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The map label for this gene is bexA [H]

Identifier: 187928243

GI number: 187928243

Start: 1234033

End: 1234686

Strand: Direct

Name: bexA [H]

Synonym: Rpic_1152

Alternate gene names: 187928243

Gene position: 1234033-1234686 (Clockwise)

Preceding gene: 187928242

Following gene: 187928244

Centisome position: 31.3

GC content: 56.73

Gene sequence:

>654_bases
ATGATCGAATTGGCGAATCTCTCCAAGATCTACCATACCCGTCAGGGTCGGCGCACTGTTCTGGACGGGATCAACCTGCG
CGTCGCCAAGGGAGAAAAGATTGGTGTTCTCGGCCGCAATGGCGCCGGGAAATCCACGATGATTCGCATGATCAGCGGTG
CGGAACTTCCCTCTGCAGGTAAGATTCGCCGCGGCATGAGTGTGTCCTGGCCCCTGGCATTTGGTGGCGCATTCCAAGGT
AGTCTGACCGGCATGGACAATCTGCGCTTCATCTGCCGGGTGTACGGCAGCGATGCCAAAGCGGCAGAACCGTTCGTGCA
AGAGTTCTCCGAATTGGGGTACTACCTGCGTGAGCCGGTAAAAACCTATTCGGCAGGCATGCGAGCCAGGCTGGCGTTCG
CCATTTCCATGGCCATTGAGTTCGACTGCTTTTTGATTGATGAAATCATCGCGGTGGGCGATAGCCGGTTCCATAGCAAA
TGCCACCGCGAACTATTCGAAAAGCGCCGCGACCGTTCGCTGATCATCGTCAGCCATGACGCCGGCTATATTCGCGAACA
CTGCGACAGCGCGGCCGTCCTGGTGCAGGGCAAGCTGCATACCTTCGAACAAGTCGACGACGCATATGCCTTCTACCAGG
AAAGCGTTGGCTAA

Upstream 100 bases:

>100_bases
AGCCCCATTACGACATCGGTTACATGGTCGTTGCCGATCTGGTGATGCTGTTGGTCGGTCTGTTTTTCGTGATGGACGCC
AGCAAGCGAGTGGAGCCGGA

Downstream 100 bases:

>100_bases
CTTGGTCGTGCCCTGCGCTTAAGGGGATGGCGTTGCGGCTAAGTTGGTTTTTTTCTTATCCTGCCCAGCAAGACAGGACT
TCATGATTCGCCGTCGCAGC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MIELANLSKIYHTRQGRRTVLDGINLRVAKGEKIGVLGRNGAGKSTMIRMISGAELPSAGKIRRGMSVSWPLAFGGAFQG
SLTGMDNLRFICRVYGSDAKAAEPFVQEFSELGYYLREPVKTYSAGMRARLAFAISMAIEFDCFLIDEIIAVGDSRFHSK
CHRELFEKRRDRSLIIVSHDAGYIREHCDSAAVLVQGKLHTFEQVDDAYAFYQESVG

Sequences:

>Translated_217_residues
MIELANLSKIYHTRQGRRTVLDGINLRVAKGEKIGVLGRNGAGKSTMIRMISGAELPSAGKIRRGMSVSWPLAFGGAFQG
SLTGMDNLRFICRVYGSDAKAAEPFVQEFSELGYYLREPVKTYSAGMRARLAFAISMAIEFDCFLIDEIIAVGDSRFHSK
CHRELFEKRRDRSLIIVSHDAGYIREHCDSAAVLVQGKLHTFEQVDDAYAFYQESVG
>Mature_217_residues
MIELANLSKIYHTRQGRRTVLDGINLRVAKGEKIGVLGRNGAGKSTMIRMISGAELPSAGKIRRGMSVSWPLAFGGAFQG
SLTGMDNLRFICRVYGSDAKAAEPFVQEFSELGYYLREPVKTYSAGMRARLAFAISMAIEFDCFLIDEIIAVGDSRFHSK
CHRELFEKRRDRSLIIVSHDAGYIREHCDSAAVLVQGKLHTFEQVDDAYAFYQESVG

Specific function: Putative ATP-binding protein, and an energy-coupling component of capsule polysaccharide export apparatus [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27477115, Length=209, Percent_Identity=30.622009569378, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI150417984, Length=211, Percent_Identity=29.8578199052133, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI47078218, Length=220, Percent_Identity=29.5454545454545, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI45446740, Length=220, Percent_Identity=29.5454545454545, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI27436953, Length=218, Percent_Identity=27.9816513761468, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI153792144, Length=209, Percent_Identity=29.1866028708134, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI6005701, Length=199, Percent_Identity=28.643216080402, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1787712, Length=228, Percent_Identity=29.3859649122807, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788761, Length=233, Percent_Identity=28.755364806867, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790467, Length=213, Percent_Identity=27.6995305164319, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789751, Length=191, Percent_Identity=27.7486910994764, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI2367384, Length=157, Percent_Identity=32.484076433121, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081782, Length=224, Percent_Identity=27.6785714285714, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787758, Length=194, Percent_Identity=25.7731958762887, Blast_Score=65, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6325030, Length=225, Percent_Identity=27.1111111111111, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI62484234, Length=196, Percent_Identity=30.1020408163265, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24167; Mature: 24167

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELANLSKIYHTRQGRRTVLDGINLRVAKGEKIGVLGRNGAGKSTMIRMISGAELPSAG
CCCCHHHHHHHHHCCCCHHHHCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCC
KIRRGMSVSWPLAFGGAFQGSLTGMDNLRFICRVYGSDAKAAEPFVQEFSELGYYLREPV
HHHCCCCEECCEEECCCCCCCCCCHHHHEEEEHEECCCCCCCCHHHHHHHHHHHHHHHHH
KTYSAGMRARLAFAISMAIEFDCFLIDEIIAVGDSRFHSKCHRELFEKRRDRSLIIVSHD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECC
AGYIREHCDSAAVLVQGKLHTFEQVDDAYAFYQESVG
CHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIELANLSKIYHTRQGRRTVLDGINLRVAKGEKIGVLGRNGAGKSTMIRMISGAELPSAG
CCCCHHHHHHHHHCCCCHHHHCCCEEEEECCCEEEEEECCCCCHHHHHHHHCCCCCCCCC
KIRRGMSVSWPLAFGGAFQGSLTGMDNLRFICRVYGSDAKAAEPFVQEFSELGYYLREPV
HHHCCCCEECCEEECCCCCCCCCCHHHHEEEEHEECCCCCCCCHHHHHHHHHHHHHHHHH
KTYSAGMRARLAFAISMAIEFDCFLIDEIIAVGDSRFHSKCHRELFEKRRDRSLIIVSHD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEECC
AGYIREHCDSAAVLVQGKLHTFEQVDDAYAFYQESVG
CHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3284653; 2082145 [H]