| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is rkpI [H]
Identifier: 187928238
GI number: 187928238
Start: 1228116
End: 1229693
Strand: Reverse
Name: rkpI [H]
Synonym: Rpic_1147
Alternate gene names: 187928238
Gene position: 1229693-1228116 (Counterclockwise)
Preceding gene: 187928239
Following gene: 187928237
Centisome position: 31.19
GC content: 64.13
Gene sequence:
>1578_bases ATGCCAGGCGCAGCCATTTTCCTGCTTGCCCTGGCGATGTCGTTCCTGCCGGACGCCATCGCCTTGCCGCGTTCCGCGCC GCCGTGGCGGCGCAACGCTGCGGCGCTTGCCACGCATGGTTTTTCGGTGGCAACGGTGTTCCTGCTGACGCTGGCGGTAT CGGCACGCCCGGTGTTCGCGGGTTTCGTGGCCGTGTCGCTGACGGGATTGCTGGCCGTGGTCAGCAACGCCAAGTATGCG TCGCTGCGCGAACCACTGGTGTTCTCGGACTTAAGCCTGTTCAGCCAGTTGTTCCGACATCCGCGCATGTACCTGCCGTT CCTCAGCTTTGCCAACGTGCTGGCGCTTGGCTTTGGTGTGGCGGTCTTCGTAGGGATGCTGGTGCTGAGCATGCCGCTGC AGGGCGCCTCGCGGGGGCTGCTGCTGGCCGGCGCGGCGGCTAGCTTCCTTTTGCACGCATGGGCCGTGCGAACGCTTCGG CTCACAATGCAGCCCGATGCCGACCAGCGCCAGCATGGCTTCTACGCGGTGTTCGTGGCCTACTTGCTGAACGGCCTGCG CCCCACCACTGCGGCAGCGCTGCGCACAGCGATGAGCCATGGGCCGTTCTCGCGCACGGCGGAACCAACGGTACGGCCGG ACGTCATCGTCATCCAGAGCGAATCGTTTTTCGACGCGCGCCGGCTCGGTCTCGCCGTGCGCGCCGATCTGCTGCCGAAC TTTGATGCAGCCTGCGCCGAAGCGGTGCAGTGCGGCCAACTGGAAGTGCCGGCCTGGGGCGCCAACACGATGCGCACGGA ATTTGCCGTGCTCTCGGGGCTGGATTCTGGCGCGCAAGGCTACGCCAAGTTCTACCCATATGCTTATATACGCCAGCCGT GTACTTCGTTGGCGGGGTGGTTCCGGCGCGCGGACTACCGTACGGTGGCTATGCATCCGTACCACGGAGACTTCTTCGGC AGGCACCGCGTTCTGCCGCTAATGCATTTCGATCGCTTTCTCGATATCCGCCATTTCAACAAGGCGCAGCGCGCGGGTCC CTACGTGGCCGACCTTGCGGTGGCCGATGCCATTCAGGTCGAACTTGAGGCCGCCGGCGATTCGCCGGCGTTCGTCTTCG CGATGACCATCGAGAACCATGGGCCGCTGCACCTGGAACACGTGGCGCCCGGGGAGGCGGCTTCCTATCATGCGTTTGGC GAAGGCAAGCCTTGGAACGATCTGACCGCCTACCTCCGCCACCTCGCAAATGCGGACGCCATGATCGGGCAGTTGACGCG CTATCTGGCTACCCGCAAGCGTCCCGCGATCCTCTGCTTCTATGGCGACCACGTGCCGGCACTCCCGGCGGTTTATCGCC AGACCGACCATCTACCCATCCATAGCGACTATCTGTTGTGGCGCAGTGATGCCGCCTCGGCGCCACCAAGCCAGCAGAAG CGCATGCGGGTACATGCCGAATCGTTGGGCCAACTGCTGATCGATTGCATCAGCGCCCCGCTACCGGCATCGCGGGATGC CGGGGCATCAAGAACAAACGCGGCGAGCACTGAAAGCCAACAGCAGCAACAACAGTAG
Upstream 100 bases:
>100_bases GGCGCTGGGTATGCGCCTGCTGCCACTGCTGCCTCCACGGCTGGGGGACCGCATCCTGGACCGGCTGTCCTACCTGCCCC GGGCAGAGCGTTAACGCAGC
Downstream 100 bases:
>100_bases TCTCTGCCACCTTGGTGTGCCCAGAGATAGCAACGTGAAGCCGCAAGCAGCGCAGAAATCGAGCAGGTTAAGAAGATGAA AGATGCAATAGCTATTGTCG
Product: sulfatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MPGAAIFLLALAMSFLPDAIALPRSAPPWRRNAAALATHGFSVATVFLLTLAVSARPVFAGFVAVSLTGLLAVVSNAKYA SLREPLVFSDLSLFSQLFRHPRMYLPFLSFANVLALGFGVAVFVGMLVLSMPLQGASRGLLLAGAAASFLLHAWAVRTLR LTMQPDADQRQHGFYAVFVAYLLNGLRPTTAAALRTAMSHGPFSRTAEPTVRPDVIVIQSESFFDARRLGLAVRADLLPN FDAACAEAVQCGQLEVPAWGANTMRTEFAVLSGLDSGAQGYAKFYPYAYIRQPCTSLAGWFRRADYRTVAMHPYHGDFFG RHRVLPLMHFDRFLDIRHFNKAQRAGPYVADLAVADAIQVELEAAGDSPAFVFAMTIENHGPLHLEHVAPGEAASYHAFG EGKPWNDLTAYLRHLANADAMIGQLTRYLATRKRPAILCFYGDHVPALPAVYRQTDHLPIHSDYLLWRSDAASAPPSQQK RMRVHAESLGQLLIDCISAPLPASRDAGASRTNAASTESQQQQQQ
Sequences:
>Translated_525_residues MPGAAIFLLALAMSFLPDAIALPRSAPPWRRNAAALATHGFSVATVFLLTLAVSARPVFAGFVAVSLTGLLAVVSNAKYA SLREPLVFSDLSLFSQLFRHPRMYLPFLSFANVLALGFGVAVFVGMLVLSMPLQGASRGLLLAGAAASFLLHAWAVRTLR LTMQPDADQRQHGFYAVFVAYLLNGLRPTTAAALRTAMSHGPFSRTAEPTVRPDVIVIQSESFFDARRLGLAVRADLLPN FDAACAEAVQCGQLEVPAWGANTMRTEFAVLSGLDSGAQGYAKFYPYAYIRQPCTSLAGWFRRADYRTVAMHPYHGDFFG RHRVLPLMHFDRFLDIRHFNKAQRAGPYVADLAVADAIQVELEAAGDSPAFVFAMTIENHGPLHLEHVAPGEAASYHAFG EGKPWNDLTAYLRHLANADAMIGQLTRYLATRKRPAILCFYGDHVPALPAVYRQTDHLPIHSDYLLWRSDAASAPPSQQK RMRVHAESLGQLLIDCISAPLPASRDAGASRTNAASTESQQQQQQ >Mature_524_residues PGAAIFLLALAMSFLPDAIALPRSAPPWRRNAAALATHGFSVATVFLLTLAVSARPVFAGFVAVSLTGLLAVVSNAKYAS LREPLVFSDLSLFSQLFRHPRMYLPFLSFANVLALGFGVAVFVGMLVLSMPLQGASRGLLLAGAAASFLLHAWAVRTLRL TMQPDADQRQHGFYAVFVAYLLNGLRPTTAAALRTAMSHGPFSRTAEPTVRPDVIVIQSESFFDARRLGLAVRADLLPNF DAACAEAVQCGQLEVPAWGANTMRTEFAVLSGLDSGAQGYAKFYPYAYIRQPCTSLAGWFRRADYRTVAMHPYHGDFFGR HRVLPLMHFDRFLDIRHFNKAQRAGPYVADLAVADAIQVELEAAGDSPAFVFAMTIENHGPLHLEHVAPGEAASYHAFGE GKPWNDLTAYLRHLANADAMIGQLTRYLATRKRPAILCFYGDHVPALPAVYRQTDHLPIHSDYLLWRSDAASAPPSQQKR MRVHAESLGQLLIDCISAPLPASRDAGASRTNAASTESQQQQQQ
Specific function: Involved in antigen K (capsular polysaccharide) biosynthesis [H]
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 57273; Mature: 57142
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGAAIFLLALAMSFLPDAIALPRSAPPWRRNAAALATHGFSVATVFLLTLAVSARPVFA CCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHH GFVAVSLTGLLAVVSNAKYASLREPLVFSDLSLFSQLFRHPRMYLPFLSFANVLALGFGV HHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AVFVGMLVLSMPLQGASRGLLLAGAAASFLLHAWAVRTLRLTMQPDADQRQHGFYAVFVA HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHEEEEECCCCCHHHCCHHHHHHH YLLNGLRPTTAAALRTAMSHGPFSRTAEPTVRPDVIVIQSESFFDARRLGLAVRADLLPN HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC FDAACAEAVQCGQLEVPAWGANTMRTEFAVLSGLDSGAQGYAKFYPYAYIRQPCTSLAGW CCHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHH FRRADYRTVAMHPYHGDFFGRHRVLPLMHFDRFLDIRHFNKAQRAGPYVADLAVADAIQV HHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEE ELEAAGDSPAFVFAMTIENHGPLHLEHVAPGEAASYHAFGEGKPWNDLTAYLRHLANADA EEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH MIGQLTRYLATRKRPAILCFYGDHVPALPAVYRQTDHLPIHSDYLLWRSDAASAPPSQQK HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHH RMRVHAESLGQLLIDCISAPLPASRDAGASRTNAASTESQQQQQQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure PGAAIFLLALAMSFLPDAIALPRSAPPWRRNAAALATHGFSVATVFLLTLAVSARPVFA CHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHH GFVAVSLTGLLAVVSNAKYASLREPLVFSDLSLFSQLFRHPRMYLPFLSFANVLALGFGV HHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AVFVGMLVLSMPLQGASRGLLLAGAAASFLLHAWAVRTLRLTMQPDADQRQHGFYAVFVA HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHEEEEECCCCCHHHCCHHHHHHH YLLNGLRPTTAAALRTAMSHGPFSRTAEPTVRPDVIVIQSESFFDARRLGLAVRADLLPN HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC FDAACAEAVQCGQLEVPAWGANTMRTEFAVLSGLDSGAQGYAKFYPYAYIRQPCTSLAGW CCHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHH FRRADYRTVAMHPYHGDFFGRHRVLPLMHFDRFLDIRHFNKAQRAGPYVADLAVADAIQV HHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEE ELEAAGDSPAFVFAMTIENHGPLHLEHVAPGEAASYHAFGEGKPWNDLTAYLRHLANADA EEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHH MIGQLTRYLATRKRPAILCFYGDHVPALPAVYRQTDHLPIHSDYLLWRSDAASAPPSQQK HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHH RMRVHAESLGQLLIDCISAPLPASRDAGASRTNAASTESQQQQQQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9079896; 11481430 [H]