| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928250
Identifier: 187928250
GI number: 187928250
Start: 1245499
End: 1248138
Strand: Reverse
Name: 187928250
Synonym: Rpic_1160
Alternate gene names: NA
Gene position: 1248138-1245499 (Counterclockwise)
Preceding gene: 187928251
Following gene: 187928249
Centisome position: 31.66
GC content: 57.65
Gene sequence:
>2640_bases ATGAGTATTATTTCTTACGCCCAGAACTTTGAAGACGTCATGCTATGGCGTGCCTTGGGGCACGTAGCAGAAGGCTTCTA TATCGATGTGGGCGCCCAGCACCCCACTATCGATTCCGTCAGTAAAGCGTTTTACGAGCATGGCTGGCGCGGCATTCATG TGGAACCCACCAGCACCTATGCCACCTTGCTGAGACAGGATCGCCCGGACGAAACCGTTCTGCAGGCCGCCCTGACCCAC ACCCATGGCACGCTGACGTTTTACGAAATCCCCGAAACCGGCCTGTCTACGGCGGATGCCACCATTGCCGAGCGCCACAA GCAGCAGGGCTTCCAAACCCGTGAAACCACAGTTCCCTGCCTCACCCTGGCCGATGTGTTTGAACATGCCGGCTCACGCG ACATCCACTGGCTCAAGATTGATGTCGAAGGATTCGAACGGCAGGTGCTGGAAGGCTGGGGGCAGTCACTAGCCCGGCCA TGGATAGTCATAGTGGAAAGTACGCTTCCGCTAACAACTATCGAATCCCACTCACATTGGGAACCGCTACTGCTTGGCCG CGACTACGAACACGCCTATTTCGACGGACTTAACCGCTACTACGTCTCTGCCGGCCACCCCGAACTGCGCGAAGCGTTCC GCGCAGGGCCGAATGTGTTCGATGGCTTTGCGCTTAACGGCACTGCCAGCGCCCCTTTTTGCCACCTGGTGCAGGAACAC CATCAAGCACAAGTTGACTGCGCGCAGGCGGAGCTGGCCCAGGCAAAACACACTGCCCAGCAAGAAATCACGCGCCTGAC CGACGCATTGGCTACGCAACAGGAGCTTCACACCAAACAAGAGCAGGCCCTGGGGGAACAGTTACGAGCAGCGAACGATG CCGTGCACCAGCTCGAGTCCACGCTGGTTGATCAGGGCCGCGCCAATGTCGAGAAAGAACAATCGCTGATGCGCGACCAT GCTAATCGGGTCGAATCTCTGCTCCAGCAACTCCAAGCCAGCGAGACGGAGCTTCGTCAGTTAATGCAGGAAGGGGCTGC GCGCGAAAGAGAGCTAACACGGCAGGCTGCCCAAATCCGTGAGGAAGTGGACGAGCTGCTGCGCACCTTGGTACAGCGGG AAAAAGAGTTCTCCCAAGAACTCATGCAAACCCGCCAACATGGCGAACAAGCCCTGGCCGACCAGTTTTCCGCGAGCCAA GCCGAGCTGCGACGGCTGGCCCAGGAGGGAATCGAACGGGAACAAGTACTGACCCAGCACAACCTCCAGGTTCGGCAGCA GATGGAAGCCCTACTGCGCTCAGTAGCGCAGCGGGAAAGCGACTTTGCCAGAGAACTGCTACAAACCCGGCGCGAGGTCG AGCAGATCACTGCCGAACAAGCCCGCGTCCACGCGGAGCTAGAGCGGACTCTGCGTCACGAAGGGGCCGAGCGCGAATAC GCGTTGACCGAGCAAATCGGCCAACTTCGACTGGAAGTTAAAGAACTGCTCCATTCGTTGGCGCAACGGGAAAGCGAATT TTCCCGAGAACTTCAGCAGGTTCACCGCGACGCCCAGCAAGCCGTCGGCGAACAAGCCCGAGTGCATGCCGAGCGCGACC AGGCATTGGTTCAACAACTTCTGACCGCATACGCAGAATTGCGTAGCGCCGAAGCGCGCGGCCGTGATCGAGAACGACAG CTTGACCAGGAAATTTCCAGCACGCAGGCAGAGCTTATCCAACTGACGCAGGCCCATGCGACACTCGAGGCGCAGCTCAG AGAGCAAATGGCGGCAGCACAACATACAACCTTGGCGCTTAAGGCATCGTTAGATGCGATTCACACCTCTTTCGCATGGC GTCTCACGGCACCAGTGCGCTGGATTGGCTCCCTGTTGTTCACCCCTTTGCCACTGCCGCGAACTCAGGCGGCGCCGATA TTTTCACCTCCAGAAGCTCAGCCTGCAGCACCAGCCCCAACATCTGCTCTCACCCAACAACACTCGAGTGAGACCCCAAT TTCTGCCTTAGCGATCACCCCCCCCATGAACCGTCTATCAACAGCACACACGCTGGATGAACTCTTGTCGTACCACGATC AGGACTTCGTCTTTTGTGCTTACATAACCTTACTTGGCCGGGAGCCCGACCCGGAAGGTTTGCGCTACTACCTAGCTCGC GTGCGTCAAGGGGTTGGCAAAATAGAGATTCTTTCACAGCTTCGCCTCTCTCCAGAGGGGAAAGCACGTGGCGCATCACC CCTTGCGGGCTTGGATGCAGTAGTGACGCCCTATCGCTACCTCAAGCTTCCCGTGATCGGCTCGTTGCTTGGTTTTTTGA TAGGAGTCCAAGGCCCTGGCGTCAATCACCAGAAATTGAACGCGATCGAAAATCAAATCTGTGTCCTCGGCGACGAAAAC CGGCACCGCTTTGTGCAACTCGAACAAGCAATGGCCAGCCTACACCACGTGGTCATGCAGCAAGTTCACTCAGTAGGTGC CGATCTAGGTGACGCATCGAATCCGAGCGAAGTCGCCGCAGCTACCGACGGCATCCGACCGCCTGAGTTCGAAAGTCTCA AGCAACTCTCGCCACGCGCGCGGGAAATCTATCTTCAGCTTAAGAAGTCTGCTGCCATTCATGCCAAGGGAGTCGCATGA
Upstream 100 bases:
>100_bases AATTTGGTCTACCAAGACAACTGGTTTGATGACAGTTCCGGCCGCGGCACCTCAGTGGACGTCGGACGTGACGGCATGAG TGCTGCCCGGATGTAATAGC
Downstream 100 bases:
>100_bases TGCGAATTGTGATTGACCTGCAAGCTTGCCAGACTGCCGGTAGCAGGAATCGTGGTATCGGCCGGTATTCAATGGCGCTC GCGCAAGCGATGGTGAAGAA
Product: methyltransferase FkbM family protein
Products: NA
Alternate protein names: FkbM Family Methyltransferase; Methyltransferase FkbM; Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase FkbM Family Protein; Methyltransferase FkbM Family Domain Protein; Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 879; Mature: 878
Protein sequence:
>879_residues MSIISYAQNFEDVMLWRALGHVAEGFYIDVGAQHPTIDSVSKAFYEHGWRGIHVEPTSTYATLLRQDRPDETVLQAALTH THGTLTFYEIPETGLSTADATIAERHKQQGFQTRETTVPCLTLADVFEHAGSRDIHWLKIDVEGFERQVLEGWGQSLARP WIVIVESTLPLTTIESHSHWEPLLLGRDYEHAYFDGLNRYYVSAGHPELREAFRAGPNVFDGFALNGTASAPFCHLVQEH HQAQVDCAQAELAQAKHTAQQEITRLTDALATQQELHTKQEQALGEQLRAANDAVHQLESTLVDQGRANVEKEQSLMRDH ANRVESLLQQLQASETELRQLMQEGAARERELTRQAAQIREEVDELLRTLVQREKEFSQELMQTRQHGEQALADQFSASQ AELRRLAQEGIEREQVLTQHNLQVRQQMEALLRSVAQRESDFARELLQTRREVEQITAEQARVHAELERTLRHEGAEREY ALTEQIGQLRLEVKELLHSLAQRESEFSRELQQVHRDAQQAVGEQARVHAERDQALVQQLLTAYAELRSAEARGRDRERQ LDQEISSTQAELIQLTQAHATLEAQLREQMAAAQHTTLALKASLDAIHTSFAWRLTAPVRWIGSLLFTPLPLPRTQAAPI FSPPEAQPAAPAPTSALTQQHSSETPISALAITPPMNRLSTAHTLDELLSYHDQDFVFCAYITLLGREPDPEGLRYYLAR VRQGVGKIEILSQLRLSPEGKARGASPLAGLDAVVTPYRYLKLPVIGSLLGFLIGVQGPGVNHQKLNAIENQICVLGDEN RHRFVQLEQAMASLHHVVMQQVHSVGADLGDASNPSEVAAATDGIRPPEFESLKQLSPRAREIYLQLKKSAAIHAKGVA
Sequences:
>Translated_879_residues MSIISYAQNFEDVMLWRALGHVAEGFYIDVGAQHPTIDSVSKAFYEHGWRGIHVEPTSTYATLLRQDRPDETVLQAALTH THGTLTFYEIPETGLSTADATIAERHKQQGFQTRETTVPCLTLADVFEHAGSRDIHWLKIDVEGFERQVLEGWGQSLARP WIVIVESTLPLTTIESHSHWEPLLLGRDYEHAYFDGLNRYYVSAGHPELREAFRAGPNVFDGFALNGTASAPFCHLVQEH HQAQVDCAQAELAQAKHTAQQEITRLTDALATQQELHTKQEQALGEQLRAANDAVHQLESTLVDQGRANVEKEQSLMRDH ANRVESLLQQLQASETELRQLMQEGAARERELTRQAAQIREEVDELLRTLVQREKEFSQELMQTRQHGEQALADQFSASQ AELRRLAQEGIEREQVLTQHNLQVRQQMEALLRSVAQRESDFARELLQTRREVEQITAEQARVHAELERTLRHEGAEREY ALTEQIGQLRLEVKELLHSLAQRESEFSRELQQVHRDAQQAVGEQARVHAERDQALVQQLLTAYAELRSAEARGRDRERQ LDQEISSTQAELIQLTQAHATLEAQLREQMAAAQHTTLALKASLDAIHTSFAWRLTAPVRWIGSLLFTPLPLPRTQAAPI FSPPEAQPAAPAPTSALTQQHSSETPISALAITPPMNRLSTAHTLDELLSYHDQDFVFCAYITLLGREPDPEGLRYYLAR VRQGVGKIEILSQLRLSPEGKARGASPLAGLDAVVTPYRYLKLPVIGSLLGFLIGVQGPGVNHQKLNAIENQICVLGDEN RHRFVQLEQAMASLHHVVMQQVHSVGADLGDASNPSEVAAATDGIRPPEFESLKQLSPRAREIYLQLKKSAAIHAKGVA >Mature_878_residues SIISYAQNFEDVMLWRALGHVAEGFYIDVGAQHPTIDSVSKAFYEHGWRGIHVEPTSTYATLLRQDRPDETVLQAALTHT HGTLTFYEIPETGLSTADATIAERHKQQGFQTRETTVPCLTLADVFEHAGSRDIHWLKIDVEGFERQVLEGWGQSLARPW IVIVESTLPLTTIESHSHWEPLLLGRDYEHAYFDGLNRYYVSAGHPELREAFRAGPNVFDGFALNGTASAPFCHLVQEHH QAQVDCAQAELAQAKHTAQQEITRLTDALATQQELHTKQEQALGEQLRAANDAVHQLESTLVDQGRANVEKEQSLMRDHA NRVESLLQQLQASETELRQLMQEGAARERELTRQAAQIREEVDELLRTLVQREKEFSQELMQTRQHGEQALADQFSASQA ELRRLAQEGIEREQVLTQHNLQVRQQMEALLRSVAQRESDFARELLQTRREVEQITAEQARVHAELERTLRHEGAEREYA LTEQIGQLRLEVKELLHSLAQRESEFSRELQQVHRDAQQAVGEQARVHAERDQALVQQLLTAYAELRSAEARGRDRERQL DQEISSTQAELIQLTQAHATLEAQLREQMAAAQHTTLALKASLDAIHTSFAWRLTAPVRWIGSLLFTPLPLPRTQAAPIF SPPEAQPAAPAPTSALTQQHSSETPISALAITPPMNRLSTAHTLDELLSYHDQDFVFCAYITLLGREPDPEGLRYYLARV RQGVGKIEILSQLRLSPEGKARGASPLAGLDAVVTPYRYLKLPVIGSLLGFLIGVQGPGVNHQKLNAIENQICVLGDENR HRFVQLEQAMASLHHVVMQQVHSVGADLGDASNPSEVAAATDGIRPPEFESLKQLSPRAREIYLQLKKSAAIHAKGVA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 98590; Mature: 98459
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIISYAQNFEDVMLWRALGHVAEGFYIDVGAQHPTIDSVSKAFYEHGWRGIHVEPTSTY CCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHH ATLLRQDRPDETVLQAALTHTHGTLTFYEIPETGLSTADATIAERHKQQGFQTRETTVPC HHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHCCCCHH LTLADVFEHAGSRDIHWLKIDVEGFERQVLEGWGQSLARPWIVIVESTLPLTTIESHSHW HHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCC EPLLLGRDYEHAYFDGLNRYYVSAGHPELREAFRAGPNVFDGFALNGTASAPFCHLVQEH CCEEECCCCCHHHHCCCHHEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH HQAQVDCAQAELAQAKHTAQQEITRLTDALATQQELHTKQEQALGEQLRAANDAVHQLES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLVDQGRANVEKEQSLMRDHANRVESLLQQLQASETELRQLMQEGAARERELTRQAAQIR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEVDELLRTLVQREKEFSQELMQTRQHGEQALADQFSASQAELRRLAQEGIEREQVLTQH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH NLQVRQQMEALLRSVAQRESDFARELLQTRREVEQITAEQARVHAELERTLRHEGAEREY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ALTEQIGQLRLEVKELLHSLAQRESEFSRELQQVHRDAQQAVGEQARVHAERDQALVQQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAYAELRSAEARGRDRERQLDQEISSTQAELIQLTQAHATLEAQLREQMAAAQHTTLAL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KASLDAIHTSFAWRLTAPVRWIGSLLFTPLPLPRTQAAPIFSPPEAQPAAPAPTSALTQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC HSSETPISALAITPPMNRLSTAHTLDELLSYHDQDFVFCAYITLLGREPDPEGLRYYLAR CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH VRQGVGKIEILSQLRLSPEGKARGASPLAGLDAVVTPYRYLKLPVIGSLLGFLIGVQGPG HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCC VNHQKLNAIENQICVLGDENRHRFVQLEQAMASLHHVVMQQVHSVGADLGDASNPSEVAA CCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH ATDGIRPPEFESLKQLSPRAREIYLQLKKSAAIHAKGVA HHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SIISYAQNFEDVMLWRALGHVAEGFYIDVGAQHPTIDSVSKAFYEHGWRGIHVEPTSTY CHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHH ATLLRQDRPDETVLQAALTHTHGTLTFYEIPETGLSTADATIAERHKQQGFQTRETTVPC HHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHCCCCHH LTLADVFEHAGSRDIHWLKIDVEGFERQVLEGWGQSLARPWIVIVESTLPLTTIESHSHW HHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCC EPLLLGRDYEHAYFDGLNRYYVSAGHPELREAFRAGPNVFDGFALNGTASAPFCHLVQEH CCEEECCCCCHHHHCCCHHEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH HQAQVDCAQAELAQAKHTAQQEITRLTDALATQQELHTKQEQALGEQLRAANDAVHQLES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLVDQGRANVEKEQSLMRDHANRVESLLQQLQASETELRQLMQEGAARERELTRQAAQIR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEVDELLRTLVQREKEFSQELMQTRQHGEQALADQFSASQAELRRLAQEGIEREQVLTQH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH NLQVRQQMEALLRSVAQRESDFARELLQTRREVEQITAEQARVHAELERTLRHEGAEREY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH ALTEQIGQLRLEVKELLHSLAQRESEFSRELQQVHRDAQQAVGEQARVHAERDQALVQQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAYAELRSAEARGRDRERQLDQEISSTQAELIQLTQAHATLEAQLREQMAAAQHTTLAL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KASLDAIHTSFAWRLTAPVRWIGSLLFTPLPLPRTQAAPIFSPPEAQPAAPAPTSALTQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC HSSETPISALAITPPMNRLSTAHTLDELLSYHDQDFVFCAYITLLGREPDPEGLRYYLAR CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHH VRQGVGKIEILSQLRLSPEGKARGASPLAGLDAVVTPYRYLKLPVIGSLLGFLIGVQGPG HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCC VNHQKLNAIENQICVLGDENRHRFVQLEQAMASLHHVVMQQVHSVGADLGDASNPSEVAA CCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH ATDGIRPPEFESLKQLSPRAREIYLQLKKSAAIHAKGVA HHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA