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The map label for this gene is ssuD

Identifier: 187928304

GI number: 187928304

Start: 1304597

End: 1305760

Strand: Direct

Name: ssuD

Synonym: Rpic_1215

Alternate gene names: 187928304

Gene position: 1304597-1305760 (Clockwise)

Preceding gene: 187928303

Following gene: 187928305

Centisome position: 33.09

GC content: 67.01

Gene sequence:

>1164_bases
ATGCAAGTTTTCTGGTTCATCCCGACGCACGGCGACAGCCGCTATCTCGGCACCGCCGAGGGCGCACGCCAAGTCGATCA
CACCTATCTGCAGCAGGTGGCCGTGGCCGCCGATACGCTCGGCTACGAGGGCGTGCTGATTCCCACCGGCCGCTCGTGCG
AAGACCCGTGGGTCGTGGCCGCGAGCCTGATTCCGGTCACGAAGCGCCTGCGTTTCCTGGTGGCGGTGCGCCCCGGGTTG
ATGGCGCCCACGCTGGCTGCCCGCATGGCCGCCACGTACGACCGTCTGTCGAATGGCCGCTTGCTGGTGAACCTTGTCAC
GGGTGGCGATCCTGCAGAGCTGGCCGGCGATGGCCTGTTCCTGGATCACGCGCAACGCTACGAGGCCTCGGAAGAGTTCA
TCCGCATCTGGCGTGAAACGCTGGCGGCAAGCCACGAAGGTGCAGCGCTGGACTACACCGGCAAGCACCTCAGCGTGAAG
GGCGCGAAGGTACTGTATCCGCCCGTGCAGCGGCCGCATCCGCCCGTGTATTTCGGTGGGTCGTCGGAAGCGGCGCACGA
GCTGGCTGCGGAACAGGTCGACTCGTATCTCACCTGGGGCGAACCGCCTGCCGCCGTGGCCGAAAAGATTGCCGACGTGC
GTGCGCGCGCTGCCAAGCATGGCCGCACCGTGCGCTTCGGTATCCGCCTGCACGTGATCGTGCGCGAGACGGAAGACGAA
GCCTGGGCGGCCGCCGACAAGCTCATCAGCAAGCTCGACGACGACACCGTGGCCCGTGCGCAAGAGGCTTTCCGCAAGAT
GGATTCGGCCGGCCAGCAACGCATGGCCGCGCTGCATGCCAACGGCGTCAAGCGCACGCGCGCCGATCTGGAGATCAGCC
CGAACCTGTGGGCCGGCGTGGGTCTGGTGCGCGGTGGTGCCGGCACGGCGCTCGTGGGCGATCCGCAAACCGTGGCCGCG
CGCATGAAGGAATACGCCGATCTGGGGATCGATACGTTCGTGCTGTCCGGCTATCCGCATCTGGAAGAGGCCTATCGGTT
TGCCGAACTGGTGTTCCCGCTGCTGCCGCGCTCGGTGCGCGACAAGCTGCCGGGCAACGTGCTGAACGGCCCGTTTGGCG
AAGTGATCGCCACCGGTATCGTGCCGCGCGTGGCGGCAAGCTGA

Upstream 100 bases:

>100_bases
CCGATCGAACTGGTCTGGCACCCGACCCCGGCGCAACTGGCCATTGCCCGCGCTTGAGTTGTTGCGTTGATCTGAGAACA
ACACAGTCCAAGGAGCTGTC

Downstream 100 bases:

>100_bases
GCCGAAAGGAGCAGGGCAATGGCATCCCAATCCAAACCGAAACCGAAGGCAAACACCTTCCTGCGTACCGCCCGGCAACG
ATTGGCGCCGTGGATCGTGC

Product: alkanesulfonate monooxygenase

Products: NA

Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MQVFWFIPTHGDSRYLGTAEGARQVDHTYLQQVAVAADTLGYEGVLIPTGRSCEDPWVVAASLIPVTKRLRFLVAVRPGL
MAPTLAARMAATYDRLSNGRLLVNLVTGGDPAELAGDGLFLDHAQRYEASEEFIRIWRETLAASHEGAALDYTGKHLSVK
GAKVLYPPVQRPHPPVYFGGSSEAAHELAAEQVDSYLTWGEPPAAVAEKIADVRARAAKHGRTVRFGIRLHVIVRETEDE
AWAAADKLISKLDDDTVARAQEAFRKMDSAGQQRMAALHANGVKRTRADLEISPNLWAGVGLVRGGAGTALVGDPQTVAA
RMKEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPRSVRDKLPGNVLNGPFGEVIATGIVPRVAAS

Sequences:

>Translated_387_residues
MQVFWFIPTHGDSRYLGTAEGARQVDHTYLQQVAVAADTLGYEGVLIPTGRSCEDPWVVAASLIPVTKRLRFLVAVRPGL
MAPTLAARMAATYDRLSNGRLLVNLVTGGDPAELAGDGLFLDHAQRYEASEEFIRIWRETLAASHEGAALDYTGKHLSVK
GAKVLYPPVQRPHPPVYFGGSSEAAHELAAEQVDSYLTWGEPPAAVAEKIADVRARAAKHGRTVRFGIRLHVIVRETEDE
AWAAADKLISKLDDDTVARAQEAFRKMDSAGQQRMAALHANGVKRTRADLEISPNLWAGVGLVRGGAGTALVGDPQTVAA
RMKEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPRSVRDKLPGNVLNGPFGEVIATGIVPRVAAS
>Mature_387_residues
MQVFWFIPTHGDSRYLGTAEGARQVDHTYLQQVAVAADTLGYEGVLIPTGRSCEDPWVVAASLIPVTKRLRFLVAVRPGL
MAPTLAARMAATYDRLSNGRLLVNLVTGGDPAELAGDGLFLDHAQRYEASEEFIRIWRETLAASHEGAALDYTGKHLSVK
GAKVLYPPVQRPHPPVYFGGSSEAAHELAAEQVDSYLTWGEPPAAVAEKIADVRARAAKHGRTVRFGIRLHVIVRETEDE
AWAAADKLISKLDDDTVARAQEAFRKMDSAGQQRMAALHANGVKRTRADLEISPNLWAGVGLVRGGAGTALVGDPQTVAA
RMKEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPRSVRDKLPGNVLNGPFGEVIATGIVPRVAAS

Specific function: Catalyzes the desulfonation of aliphatic sulfonates

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SsuD family

Homologues:

Organism=Escherichia coli, GI1787166, Length=387, Percent_Identity=67.4418604651163, Blast_Score=527, Evalue=1e-151,
Organism=Escherichia coli, GI1787247, Length=378, Percent_Identity=24.8677248677249, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSUD_RALPJ (B2UAU3)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001898791.1
- ProteinModelPortal:   B2UAU3
- GeneID:   6286169
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_1215
- HOGENOM:   HBG639644
- OMA:   REVRFGI
- ProtClustDB:   PRK00719
- HAMAP:   MF_01229
- InterPro:   IPR019911
- InterPro:   IPR011251
- InterPro:   IPR016048
- Gene3D:   G3DSA:3.20.20.30
- TIGRFAMs:   TIGR03565

Pfam domain/function: PF00296 Bac_luciferase; SSF51679 Luciferase_like

EC number: =1.14.14.5

Molecular weight: Translated: 41920; Mature: 41920

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFWFIPTHGDSRYLGTAEGARQVDHTYLQQVAVAADTLGYEGVLIPTGRSCEDPWVVA
CEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH
ASLIPVTKRLRFLVAVRPGLMAPTLAARMAATYDRLSNGRLLVNLVTGGDPAELAGDGLF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCEE
LDHAQRYEASEEFIRIWRETLAASHEGAALDYTGKHLSVKGAKVLYPPVQRPHPPVYFGG
EHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCEEECCCCCCCCCCEEECC
SSEAAHELAAEQVDSYLTWGEPPAAVAEKIADVRARAAKHGRTVRFGIRLHVIVRETEDE
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCH
AWAAADKLISKLDDDTVARAQEAFRKMDSAGQQRMAALHANGVKRTRADLEISPNLWAGV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCHHHCC
GLVRGGAGTALVGDPQTVAARMKEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPRSVR
CEEECCCCCEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHH
DKLPGNVLNGPFGEVIATGIVPRVAAS
HHCCCCCCCCCHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MQVFWFIPTHGDSRYLGTAEGARQVDHTYLQQVAVAADTLGYEGVLIPTGRSCEDPWVVA
CEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHH
ASLIPVTKRLRFLVAVRPGLMAPTLAARMAATYDRLSNGRLLVNLVTGGDPAELAGDGLF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCEE
LDHAQRYEASEEFIRIWRETLAASHEGAALDYTGKHLSVKGAKVLYPPVQRPHPPVYFGG
EHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCEEECCCCCCCCCCEEECC
SSEAAHELAAEQVDSYLTWGEPPAAVAEKIADVRARAAKHGRTVRFGIRLHVIVRETEDE
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCH
AWAAADKLISKLDDDTVARAQEAFRKMDSAGQQRMAALHANGVKRTRADLEISPNLWAGV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCHHHCC
GLVRGGAGTALVGDPQTVAARMKEYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPRSVR
CEEECCCCCEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHH
DKLPGNVLNGPFGEVIATGIVPRVAAS
HHCCCCCCCCCHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA