| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is ppsA [H]
Identifier: 187928387
GI number: 187928387
Start: 1394521
End: 1396908
Strand: Direct
Name: ppsA [H]
Synonym: Rpic_1298
Alternate gene names: 187928387
Gene position: 1394521-1396908 (Clockwise)
Preceding gene: 187928385
Following gene: 187928388
Centisome position: 35.37
GC content: 63.65
Gene sequence:
>2388_bases ATGACTAACCTGTCGCAAGACGGCGCCTATGTGCTGCCGTTCGAGCAATTGCGGATGACCGATGTCGAGGTCGTCGGCGG TAAAAACGCTTCGCTGGGCGAGATGATCTCCCAGCTGGACGGCGCCGGCGTGCGCGTTCCGGGCGGTTTTGCCACCACGG CACTGGCGTTCCGCGATTTCCTTGCACACAACAACCTGACCGAGCGCATCTCGCAGCGTCTGGCCAGCCTCGACGTCGAC GACGTCAAGGCGCTGGCGGCCGCCGGCAAGGAGATCCGCGAATGGGTCGCCACCGCGCCGTTCCAGCCGCGTCTGGAGCA GGAGATTCGCGAGTCGTACGCTCGCGTGTCCGCCCGCGAAGGCGCTGAGGCATCGTTTGCGGTGCGCTCGTCGGCCACGG CGGAAGATCTGCCGGATGCTTCGTTCGCCGGCCAGCAAGAGAGCTATCTCAACGTCCTCGGCATCGACGACGTGCTCGAC AAGATCAAGCACGTGTTCGCCTCGCTGTACAACGACCGTGCGATTTCGTACCGCGTGCACAAGGGTTTCGCCCATGACGT GGTGGCCCTGTCTGCCGGCATCCAGCGTATGGTGCGCTCGGACTGCGGCGCCTCGGGCGTGATGTTCACCATCGACACCG AATCGGGCTTCCAGGATGTCGTTTTCATCACCTCCAGCTACGGCCTGGGCGAAACGGTGGTGCAGGGCGCTGTGAACCCG GACGAGTTCTACGTCTTCAAGCCTACGCTGGCCGCCGGCCAGTACCCCATCATCCGCCGCTCGATCGGTTCCAAGCTGAT CAAGATGGAGTTCACCGCGCCGGGCGAAGCAGGCCGCGTGAAGACCGTCGACGTGCCGGGCGAGCTTCGCAACCGCTACT CCATCAGCGATGCGGACGTGACGGAACTGGCCAAGTACGCCGTCATCATCGAGAAGCACTACGGCCGCCCGATGGATATC GAGTGGGGCCGCGACGGCCGCGACGGCAAGATCTACATCCTGCAGGCCCGCCCCGAAACGGTGAAGAGCCAGGCACACGG CAAGGTCGAGCAGCGTTTCCGCCTCAAGGGCTCAGCGCCGGTGCTGACCACCGGCCGCGCCATCGGCCAGAAGATCGGCA CGGGCCCGGTGCGTGTGATCAACGACCCGGCTGAAATGGAACGCGTGCAGCCCGGCGACGTGCTGGTGGCCGACATGACC GACCCGAACTGGGAGCCGGTGATGAAGCGCGCCTCAGCCATCGTCACCAACCGTGGCGGCCGTACCTGCCACGCGGCCAT CATCGCGCGTGAGCTGGGTGTGCCGGCAGTCGTGGGCTGCGGCGATGCGACCGACCTGCTGAAGGACGGCACGCTGGTGA CGGTCTCGTGCGCCGAAGGCGACGAAGGCAAGATCTACGACGGCCTGCTGGAAACCGAAATCACGGAAGTCCAGCGTGGC GAAATGCCGCCGATCAGCACCAAGATCATGATGAACGTCGGCAATCCGCAGCTGGCGTTCGACTTCTGCCAGATTCCGAA CGGTGGCGTGGGCTTGGCCCGCCTTGAGTTCATCATCAATAACAACATCGGCGTGCACCCGAAGGCGATTCTCGACTACC CGCAAGTCGACAGCGACCTGAAGAAGGCTGTGGAAAGCGTGGCCCGCGGCCATGCCAGCCCGCGTGCGTTCTATGTCGAC AAGCTGGCCGAGGGCATTGCCACCATCGCAGCGGCGTTCTATCCGAAACCCGTGATCGTGCGCCTGTCGGACTTCAAGTC CAACGAGTACAAGAAGCTGATTGGCGGTTCCCGCTACGAGCCGGACGAAGAAAACCCGATGCTGGGTTTCCGTGGCGCCT CGCGCTACATCGCCGAAGACTTTGCCGAAGCCTTCGAGATGGAGTGCCGTGCCATGAAGCGCGTGCGCGACGAGATGGGC CTGACCAACGTCGAAGTGATGGTGCCGTTCGTGCGTACGCTCGGCCAGGCTGAGAAGGTTGTCGAGCTGCTGGCCAAGTA CGGCCTGAAGCGCGGTGAGAACGGCCTGCGCCTGATCATGATGTGCGAAGTGCCGTCCAACGCGATCCTGGCCGAGCAAT TCCTGCAGCATTTCGACGGTTTCTCGATCGGTTCGAACGACCTGACGCAGCTCACGCTGGGTCTGGACCGCGACTCCGGC ATGGAGCTGCTCGCCCGCGACTTTGACGAGCGCGATCCGGCAGTCAAGTTCATGCTGCAGCGTGCCATTTCCACGGCGCT GTCGATGAACAAGTACGTCGGCATCTGCGGTCAAGGCCCGTCCGACCATCCGGATTTTGCCGAGTGGCTGGCCAAGGAAG GCATCTCGTCGATCTCGCTGAACCCGGACTCCGTGATCGACACGTGGCAGAAGCTGGGCTCGGCTTGA
Upstream 100 bases:
>100_bases GGGCTTCCGGATGATTTAGCCAAGCGATTCGTACGGCCAGACGACAAGAAGAAAGCCCCGTGCGGATCCGACCGGTTTTT CACTTAGTTTAGGGGCTTGT
Downstream 100 bases:
>100_bases TTCCGACCTAGAGTGCCGTAAGACAAGGCGCGTATTCTGAAGGGTACGCGCCAACAAGAACGCGAAGTGCCCGACGGCGT CCAACGCTGGCGGGGGCCGA
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 795; Mature: 794
Protein sequence:
>795_residues MTNLSQDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDGAGVRVPGGFATTALAFRDFLAHNNLTERISQRLASLDVD DVKALAAAGKEIREWVATAPFQPRLEQEIRESYARVSAREGAEASFAVRSSATAEDLPDASFAGQQESYLNVLGIDDVLD KIKHVFASLYNDRAISYRVHKGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNP DEFYVFKPTLAAGQYPIIRRSIGSKLIKMEFTAPGEAGRVKTVDVPGELRNRYSISDADVTELAKYAVIIEKHYGRPMDI EWGRDGRDGKIYILQARPETVKSQAHGKVEQRFRLKGSAPVLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMT DPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVQRG EMPPISTKIMMNVGNPQLAFDFCQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDLKKAVESVARGHASPRAFYVD KLAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVRDEMG LTNVEVMVPFVRTLGQAEKVVELLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLQHFDGFSIGSNDLTQLTLGLDRDSG MELLARDFDERDPAVKFMLQRAISTALSMNKYVGICGQGPSDHPDFAEWLAKEGISSISLNPDSVIDTWQKLGSA
Sequences:
>Translated_795_residues MTNLSQDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDGAGVRVPGGFATTALAFRDFLAHNNLTERISQRLASLDVD DVKALAAAGKEIREWVATAPFQPRLEQEIRESYARVSAREGAEASFAVRSSATAEDLPDASFAGQQESYLNVLGIDDVLD KIKHVFASLYNDRAISYRVHKGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNP DEFYVFKPTLAAGQYPIIRRSIGSKLIKMEFTAPGEAGRVKTVDVPGELRNRYSISDADVTELAKYAVIIEKHYGRPMDI EWGRDGRDGKIYILQARPETVKSQAHGKVEQRFRLKGSAPVLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMT DPNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVQRG EMPPISTKIMMNVGNPQLAFDFCQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDLKKAVESVARGHASPRAFYVD KLAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVRDEMG LTNVEVMVPFVRTLGQAEKVVELLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLQHFDGFSIGSNDLTQLTLGLDRDSG MELLARDFDERDPAVKFMLQRAISTALSMNKYVGICGQGPSDHPDFAEWLAKEGISSISLNPDSVIDTWQKLGSA >Mature_794_residues TNLSQDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDGAGVRVPGGFATTALAFRDFLAHNNLTERISQRLASLDVDD VKALAAAGKEIREWVATAPFQPRLEQEIRESYARVSAREGAEASFAVRSSATAEDLPDASFAGQQESYLNVLGIDDVLDK IKHVFASLYNDRAISYRVHKGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNPD EFYVFKPTLAAGQYPIIRRSIGSKLIKMEFTAPGEAGRVKTVDVPGELRNRYSISDADVTELAKYAVIIEKHYGRPMDIE WGRDGRDGKIYILQARPETVKSQAHGKVEQRFRLKGSAPVLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMTD PNWEPVMKRASAIVTNRGGRTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVQRGE MPPISTKIMMNVGNPQLAFDFCQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDLKKAVESVARGHASPRAFYVDK LAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYEPDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVRDEMGL TNVEVMVPFVRTLGQAEKVVELLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLQHFDGFSIGSNDLTQLTLGLDRDSGM ELLARDFDERDPAVKFMLQRAISTALSMNKYVGICGQGPSDHPDFAEWLAKEGISSISLNPDSVIDTWQKLGSA
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=792, Percent_Identity=64.2676767676768, Blast_Score=1047, Evalue=0.0, Organism=Escherichia coli, GI1788726, Length=193, Percent_Identity=33.6787564766839, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1788756, Length=409, Percent_Identity=24.4498777506112, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI48994992, Length=409, Percent_Identity=25.6723716381418, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1789193, Length=390, Percent_Identity=26.1538461538462, Blast_Score=80, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17564524, Length=336, Percent_Identity=28.2738095238095, Blast_Score=98, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 86787; Mature: 86656
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLSQDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDGAGVRVPGGFATTALAFRDF CCCCCCCCCEEECHHHHCCCCEEEECCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHH LAHNNLTERISQRLASLDVDDVKALAAAGKEIREWVATAPFQPRLEQEIRESYARVSARE HHCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC GAEASFAVRSSATAEDLPDASFAGQQESYLNVLGIDDVLDKIKHVFASLYNDRAISYRVH CCCCEEEECCCCCHHCCCCCCCCCCCHHHEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC KGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNP CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCC DEFYVFKPTLAAGQYPIIRRSIGSKLIKMEFTAPGEAGRVKTVDVPGELRNRYSISDADV CCEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCEEEEECCHHHHCCCCCCCCCH TELAKYAVIIEKHYGRPMDIEWGRDGRDGKIYILQARPETVKSQAHGKVEQRFRLKGSAP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHEECCCCC VLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMTDPNWEPVMKRASAIVTNRGG EEECCHHHHHHCCCCCEEEECCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC RTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVQRG CCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCC EMPPISTKIMMNVGNPQLAFDFCQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDL CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCHHH KKAVESVARGHASPRAFYVDKLAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCC PDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVRDEMGLTNVEVMVPFVRTLGQAEKV CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHH VELLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLQHFDGFSIGSNDLTQLTLGLDRDSG HHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC MELLARDFDERDPAVKFMLQRAISTALSMNKYVGICGQGPSDHPDFAEWLAKEGISSISL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCEECC NPDSVIDTWQKLGSA CCHHHHHHHHHHCCC >Mature Secondary Structure TNLSQDGAYVLPFEQLRMTDVEVVGGKNASLGEMISQLDGAGVRVPGGFATTALAFRDF CCCCCCCCEEECHHHHCCCCEEEECCCCCCHHHHHHHHCCCCEECCCCHHHHHHHHHHH LAHNNLTERISQRLASLDVDDVKALAAAGKEIREWVATAPFQPRLEQEIRESYARVSARE HHCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC GAEASFAVRSSATAEDLPDASFAGQQESYLNVLGIDDVLDKIKHVFASLYNDRAISYRVH CCCCEEEECCCCCHHCCCCCCCCCCCHHHEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC KGFAHDVVALSAGIQRMVRSDCGASGVMFTIDTESGFQDVVFITSSYGLGETVVQGAVNP CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCC DEFYVFKPTLAAGQYPIIRRSIGSKLIKMEFTAPGEAGRVKTVDVPGELRNRYSISDADV CCEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCEEEEECCHHHHCCCCCCCCCH TELAKYAVIIEKHYGRPMDIEWGRDGRDGKIYILQARPETVKSQAHGKVEQRFRLKGSAP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHEECCCCC VLTTGRAIGQKIGTGPVRVINDPAEMERVQPGDVLVADMTDPNWEPVMKRASAIVTNRGG EEECCHHHHHHCCCCCEEEECCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC RTCHAAIIARELGVPAVVGCGDATDLLKDGTLVTVSCAEGDEGKIYDGLLETEITEVQRG CCHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCC EMPPISTKIMMNVGNPQLAFDFCQIPNGGVGLARLEFIINNNIGVHPKAILDYPQVDSDL CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCHHH KKAVESVARGHASPRAFYVDKLAEGIATIAAAFYPKPVIVRLSDFKSNEYKKLIGGSRYE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCC PDEENPMLGFRGASRYIAEDFAEAFEMECRAMKRVRDEMGLTNVEVMVPFVRTLGQAEKV CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHH VELLAKYGLKRGENGLRLIMMCEVPSNAILAEQFLQHFDGFSIGSNDLTQLTLGLDRDSG HHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC MELLARDFDERDPAVKFMLQRAISTALSMNKYVGICGQGPSDHPDFAEWLAKEGISSISL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCCCEECC NPDSVIDTWQKLGSA CCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]