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The map label for this gene is arnC [H]

Identifier: 187928285

GI number: 187928285

Start: 1283017

End: 1284012

Strand: Reverse

Name: arnC [H]

Synonym: Rpic_1196

Alternate gene names: 187928285

Gene position: 1284012-1283017 (Counterclockwise)

Preceding gene: 187928286

Following gene: 187928284

Centisome position: 32.57

GC content: 62.25

Gene sequence:

>996_bases
ATGAAGACACCCGCTCTCTCGGTCGTCATTCCTGTTTACAACGAAGAAGACGGGCTCGCCGCGCTGTTTGCGCGCTTGTA
TCCCGCACTCGATGCACTCGGCATTTCGTACGAAGTCGTGTTCGTCAACGACGGCAGCCGCGACCGCTCCGCCGCCATGC
TGGCCGAACAGTTCCGCGCGCGCCCGGACAGCACGCGCGTCGTGCTGTTCAACGGCAACTATGGCCAGCACATGGCCATC
CTGGCCGGCTTCGAACATGCGCGCGGCGAACGCGTCGTCACGCTCGATGCCGACCTGCAGAACCCGCCGGAGGAAATCGG
CCGCCTGGTGGAAAAGCTCGACGAAGGCTACGACTACGTCGGTACCATCCGGCGCGTGCGCCAGGACAGCTGGTTCCGCC
GCACCGCGTCGCGTGCGATGAACTCGCTTCGCGAGCGCATCACGCACATCAAGATGACCGACCAGGGCTGCATGCTGCGC
GCCTACAACCGCACCATCGTCGACACCATCAACCGCTGCCGCGAAGTCAACACCTTCATCCCGGCGCTGGCCTACACCTT
CAGCAAGAACCCCACCGAAATCGAAGTCGACCACGAAGAGCGCTTCGCGGGCGAGTCGAAGTACTCGCTGTACAAGCTCG
TACGCTTGAATTTCGACCTGGTGACGGGCTTCTCGGTGGTACCGCTGCAATGGTTCTCGGCGATCGGGATGCTGCTGTCG
TTCGCCTCGGCGGTCCTGTTCATCCTGCTGGTGGTACGGCGGTTCGTCCTGGGCGCTGAAGTCCAGGGCGTGTTCACGCT
GTTCGCCATCACGTTCTTCCTGATGGGCGTACTGCTGTTTGGTATCGGCTTGCTGGGCGAATACATCGGCCGCATCTATC
AACAGGTGCGTGAGCGCCCGCGCTATCTGGTGCAGGGCGTGCTGGAGGAAACCTCACATTTGCATGAAGCAGGCGCTGCC
GATCTGAAGACGGGCTCGCAGCGAGGTGTTGCATGA

Upstream 100 bases:

>100_bases
ATCGTTACGCTGCCGATGTTTGCCGGCATGGAAGATTCCGATGTGGATCGCGTGGTCAGCGCGGTCCGCCAACTTTGCGC
CCAGTACCAATAATCCAATA

Downstream 100 bases:

>100_bases
GTTCCGACATCAAGCGGCGCGCCGTCGTTTTTGCGTATCACAACGTCGGGGTACGCTGCCTGCGCGTGCTGGCCGCCCGC
GGCATCCAGGTCGAACTCGT

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKTPALSVVIPVYNEEDGLAALFARLYPALDALGISYEVVFVNDGSRDRSAAMLAEQFRARPDSTRVVLFNGNYGQHMAI
LAGFEHARGERVVTLDADLQNPPEEIGRLVEKLDEGYDYVGTIRRVRQDSWFRRTASRAMNSLRERITHIKMTDQGCMLR
AYNRTIVDTINRCREVNTFIPALAYTFSKNPTEIEVDHEERFAGESKYSLYKLVRLNFDLVTGFSVVPLQWFSAIGMLLS
FASAVLFILLVVRRFVLGAEVQGVFTLFAITFFLMGVLLFGIGLLGEYIGRIYQQVRERPRYLVQGVLEETSHLHEAGAA
DLKTGSQRGVA

Sequences:

>Translated_331_residues
MKTPALSVVIPVYNEEDGLAALFARLYPALDALGISYEVVFVNDGSRDRSAAMLAEQFRARPDSTRVVLFNGNYGQHMAI
LAGFEHARGERVVTLDADLQNPPEEIGRLVEKLDEGYDYVGTIRRVRQDSWFRRTASRAMNSLRERITHIKMTDQGCMLR
AYNRTIVDTINRCREVNTFIPALAYTFSKNPTEIEVDHEERFAGESKYSLYKLVRLNFDLVTGFSVVPLQWFSAIGMLLS
FASAVLFILLVVRRFVLGAEVQGVFTLFAITFFLMGVLLFGIGLLGEYIGRIYQQVRERPRYLVQGVLEETSHLHEAGAA
DLKTGSQRGVA
>Mature_331_residues
MKTPALSVVIPVYNEEDGLAALFARLYPALDALGISYEVVFVNDGSRDRSAAMLAEQFRARPDSTRVVLFNGNYGQHMAI
LAGFEHARGERVVTLDADLQNPPEEIGRLVEKLDEGYDYVGTIRRVRQDSWFRRTASRAMNSLRERITHIKMTDQGCMLR
AYNRTIVDTINRCREVNTFIPALAYTFSKNPTEIEVDHEERFAGESKYSLYKLVRLNFDLVTGFSVVPLQWFSAIGMLLS
FASAVLFILLVVRRFVLGAEVQGVFTLFAITFFLMGVLLFGIGLLGEYIGRIYQQVRERPRYLVQGVLEETSHLHEAGAA
DLKTGSQRGVA

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=236, Percent_Identity=27.1186440677966, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1788588, Length=313, Percent_Identity=51.4376996805112, Blast_Score=322, Evalue=2e-89,
Organism=Escherichia coli, GI1788692, Length=304, Percent_Identity=30.5921052631579, Blast_Score=163, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6325441, Length=117, Percent_Identity=31.6239316239316, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585265, Length=175, Percent_Identity=28, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 37319; Mature: 37319

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPALSVVIPVYNEEDGLAALFARLYPALDALGISYEVVFVNDGSRDRSAAMLAEQFRA
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHC
RPDSTRVVLFNGNYGQHMAILAGFEHARGERVVTLDADLQNPPEEIGRLVEKLDEGYDYV
CCCCCEEEEEECCCCCHHHHHCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHH
GTIRRVRQDSWFRRTASRAMNSLRERITHIKMTDQGCMLRAYNRTIVDTINRCREVNTFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
PALAYTFSKNPTEIEVDHEERFAGESKYSLYKLVRLNFDLVTGFSVVPLQWFSAIGMLLS
HHHHHHHCCCCCEEEECHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FASAVLFILLVVRRFVLGAEVQGVFTLFAITFFLMGVLLFGIGLLGEYIGRIYQQVRERP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLVQGVLEETSHLHEAGAADLKTGSQRGVA
HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC
>Mature Secondary Structure
MKTPALSVVIPVYNEEDGLAALFARLYPALDALGISYEVVFVNDGSRDRSAAMLAEQFRA
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHC
RPDSTRVVLFNGNYGQHMAILAGFEHARGERVVTLDADLQNPPEEIGRLVEKLDEGYDYV
CCCCCEEEEEECCCCCHHHHHCCHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCHHH
GTIRRVRQDSWFRRTASRAMNSLRERITHIKMTDQGCMLRAYNRTIVDTINRCREVNTFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
PALAYTFSKNPTEIEVDHEERFAGESKYSLYKLVRLNFDLVTGFSVVPLQWFSAIGMLLS
HHHHHHHCCCCCEEEECHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FASAVLFILLVVRRFVLGAEVQGVFTLFAITFFLMGVLLFGIGLLGEYIGRIYQQVRERP
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RYLVQGVLEETSHLHEAGAADLKTGSQRGVA
HHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA