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The map label for this gene is ctrC [H]

Identifier: 187928242

GI number: 187928242

Start: 1233245

End: 1234036

Strand: Direct

Name: ctrC [H]

Synonym: Rpic_1151

Alternate gene names: 187928242

Gene position: 1233245-1234036 (Clockwise)

Preceding gene: 187928241

Following gene: 187928243

Centisome position: 31.28

GC content: 54.8

Gene sequence:

>792_bases
ATGCGACATGACACGCCATTGCTGAGATCATTCCAGATCCAGTTGCGCGTGGTGGGGGCTTTGCTGATGCGCGAAATCCT
TACCCGCTACGGGCGGCACAACATCGGCTTCCTGTGGGTGTTTTTCGAGCCGATGATGTTCACCTTGGGGGTGACAGCGC
TATGGACGTTGAGCAAAGCCACCCATGGTTCCAGTTTGCCTATCACCGCGTTTGCTGTAACTGGATATTCCTCGGTACTG
GTCTGGCGAAACAGCGCAAGCCGTTGCGCGTTGGCGATTGAGCCTAATCAGAGCTTGCTGTATCACCGTAATGTCCGGGT
GATCGATCTGTTTTTGTCGCGCGTCATTCTGGAGATTGCCGGGGCGACCATTTCCTTTTTGTTTTTGACAACGCTGTTTG
TTACCTTGGGCATGATGGAGCCGCCGGCTGATATCACGCAGATCATTGGCGGCTGGATCTATCTGTCCGTCTTTGGCATT
GGGCTGGGTTTTATCGTCGGTGCGCTAAGCGAGCGGAGTGAAGCTGCTGAACGGATCTGGCATACCGTCGCCTATCTGCT
ATTTCCGCTTTCGGGGGCGCTGTTCATGGTCGACTGGATGCCAAGGGCCGTCCAAAAGTACATTTTGCTGCTTCCGATGG
TTCATGGCGTCGAGATGGTACGCGGGGGCTATTTCGGTGCGCTAGTCAAGCCCCATTACGACATCGGTTACATGGTCGTT
GCCGATCTGGTGATGCTGTTGGTCGGTCTGTTTTTCGTGATGGACGCCAGCAAGCGAGTGGAGCCGGAATGA

Upstream 100 bases:

>100_bases
TTTCGAAATTTTCGCCCTGGGCATGCTGGTGTGGGGGGTTCTCAGCTTAGTGCTTGCCGGCGTTCGCGAGCATCACGATT
AAGGTAGAGAAGAGACCTGC

Downstream 100 bases:

>100_bases
TCGAATTGGCGAATCTCTCCAAGATCTACCATACCCGTCAGGGTCGGCGCACTGTTCTGGACGGGATCAACCTGCGCGTC
GCCAAGGGAGAAAAGATTGG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MRHDTPLLRSFQIQLRVVGALLMREILTRYGRHNIGFLWVFFEPMMFTLGVTALWTLSKATHGSSLPITAFAVTGYSSVL
VWRNSASRCALAIEPNQSLLYHRNVRVIDLFLSRVILEIAGATISFLFLTTLFVTLGMMEPPADITQIIGGWIYLSVFGI
GLGFIVGALSERSEAAERIWHTVAYLLFPLSGALFMVDWMPRAVQKYILLLPMVHGVEMVRGGYFGALVKPHYDIGYMVV
ADLVMLLVGLFFVMDASKRVEPE

Sequences:

>Translated_263_residues
MRHDTPLLRSFQIQLRVVGALLMREILTRYGRHNIGFLWVFFEPMMFTLGVTALWTLSKATHGSSLPITAFAVTGYSSVL
VWRNSASRCALAIEPNQSLLYHRNVRVIDLFLSRVILEIAGATISFLFLTTLFVTLGMMEPPADITQIIGGWIYLSVFGI
GLGFIVGALSERSEAAERIWHTVAYLLFPLSGALFMVDWMPRAVQKYILLLPMVHGVEMVRGGYFGALVKPHYDIGYMVV
ADLVMLLVGLFFVMDASKRVEPE
>Mature_263_residues
MRHDTPLLRSFQIQLRVVGALLMREILTRYGRHNIGFLWVFFEPMMFTLGVTALWTLSKATHGSSLPITAFAVTGYSSVL
VWRNSASRCALAIEPNQSLLYHRNVRVIDLFLSRVILEIAGATISFLFLTTLFVTLGMMEPPADITQIIGGWIYLSVFGI
GLGFIVGALSERSEAAERIWHTVAYLLFPLSGALFMVDWMPRAVQKYILLLPMVHGVEMVRGGYFGALVKPHYDIGYMVV
ADLVMLLVGLFFVMDASKRVEPE

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrB and CtrD proteins [H]

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29508; Mature: 29508

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHDTPLLRSFQIQLRVVGALLMREILTRYGRHNIGFLWVFFEPMMFTLGVTALWTLSKA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
THGSSLPITAFAVTGYSSVLVWRNSASRCALAIEPNQSLLYHRNVRVIDLFLSRVILEIA
CCCCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHH
GATISFLFLTTLFVTLGMMEPPADITQIIGGWIYLSVFGIGLGFIVGALSERSEAAERIW
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTVAYLLFPLSGALFMVDWMPRAVQKYILLLPMVHGVEMVRGGYFGALVKPHYDIGYMVV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHH
ADLVMLLVGLFFVMDASKRVEPE
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRHDTPLLRSFQIQLRVVGALLMREILTRYGRHNIGFLWVFFEPMMFTLGVTALWTLSKA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHC
THGSSLPITAFAVTGYSSVLVWRNSASRCALAIEPNQSLLYHRNVRVIDLFLSRVILEIA
CCCCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHH
GATISFLFLTTLFVTLGMMEPPADITQIIGGWIYLSVFGIGLGFIVGALSERSEAAERIW
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTVAYLLFPLSGALFMVDWMPRAVQKYILLLPMVHGVEMVRGGYFGALVKPHYDIGYMVV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHH
ADLVMLLVGLFFVMDASKRVEPE
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307 [H]