| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is ytfP [C]
Identifier: 187928319
GI number: 187928319
Start: 1318348
End: 1318770
Strand: Direct
Name: ytfP [C]
Synonym: Rpic_1230
Alternate gene names: 187928319
Gene position: 1318348-1318770 (Clockwise)
Preceding gene: 187928318
Following gene: 187928320
Centisome position: 33.44
GC content: 65.72
Gene sequence:
>423_bases ATGACCCGCGCCAATGCCATCCACGTATTCGTCTACGGCACGCTGCGGGCCGGTGAGGCGAATGATTTGCGCGTTGCCGC GGCCAAGCGTGGCATTCCCGAACCGGAGCTGCTCGGTACCGCCACGTTGCACGGCCGTCTGTACGACTTTGGTGCGTACC CCGGCCTCGTGCTGGACCCGACCGGCACCGCCGTACGTGGCGATGTATATCGCATCGATGCGGCGCTCGTTCCCGTGCTG GACGAGATCGAAGAGGTCTACCCCGGCGGCGATGCGCTGTTCCTGCGGGAGAACCACGCCGTCGTCATGCTGGGCAGCGA ACCGGTCGACTGCATTGTCTATCCGGTCAGCCCGCAGCACATTGCGGGGCGCCCCGTCATCACGGGCGGAGATTGGGTGG CGCATCGACTGTCTCGAGGCTGA
Upstream 100 bases:
>100_bases AGCGCGAAGTCGGCGTGCAGATGCCGGGCGCTTACATCCAGTCTGGCGAGTGGATCTATGCCGATGAAGACGGCGTGCTG GTTTCGCAGGACATGCTCGA
Downstream 100 bases:
>100_bases TTCCGATTTTGAGGGGGAGGGGCGCGCGATATAATTCGCGCGCTGTTCATTCGAGCAGCCGGGTTTAGCAGCCCACCAGA TGTGCCATCTAGACGGACAA
Product: AIG2 family protein
Products: NA
Alternate protein names: Butirosin Biosynthesis Protein BtrG; AIG2-Like Family
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDPTGTAVRGDVYRIDAALVPVL DEIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQHIAGRPVITGGDWVAHRLSRG
Sequences:
>Translated_140_residues MTRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDPTGTAVRGDVYRIDAALVPVL DEIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQHIAGRPVITGGDWVAHRLSRG >Mature_139_residues TRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDPTGTAVRGDVYRIDAALVPVLD EIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQHIAGRPVITGGDWVAHRLSRG
Specific function: Unknown
COG id: COG2105
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15014; Mature: 14883
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDP CCCCCEEEEEEEEEEECCCCCCEEEEHHHCCCCCCHHEEEEEECCEEEECCCCCCEEECC TGTAVRGDVYRIDAALVPVLDEIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQH CCCEEECCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEEEEECCCCH IAGRPVITGGDWVAHRLSRG HCCCEEEECCHHHHHHHCCC >Mature Secondary Structure TRANAIHVFVYGTLRAGEANDLRVAAAKRGIPEPELLGTATLHGRLYDFGAYPGLVLDP CCCCEEEEEEEEEEECCCCCCEEEEHHHCCCCCCHHEEEEEECCEEEECCCCCCEEECC TGTAVRGDVYRIDAALVPVLDEIEEVYPGGDALFLRENHAVVMLGSEPVDCIVYPVSPQH CCCEEECCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCEEEEEECCCCH IAGRPVITGGDWVAHRLSRG HCCCEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA