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The map label for this gene is ssuC [H]

Identifier: 187928305

GI number: 187928305

Start: 1305779

End: 1306591

Strand: Direct

Name: ssuC [H]

Synonym: Rpic_1216

Alternate gene names: 187928305

Gene position: 1305779-1306591 (Clockwise)

Preceding gene: 187928304

Following gene: 187928306

Centisome position: 33.12

GC content: 64.82

Gene sequence:

>813_bases
ATGGCATCCCAATCCAAACCGAAACCGAAGGCAAACACCTTCCTGCGTACCGCCCGGCAACGATTGGCGCCGTGGATCGT
GCCGCTTGTGCTGCTGGTGCTGTGGCAGGCCTCTGCCCAATGGGGCTGGCTGTCGAACCGCATCCTGCCGGCACCTCTGG
ACGTGGCGAAATCCGCCGTTGCGCTGGCGCGCTCTGGCGAGCTGTGGACCCACGTGGCCGTGAGCACCTGGCGCGCGCTG
CTGGGCTTTGTAATCGGCGGCTCGCTGGGTCTGGCGCTGGGGCTGCTGACCGGCACCTTCCGCACAGCCGAGACGCTGCT
CGACACCACGCTGCAGATGGTCCGCAACATCCCGGTGCTGGCGTTGATTCCGCTGGTGATCCTGTGGTTCGGCATCGATG
AATCGGCCAAGCTGTTCCTGGTATCGCTGGGCGTGTTCTTCCCGATTTATCTGAACACGTATCACGGCATCCGCTCTGTC
GACCCTGCCCTGGTGGAGATGGCCCGCAGCTACGGCCTGTCGCGTGCGCAGTTGTATCGGGAGGTGATCCTGCCCGGTGC
GCTGCCGCAGATCCTGGTGGGCGTGCGTTTCTCGCTCGGCCTGATGTGGGTGACGCTGATCGTGGCGGAGACGGTGTCTG
CGCAGGCCGGCATCGGCTACATGACGATGAATGCGCGCGAGTTCCTGCAGACCGATGTGGTGCTGCTGGGCATCCTGCTG
TATGCGCTGCTCGGCAAGCTGGCGGATTGGTTGTCGCGCGGGCTGGAACGTTACTGGCTGCGCTGGCACCCTGGGTATCA
AGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
CAAGCTGCCGGGCAACGTGCTGAACGGCCCGTTTGGCGAAGTGATCGCCACCGGTATCGTGCCGCGCGTGGCGGCAAGCT
GAGCCGAAAGGAGCAGGGCA

Downstream 100 bases:

>100_bases
GGCTGAATTGGAGAGACGCATGCAAAGCAATGCCACTGAACACGCCGCGCTGGCCGGCACCGCCCTGCACATCGAACACG
TCGTCAAACGCTACGGCGAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MASQSKPKPKANTFLRTARQRLAPWIVPLVLLVLWQASAQWGWLSNRILPAPLDVAKSAVALARSGELWTHVAVSTWRAL
LGFVIGGSLGLALGLLTGTFRTAETLLDTTLQMVRNIPVLALIPLVILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRSV
DPALVEMARSYGLSRAQLYREVILPGALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILL
YALLGKLADWLSRGLERYWLRWHPGYQAAA

Sequences:

>Translated_270_residues
MASQSKPKPKANTFLRTARQRLAPWIVPLVLLVLWQASAQWGWLSNRILPAPLDVAKSAVALARSGELWTHVAVSTWRAL
LGFVIGGSLGLALGLLTGTFRTAETLLDTTLQMVRNIPVLALIPLVILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRSV
DPALVEMARSYGLSRAQLYREVILPGALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILL
YALLGKLADWLSRGLERYWLRWHPGYQAAA
>Mature_269_residues
ASQSKPKPKANTFLRTARQRLAPWIVPLVLLVLWQASAQWGWLSNRILPAPLDVAKSAVALARSGELWTHVAVSTWRALL
GFVIGGSLGLALGLLTGTFRTAETLLDTTLQMVRNIPVLALIPLVILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRSVD
PALVEMARSYGLSRAQLYREVILPGALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILLY
ALLGKLADWLSRGLERYWLRWHPGYQAAA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=66.3967611336032, Blast_Score=306, Evalue=7e-85,
Organism=Escherichia coli, GI1786564, Length=243, Percent_Identity=37.8600823045267, Blast_Score=148, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29807; Mature: 29676

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQSKPKPKANTFLRTARQRLAPWIVPLVLLVLWQASAQWGWLSNRILPAPLDVAKSAV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
ALARSGELWTHVAVSTWRALLGFVIGGSLGLALGLLTGTFRTAETLLDTTLQMVRNIPVL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ALIPLVILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
EVILPGALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH
YALLGKLADWLSRGLERYWLRWHPGYQAAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ASQSKPKPKANTFLRTARQRLAPWIVPLVLLVLWQASAQWGWLSNRILPAPLDVAKSAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
ALARSGELWTHVAVSTWRALLGFVIGGSLGLALGLLTGTFRTAETLLDTTLQMVRNIPVL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ALIPLVILWFGIDESAKLFLVSLGVFFPIYLNTYHGIRSVDPALVEMARSYGLSRAQLYR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHH
EVILPGALPQILVGVRFSLGLMWVTLIVAETVSAQAGIGYMTMNAREFLQTDVVLLGILL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH
YALLGKLADWLSRGLERYWLRWHPGYQAAA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]