Click here to switch to the map view.

The map label for this gene is 187928401

Identifier: 187928401

GI number: 187928401

Start: 1407058

End: 1408278

Strand: Reverse

Name: 187928401

Synonym: Rpic_1312

Alternate gene names: NA

Gene position: 1408278-1407058 (Counterclockwise)

Preceding gene: 187928405

Following gene: 187928400

Centisome position: 35.72

GC content: 68.06

Gene sequence:

>1221_bases
ATGGATTCATTGATCACGGCTGCAGCGCGCGCACTCGCTGCCGGTGACCCATTCGGAGCGCTGAACCGCGTCGCTCTGCG
CGACGATGCCGCCGCGCTGGCTCTGCGTGGCATCGCCATGGCCCAGCTCGGTGATCTGGCGCGCGCCAAGCTCCTGCTAC
GTCGCGCGGCCCGCGCATTCGGCTCTCGAGAGGCAGTGGCACGCGCTCGCTGCATCGTTGCGGAAGCCGAAATCGCCCTC
GCCTCGCGCGATCTTGGCTGGCCTGCCAAAACCCTCGACACGGCATGCGCCACGCTCGAGGCGCACGGCGACCACGTCAA
TGCCGCACACGCGCGGTATCTCAGCATCCGTCGCCTGCTGCTGATCGGCCGTCTGGACGACGCAGAAGCCGCGCTCGCCG
CGCTAACGCCGGCGCATCTTCCTCCGGTCTTGCGGGCGGCACATGCGCTTGTCGTCGCCGGCATTGCCATCCGACGTTTG
CAGACCGCTGCCGCACGGGCAGCCCTGAGCGATGCCGATCGCGCAGCACGCCAGGCCGGTATCCCGACGCTCAGCGCCGA
AGTCGAACGCGCTGCCCTGGTCTTGAGCGCACCTGCTGCGCGGCTCATCTCCCGCGGCGAAGAGCGCGTGTTGCGCCTTG
ATGATGTCGAGGCTCTCTTTGCATCGGACGCGCTGGTGGTGGATGCGTGCCGGCTTGCCGTGAGGCAGGCCGATACAGTC
GTCTCGCTCGCCACGCGGCCCGTTCTGTTTACGCTGGCACGTGCACTTGCAGAGGCGTGGCCGGAAGACGTGCCCAGAGA
CGGCCTCATCGCGGGGGCATTCCGCACCCGGCATCCCGACGAAACGCACCGCGTGCGCTTGCGCGTAGAGATCGGGCGTT
TGCGCACCGCGCTTGGTGCGCTGGGCACGGTCAAAGCGACGAAGCACGGATTTGCACTGCAACCCCACGCGACGCAAGAC
GTCGTTGTTCTCGCACAGCCTGTCGACGAGCAATACGCCGCCGTGCTGGCGTGCCTCGCTGATGGGGAATCGTGGTCCAG
CTCTGCATTGGCATTTGCGCTCGGGGCCAGCCAGCGCACCGTACAGCGCGCGCTCGACGCGTTGGCAGCCGCCGGCAAGG
TGCAGTTCTTCGGACGCGGGCGCGCGCGCCGATGGGTGACGCCGCCGGTACCCGGATTCGCGACCACCTTGTTACTCCCC
GCACCGCTGCCAAGTGACTAG

Upstream 100 bases:

>100_bases
TGTGTTGCACTCATGCTTGCCTCCGTTTTGGGTGAGTGGTCGTGTGCTAGATTAGGCGCCGACCTCAAACGGCGGGAGTG
ACAAGTGTGGCGGGATTCGA

Downstream 100 bases:

>100_bases
GATGAAGACTCCACAACCGATTCCAGCGAGCCCAACATGAAGCGATCCACCGCCGAAGTCGTGCGCGAATACGGCCCCTT
CCCTGGCGCAGAGAACGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MDSLITAAARALAAGDPFGALNRVALRDDAAALALRGIAMAQLGDLARAKLLLRRAARAFGSREAVARARCIVAEAEIAL
ASRDLGWPAKTLDTACATLEAHGDHVNAAHARYLSIRRLLLIGRLDDAEAALAALTPAHLPPVLRAAHALVVAGIAIRRL
QTAAARAALSDADRAARQAGIPTLSAEVERAALVLSAPAARLISRGEERVLRLDDVEALFASDALVVDACRLAVRQADTV
VSLATRPVLFTLARALAEAWPEDVPRDGLIAGAFRTRHPDETHRVRLRVEIGRLRTALGALGTVKATKHGFALQPHATQD
VVVLAQPVDEQYAAVLACLADGESWSSSALAFALGASQRTVQRALDALAAAGKVQFFGRGRARRWVTPPVPGFATTLLLP
APLPSD

Sequences:

>Translated_406_residues
MDSLITAAARALAAGDPFGALNRVALRDDAAALALRGIAMAQLGDLARAKLLLRRAARAFGSREAVARARCIVAEAEIAL
ASRDLGWPAKTLDTACATLEAHGDHVNAAHARYLSIRRLLLIGRLDDAEAALAALTPAHLPPVLRAAHALVVAGIAIRRL
QTAAARAALSDADRAARQAGIPTLSAEVERAALVLSAPAARLISRGEERVLRLDDVEALFASDALVVDACRLAVRQADTV
VSLATRPVLFTLARALAEAWPEDVPRDGLIAGAFRTRHPDETHRVRLRVEIGRLRTALGALGTVKATKHGFALQPHATQD
VVVLAQPVDEQYAAVLACLADGESWSSSALAFALGASQRTVQRALDALAAAGKVQFFGRGRARRWVTPPVPGFATTLLLP
APLPSD
>Mature_406_residues
MDSLITAAARALAAGDPFGALNRVALRDDAAALALRGIAMAQLGDLARAKLLLRRAARAFGSREAVARARCIVAEAEIAL
ASRDLGWPAKTLDTACATLEAHGDHVNAAHARYLSIRRLLLIGRLDDAEAALAALTPAHLPPVLRAAHALVVAGIAIRRL
QTAAARAALSDADRAARQAGIPTLSAEVERAALVLSAPAARLISRGEERVLRLDDVEALFASDALVVDACRLAVRQADTV
VSLATRPVLFTLARALAEAWPEDVPRDGLIAGAFRTRHPDETHRVRLRVEIGRLRTALGALGTVKATKHGFALQPHATQD
VVVLAQPVDEQYAAVLACLADGESWSSSALAFALGASQRTVQRALDALAAAGKVQFFGRGRARRWVTPPVPGFATTLLLP
APLPSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42757; Mature: 42757

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLITAAARALAAGDPFGALNRVALRDDAAALALRGIAMAQLGDLARAKLLLRRAARAF
CCHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSREAVARARCIVAEAEIALASRDLGWPAKTLDTACATLEAHGDHVNAAHARYLSIRRLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LIGRLDDAEAALAALTPAHLPPVLRAAHALVVAGIAIRRLQTAAARAALSDADRAARQAG
HHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IPTLSAEVERAALVLSAPAARLISRGEERVLRLDDVEALFASDALVVDACRLAVRQADTV
CCCHHHHHHHHHHHHHCCHHHHHHCCHHHEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VSLATRPVLFTLARALAEAWPEDVPRDGLIAGAFRTRHPDETHRVRLRVEIGRLRTALGA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHCCCCCCCCEEEEEEEHHHHHHHHHH
LGTVKATKHGFALQPHATQDVVVLAQPVDEQYAAVLACLADGESWSSSALAFALGASQRT
HHHHHHCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHEECCCCHHH
VQRALDALAAAGKVQFFGRGRARRWVTPPVPGFATTLLLPAPLPSD
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHEEECCCCCCC
>Mature Secondary Structure
MDSLITAAARALAAGDPFGALNRVALRDDAAALALRGIAMAQLGDLARAKLLLRRAARAF
CCHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSREAVARARCIVAEAEIALASRDLGWPAKTLDTACATLEAHGDHVNAAHARYLSIRRLL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LIGRLDDAEAALAALTPAHLPPVLRAAHALVVAGIAIRRLQTAAARAALSDADRAARQAG
HHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IPTLSAEVERAALVLSAPAARLISRGEERVLRLDDVEALFASDALVVDACRLAVRQADTV
CCCHHHHHHHHHHHHHCCHHHHHHCCHHHEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VSLATRPVLFTLARALAEAWPEDVPRDGLIAGAFRTRHPDETHRVRLRVEIGRLRTALGA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECHHHCCCCCCCCEEEEEEEHHHHHHHHHH
LGTVKATKHGFALQPHATQDVVVLAQPVDEQYAAVLACLADGESWSSSALAFALGASQRT
HHHHHHCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHEECCCCHHH
VQRALDALAAAGKVQFFGRGRARRWVTPPVPGFATTLLLPAPLPSD
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA