Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is ytfP [C]

Identifier: 187928319

GI number: 187928319

Start: 1318348

End: 1318770

Strand: Direct

Name: ytfP [C]

Synonym: Rpic_1230

Alternate gene names: 187928319

Gene position: 1318348-1318770 (Clockwise)

Preceding gene: 187928318

Following gene: 187928320

Centisome position: 33.44

GC content: 65.72

Gene sequence:

>423_bases
ATGACCCGCGCCAATGCCATCCACGTATTCGTCTACGGCACGCTGCGGGCCGGTGAGGCGAATGATTTGCGCGTTGCCGC
GGCCAAGCGTGGCATTCCCGAACCGGAGCTGCTCGGTACCGCCACGTTGCACGGCCGTCTGTACGACTTTGGTGCGTACC
CCGGCCTCGTGCTGGACCCGACCGGCACCGCCGTACGTGGCGATGTATATCGCATCGATGCGGCGCTCGTTCCCGTGCTG
GACGAGATCGAAGAGGTCTACCCCGGCGGCGATGCGCTGTTCCTGCGGGAGAACCACGCCGTCGTCATGCTGGGCAGCGA
ACCGGTCGACTGCATTGTCTATCCGGTCAGCCCGCAGCACATTGCGGGGCGCCCCGTCATCACGGGCGGAGATTGGGTGG
CGCATCGACTGTCTCGAGGCTGA

Upstream 100 bases:

>100_bases
AGCGCGAAGTCGGCGTGCAGATGCCGGGCGCTTACATCCAGTCTGGCGAGTGGATCTATGCCGATGAAGACGGCGTGCTG
GTTTCGCAGGACATGCTCGA

Downstream 100 bases:

>100_bases
TTCCGATTTTGAGGGGGAGGGGCGCGCGATATAATTCGCGCGCTGTTCATTCGAGCAGCCGGGTTTAGCAGCCCACCAGA
TGTGCCATCTAGACGGACAA

Product: AIG2 family protein

Products: NA

Alternate protein names: Butirosin Biosynthesis Protein BtrG; AIG2-Like Family

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDPTGTAVRGDVYRIDAALVPVL
DEIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQHIAGRPVITGGDWVAHRLSRG

Sequences:

>Translated_140_residues
MTRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDPTGTAVRGDVYRIDAALVPVL
DEIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQHIAGRPVITGGDWVAHRLSRG
>Mature_139_residues
TRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDPTGTAVRGDVYRIDAALVPVLD
EIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQHIAGRPVITGGDWVAHRLSRG

Specific function: Unknown

COG id: COG2105

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15014; Mature: 14883

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDP
CCCCCEEEEEEEEEEECCCCCCEEEEHHHCCCCCCHHEEEEEECCEEEECCCCCCEEECC
TGTAVRGDVYRIDAALVPVLDEIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQH
CCCEEECCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEEEEECCCCH
IAGRPVITGGDWVAHRLSRG
HCCCEEEECCHHHHHHHCCC
>Mature Secondary Structure 
TRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDP
CCCCEEEEEEEEEEECCCCCCEEEEHHHCCCCCCHHEEEEEECCEEEECCCCCCEEECC
TGTAVRGDVYRIDAALVPVLDEIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQH
CCCEEECCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEEEEECCCCH
IAGRPVITGGDWVAHRLSRG
HCCCEEEECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA