGGATGCCGGCATGGGATGACGATGACCAGCTGACCGACGACCCGCAAA
GCCAGATCTCGCTGATGTACTACGCCAATCGCTGCGGGCTGGAGGATCGCGTCTTCCGTATCAAGACCGAGCGCAGCGGC
GCGTCCACGCCGGAACCGCGAACCAGCCACACCGTCACCAACGTGGAAGTCCTGGCCGAACGCGGCGATGAAGTCGACGT
GCGCTACAACTTTCACACACTCAGCCACCGATACAAAACCACCGATCACTTCTTCGGCACGATGTTCGTCACCCTGCGCC
GCGCCGGCGAAGGTTTCCTGATCGCATCCAAGAAGATCGTCCTGAAGAACGACTACATCCGGCAGGTGCTCGACGTCTAT
CACGTCTGA

Upstream 100 bases:

>100_bases
GTGAACGCAGTGAAGACGAGGGGCTGTTCGTCTGCCAGCACGAATATTGGGTACAAGTCATGCGCGAGGCTCTGAAGAAA
GAAAGCGAAGGAGTGGCGGC

Downstream 100 bases:

>100_bases
CGAGCACACCCGTATCCAAGGCAGTGAGGTATTCCATGTCCAGTTTCACAGTCGCATTGAACTTCGAAGACGGCGTGACC
CGCTTCATCGATTGCAAAGC

Product: benzoate 1,2-dioxygenase small subunit

Products: 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate; NAD+

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSSNYHNICAALYREARLLDDRQWDAWLECYAEDVTYWMPAWDDDDQLTDDPQSQISLMYYANRCGLEDRVFRIKTERSG
ASTPEPRTSHTVTNVEVLAERGDEVDVRYNFHTLSHRYKTTDHFFGTMFVTLRRAGEGFLIASKKIVLKNDYIRQVLDVY
HV

Sequences:

>Translated_162_residues
MSSNYHNICAALYREARLLDDRQWDAWLECYAEDVTYWMPAWDDDDQLTDDPQSQISLMYYANRCGLEDRVFRIKTERSG
ASTPEPRTSHTVTNVEVLAERGDEVDVRYNFHTLSHRYKTTDHFFGTMFVTLRRAGEGFLIASKKIVLKNDYIRQVLDVY
HV
>Mature_161_residues
SSNYHNICAALYREARLLDDRQWDAWLECYAEDVTYWMPAWDDDDQLTDDPQSQISLMYYANRCGLEDRVFRIKTERSGA
STPEPRTSHTVTNVEVLAERGDEVDVRYNFHTLSHRYKTTDHFFGTMFVTLRRAGEGFLIASKKIVLKNDYIRQVLDVYH
V

Specific function: Unknown

COG id: COG5517

COG function: function code Q; Small subunit of phenylpropionate dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017641
- InterPro:   IPR000391 [H]

Pfam domain/function: PF00866 Ring_hydroxyl_B [H]

EC number: 1.14.12.10

Molecular weight: Translated: 19069; Mature: 18938

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNYHNICAALYREARLLDDRQWDAWLECYAEDVTYWMPAWDDDDQLTDDPQSQISLMY
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHEEEEE
YANRCGLEDRVFRIKTERSGASTPEPRTSHTVTNVEVLAERGDEVDVRYNFHTLSHRYKT
EECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCEEEEEEEEEECCCCCCC
TDHFFGTMFVTLRRAGEGFLIASKKIVLKNDYIRQVLDVYHV
CHHHHHHHHHHHHHCCCCEEEECCEEEECCHHHHHHHHHHCC
>Mature Secondary Structure 
SSNYHNICAALYREARLLDDRQWDAWLECYAEDVTYWMPAWDDDDQLTDDPQSQISLMY
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHEEEEE
YANRCGLEDRVFRIKTERSGASTPEPRTSHTVTNVEVLAERGDEVDVRYNFHTLSHRYKT
EECCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCEEEEEEEEEECCCCCCC
TDHFFGTMFVTLRRAGEGFLIASKKIVLKNDYIRQVLDVYHV
CHHHHHHHHHHHHHCCCCEEEECCEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: benzoate; NADH; H+; O2

Specific reaction: benzoate + NADH + H+ + O2 = 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate + NAD+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938949 [H]