| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928385
Identifier: 187928385
GI number: 187928385
Start: 1392467
End: 1393363
Strand: Direct
Name: 187928385
Synonym: Rpic_1296
Alternate gene names: NA
Gene position: 1392467-1393363 (Clockwise)
Preceding gene: 187928384
Following gene: 187928387
Centisome position: 35.32
GC content: 62.21
Gene sequence:
>897_bases ATGACCGCGCCCGATTACTTCATCAAGGCCCGCCACGTCCGTTTCGACTGGAAGGACACGCCCATCCAGTGGATTCACGG CGATCCGTCCAGTACGCACATCATCAACATCCTGAATCTATTGTTTCCCGCCGGCGAGTTGTGGTTCTGCCGCGTTTACA ACAAGGCGTTGCCGCTGATTACCGACGCGAAGCTGCGCGCCGATGCCGAGGGCTTCCTGCGTCAGGAGGCGGTCCATTCG CGCTCGCATGGCGGCGTGCTGACGCATTACTACAAAGACCACGGCATCGATACTCAGCCTTTCACCAAGCGGCTCGACTG GCTGTTCTCCAAGGTGCTCGGCGAACAGCCGTTGGGTCTGAAGATCGGCCACACGCGCTTCTGGCTGCGGCAGCAACTCG GCATCATCGCCGCGCTCGAGCATTTTTTCGGCTACCTGGGCAACTGGGTGCTCAACGCAAAGGGGCTCGACGCCGCCCAC GCCGATCCCGTCATGCTGGACCTGTTGCGCTGGCATGGCGCGGAGGAAGTCGAGCACCGCACCGTCGCGTTCGACATCTT TCGGCACATGGGCGGCTCGTATCTCGAACGCTGCTTCCATATGCTGACCACGATCCTGTTGCTCCTGTACTTCTTGGTCA CCGGCTTTCGCTTCATGTACAAGCGCGATCCAGGGGCGGGCAGGTTCCCCGGTTTTATCCGCGGCTGGTGGCATGGCTCG CGGCGTAACTGCCTGCCATCGTTCTGGAAAATGCTGGGCGCCGCCCTGCGCTATTTCCGGCCCAGCTATACGCCGCATCA TGAAGGGTCGACCGAGCAGGCGCTGGCCTATCTGGAAACATCGCCGGCAGCGCAGGCCGCGGCGCACGGCGGCAACTGGG TGCGTGATCGCGCCTGA
Upstream 100 bases:
>100_bases GCTTCATCTCGCGCTATGCGCAATGGCTGAGCCGGCTGATCGCGCGCGTGAGCATGGCCGGGCATTGAGCCCGCACAGAC AAGAACATCCGGAGACCACC
Downstream 100 bases:
>100_bases CTGGCTCGCCCGCCGGCAGAAAAACAAAACGGCCGGTGCAATGCCGGCCGTTTTGTTTGCGGGGCGATTCCACGCTCAGT AGTTGTTGTGATCCATCTTG
Product: FF domain-containing protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; Conserved Protein UCP; Phthalate 4 5-Dioxygenase; FF Domain Protein; Metal-Dependent Hydrolase-Like; Metal Hydrolase
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MTAPDYFIKARHVRFDWKDTPIQWIHGDPSSTHIINILNLLFPAGELWFCRVYNKALPLITDAKLRADAEGFLRQEAVHS RSHGGVLTHYYKDHGIDTQPFTKRLDWLFSKVLGEQPLGLKIGHTRFWLRQQLGIIAALEHFFGYLGNWVLNAKGLDAAH ADPVMLDLLRWHGAEEVEHRTVAFDIFRHMGGSYLERCFHMLTTILLLLYFLVTGFRFMYKRDPGAGRFPGFIRGWWHGS RRNCLPSFWKMLGAALRYFRPSYTPHHEGSTEQALAYLETSPAAQAAAHGGNWVRDRA
Sequences:
>Translated_298_residues MTAPDYFIKARHVRFDWKDTPIQWIHGDPSSTHIINILNLLFPAGELWFCRVYNKALPLITDAKLRADAEGFLRQEAVHS RSHGGVLTHYYKDHGIDTQPFTKRLDWLFSKVLGEQPLGLKIGHTRFWLRQQLGIIAALEHFFGYLGNWVLNAKGLDAAH ADPVMLDLLRWHGAEEVEHRTVAFDIFRHMGGSYLERCFHMLTTILLLLYFLVTGFRFMYKRDPGAGRFPGFIRGWWHGS RRNCLPSFWKMLGAALRYFRPSYTPHHEGSTEQALAYLETSPAAQAAAHGGNWVRDRA >Mature_297_residues TAPDYFIKARHVRFDWKDTPIQWIHGDPSSTHIINILNLLFPAGELWFCRVYNKALPLITDAKLRADAEGFLRQEAVHSR SHGGVLTHYYKDHGIDTQPFTKRLDWLFSKVLGEQPLGLKIGHTRFWLRQQLGIIAALEHFFGYLGNWVLNAKGLDAAHA DPVMLDLLRWHGAEEVEHRTVAFDIFRHMGGSYLERCFHMLTTILLLLYFLVTGFRFMYKRDPGAGRFPGFIRGWWHGSR RNCLPSFWKMLGAALRYFRPSYTPHHEGSTEQALAYLETSPAAQAAAHGGNWVRDRA
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34344; Mature: 34213
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPDYFIKARHVRFDWKDTPIQWIHGDPSSTHIINILNLLFPAGELWFCRVYNKALPLI CCCCCHHHEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCE TDAKLRADAEGFLRQEAVHSRSHGGVLTHYYKDHGIDTQPFTKRLDWLFSKVLGEQPLGL ECCHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCCCCE KIGHTRFWLRQQLGIIAALEHFFGYLGNWVLNAKGLDAAHADPVMLDLLRWHGAEEVEHR EECHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHCCCHHHHHH TVAFDIFRHMGGSYLERCFHMLTTILLLLYFLVTGFRFMYKRDPGAGRFPGFIRGWWHGS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC RRNCLPSFWKMLGAALRYFRPSYTPHHEGSTEQALAYLETSPAAQAAAHGGNWVRDRA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure TAPDYFIKARHVRFDWKDTPIQWIHGDPSSTHIINILNLLFPAGELWFCRVYNKALPLI CCCCHHHEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCE TDAKLRADAEGFLRQEAVHSRSHGGVLTHYYKDHGIDTQPFTKRLDWLFSKVLGEQPLGL ECCHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCHHHHHHHHHHHHHHCCCCCCE KIGHTRFWLRQQLGIIAALEHFFGYLGNWVLNAKGLDAAHADPVMLDLLRWHGAEEVEHR EECHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHCCCHHHHHH TVAFDIFRHMGGSYLERCFHMLTTILLLLYFLVTGFRFMYKRDPGAGRFPGFIRGWWHGS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC RRNCLPSFWKMLGAALRYFRPSYTPHHEGSTEQALAYLETSPAAQAAAHGGNWVRDRA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA