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The map label for this gene is yfbE [C]

Identifier: 187928286

GI number: 187928286

Start: 1284020

End: 1285180

Strand: Reverse

Name: yfbE [C]

Synonym: Rpic_1197

Alternate gene names: 187928286

Gene position: 1285180-1284020 (Counterclockwise)

Preceding gene: 187928287

Following gene: 187928285

Centisome position: 32.6

GC content: 63.65

Gene sequence:

>1161_bases
ATGACGCAAACCACCGCCACTGCCGAGCTGCCGTTCCTGCCCTTTGTACGCCCGACCATTGACGAGGCGACCATCGCCGC
CGTGGCCGATGTGCTGCGCTCGGGCTGGATCACCTCGGGCCCCAAGGTTGCCGCATTCGAAGCCGCGCTGTCGGAATACT
TCGGCGGCCGCATCGTGCGCACATTCGCCAATGGCACGGCCACGATGGAAGTCGCGCTGCGCATCGCGGGCATCGGCCCC
GGCGACGAGGTGATTACCACGCCGATCTCGTGGGTCGCCACGTCCAACGTGGTGCTGACGGTCGGTGCCAAGCCCGTCTT
CGTCGACATCGACCCCGTGACGCGCAACATCGACTTGGACAAGGTCGAGGCCGCCATCACGCCGCGTACCAAGGCGATCA
TTCCGGTGTATCTGTCTGGGCTGCCCGTGGATATGGATCGTCTGTACGACATCGCGCGCCGCCATAAGCTGCGCGTGGTG
GAAGACGCTGCACAGGCCATTGGTTCGCGCTGGGGCGACAAGCGCATCGGACAGATCGGCGACCTGGTCAGCTTCAGCTT
CCAGGCCAACAAGAACATCACCACCATCGAAGGCGGTGCGCTGGTGCTCAACACGCACGAAGAAGCCGTGCTGGCCGAAA
AATATCGCCTGCAAGGCGTCGTGCGCACCGGCTTTGACGGCATGGAAGTCGATCTGGTGGGCGGCAAGTTCAACCTGACG
GACGTGAATGCCGCCATCGGCCTGGGCCAGTTCGCTCAGTTGGAAGCCGTCACTGCACGCCGCGCAGCGCTAGCCCGCCG
CTACTTTGCCGGCATGCGCGCAGCCGACATCGAGTCGTTCGGCGTCGAGCTGCCGGTGGAGAACTTTACGAATACCAACT
GGCACATGTTCCAGATCGTGCTGCCGCTGGATCGCCTGAAGGTCGATCGCGCCGGGTTCATGGCTGGCCTGAAGACGCTG
GGCATCGGCGCGGGCGTGCACTATCCGCCGATCCACCTGTTCAAGCTCTATCGCGAACTCGGCTGGAAGCCGGGCATGTT
CCCGGTGGCCGAACGCATTGGCCGTGCCATCGTTACGCTGCCGATGTTTGCCGGCATGGAAGATTCCGATGTGGATCGCG
TGGTCAGCGCGGTCCGCCAACTTTGCGCCCAGTACCAATAA

Upstream 100 bases:

>100_bases
CAGCGCCTGATCGGCATCGCAATCATCCTCGTCGGCGTGCTTGTGCTGGCTCGCTCGTGAGCCGATCTGCGCGCGCCCAG
TACCCAACCCTATTCAAGTC

Downstream 100 bases:

>100_bases
TCCAATAATGAAGACACCCGCTCTCTCGGTCGTCATTCCTGTTTACAACGAAGAAGACGGGCTCGCCGCGCTGTTTGCGC
GCTTGTATCCCGCACTCGAT

Product: glutamine--scyllo-inositol transaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTQTTATAELPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRIVRTFANGTATMEVALRIAGIGP
GDEVITTPISWVATSNVVLTVGAKPVFVDIDPVTRNIDLDKVEAAITPRTKAIIPVYLSGLPVDMDRLYDIARRHKLRVV
EDAAQAIGSRWGDKRIGQIGDLVSFSFQANKNITTIEGGALVLNTHEEAVLAEKYRLQGVVRTGFDGMEVDLVGGKFNLT
DVNAAIGLGQFAQLEAVTARRAALARRYFAGMRAADIESFGVELPVENFTNTNWHMFQIVLPLDRLKVDRAGFMAGLKTL
GIGAGVHYPPIHLFKLYRELGWKPGMFPVAERIGRAIVTLPMFAGMEDSDVDRVVSAVRQLCAQYQ

Sequences:

>Translated_386_residues
MTQTTATAELPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRIVRTFANGTATMEVALRIAGIGP
GDEVITTPISWVATSNVVLTVGAKPVFVDIDPVTRNIDLDKVEAAITPRTKAIIPVYLSGLPVDMDRLYDIARRHKLRVV
EDAAQAIGSRWGDKRIGQIGDLVSFSFQANKNITTIEGGALVLNTHEEAVLAEKYRLQGVVRTGFDGMEVDLVGGKFNLT
DVNAAIGLGQFAQLEAVTARRAALARRYFAGMRAADIESFGVELPVENFTNTNWHMFQIVLPLDRLKVDRAGFMAGLKTL
GIGAGVHYPPIHLFKLYRELGWKPGMFPVAERIGRAIVTLPMFAGMEDSDVDRVVSAVRQLCAQYQ
>Mature_385_residues
TQTTATAELPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRIVRTFANGTATMEVALRIAGIGPG
DEVITTPISWVATSNVVLTVGAKPVFVDIDPVTRNIDLDKVEAAITPRTKAIIPVYLSGLPVDMDRLYDIARRHKLRVVE
DAAQAIGSRWGDKRIGQIGDLVSFSFQANKNITTIEGGALVLNTHEEAVLAEKYRLQGVVRTGFDGMEVDLVGGKFNLTD
VNAAIGLGQFAQLEAVTARRAALARRYFAGMRAADIESFGVELPVENFTNTNWHMFQIVLPLDRLKVDRAGFMAGLKTLG
IGAGVHYPPIHLFKLYRELGWKPGMFPVAERIGRAIVTLPMFAGMEDSDVDRVVSAVRQLCAQYQ

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=381, Percent_Identity=38.5826771653543, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI2367285, Length=374, Percent_Identity=31.283422459893, Blast_Score=158, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41976; Mature: 41845

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTTATAELPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRIVR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEE
TFANGTATMEVALRIAGIGPGDEVITTPISWVATSNVVLTVGAKPVFVDIDPVTRNIDLD
ECCCCCEEEEEEEEEECCCCCCCEEECCHHHEEECCEEEEECCCEEEEECCCCCCCCCHH
KVEAAITPRTKAIIPVYLSGLPVDMDRLYDIARRHKLRVVEDAAQAIGSRWGDKRIGQIG
HHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
DLVSFSFQANKNITTIEGGALVLNTHEEAVLAEKYRLQGVVRTGFDGMEVDLVGGKFNLT
HHHEEEEECCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEE
DVNAAIGLGQFAQLEAVTARRAALARRYFAGMRAADIESFGVELPVENFTNTNWHMFQIV
ECHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHCCCCCCEEEEEEE
LPLDRLKVDRAGFMAGLKTLGIGAGVHYPPIHLFKLYRELGWKPGMFPVAERIGRAIVTL
ECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCHHEEEH
PMFAGMEDSDVDRVVSAVRQLCAQYQ
HHHCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQTTATAELPFLPFVRPTIDEATIAAVADVLRSGWITSGPKVAAFEAALSEYFGGRIVR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEE
TFANGTATMEVALRIAGIGPGDEVITTPISWVATSNVVLTVGAKPVFVDIDPVTRNIDLD
ECCCCCEEEEEEEEEECCCCCCCEEECCHHHEEECCEEEEECCCEEEEECCCCCCCCCHH
KVEAAITPRTKAIIPVYLSGLPVDMDRLYDIARRHKLRVVEDAAQAIGSRWGDKRIGQIG
HHHHEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
DLVSFSFQANKNITTIEGGALVLNTHEEAVLAEKYRLQGVVRTGFDGMEVDLVGGKFNLT
HHHEEEEECCCCEEEEECCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEE
DVNAAIGLGQFAQLEAVTARRAALARRYFAGMRAADIESFGVELPVENFTNTNWHMFQIV
ECHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHCCCCCCEEEEEEE
LPLDRLKVDRAGFMAGLKTLGIGAGVHYPPIHLFKLYRELGWKPGMFPVAERIGRAIVTL
ECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCHHEEEH
PMFAGMEDSDVDRVVSAVRQLCAQYQ
HHHCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]