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The map label for this gene is tal

Identifier: 187928168

GI number: 187928168

Start: 1143747

End: 1144706

Strand: Reverse

Name: tal

Synonym: Rpic_1075

Alternate gene names: 187928168

Gene position: 1144706-1143747 (Counterclockwise)

Preceding gene: 187928170

Following gene: 187928147

Centisome position: 29.03

GC content: 63.44

Gene sequence:

>960_bases
ATGACTCAGCTCGATCAACTCAAGCAGTTCACCACCGTCGTCGCCGACACGGGCGATTTCCAGGCCATGCGCGCCTACGC
GCCGCACGATGCAACGACCAATCCGTCGCTGATCCTCAAGGCTGTGCAGAAAGCCGAATACCGCCCGCTGCTCGAACAGG
CCGTGCGCGACGCTCGCAGCGACAGCGTGGAAGACATCATCGATGCCGTGCTCGTGGCATTCGGCTGCGAGATCCTGTCG
ATCATCCCGGGCCGAGTGTCCACCGAAGTCGATGCTCGCCTGTCGTTTGACACCGAGGCGACGGTCGCCAAGGCGAAGCA
TCTGATTGCGCTGTACGAAGCGCGCGGCGTGGCGCGCGAGCGCGTGCTGATCAAGATTGCGTCGACGTGGGAAGGCATCC
GCGCAGCAGATCAGCTTCGTGCCGAAGGCATCCGCTGCAACATGACGCTGCTGTTCTCGCTGGCCCAGGCCGTGGCGTGC
GCGGAAGCAGGCGTGCAGCTCATCTCGCCCTTCGTCGGCCGCATCTACGACTGGTACAAAAAGGATGCCGGCGCCAACTG
GGACCCGATCGCCCAAGGCGGCCCGAACGACCCCGGCGTGCAGTCCGTTCTGCGCATCTACAACTACTACAAGAAGTTCG
ACTACCCGACCGAAGTGATGGGCGCGAGCTTCCGCAATATCTCGCAGATCGTCGAACTGGCTGGCTGCGACCTCCTGACC
ATCAGCCCGGATCTGCTCGCCCAACTGCAGCAGTCCGACGCGCCGGTCGAGCGCAAGCTGTCTCCGGACAACGCCAACGC
GGCCAATATCGTGCGCCTGCCGGCTGACGAGAAATCGTTCCGCTGGCACATGAACGCGGACGCCATGGCCACCGAAAAGC
TGGCCGAAGGCATCCGCCTGTTTGCAGCGGACGCGATCAAGTTGGAAGCGTTGATTGAGCCGCTGCGCGCAGCGGCGTAA

Upstream 100 bases:

>100_bases
CGACAGCTCTCGGCCGTCTGGCGGAGCGAGACCTGCGGAGTACAATCGATTCATCCTTCCACCTCCAGCGCAACGCAGGA
ACGTACTTCGGACTCGCTTC

Downstream 100 bases:

>100_bases
GAAGAAAGCCGGGTCTTATCCCAGCATGGCGGGCAGGCACACGCCCGCCGGCTGGTGGATCACGAGGTCCGCCGTTGCAT
CCAGGGCGCTTGGCTCCGGA

Product: transaldolase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTQLDQLKQFTTVVADTGDFQAMRAYAPHDATTNPSLILKAVQKAEYRPLLEQAVRDARSDSVEDIIDAVLVAFGCEILS
IIPGRVSTEVDARLSFDTEATVAKAKHLIALYEARGVARERVLIKIASTWEGIRAADQLRAEGIRCNMTLLFSLAQAVAC
AEAGVQLISPFVGRIYDWYKKDAGANWDPIAQGGPNDPGVQSVLRIYNYYKKFDYPTEVMGASFRNISQIVELAGCDLLT
ISPDLLAQLQQSDAPVERKLSPDNANAANIVRLPADEKSFRWHMNADAMATEKLAEGIRLFAADAIKLEALIEPLRAAA

Sequences:

>Translated_319_residues
MTQLDQLKQFTTVVADTGDFQAMRAYAPHDATTNPSLILKAVQKAEYRPLLEQAVRDARSDSVEDIIDAVLVAFGCEILS
IIPGRVSTEVDARLSFDTEATVAKAKHLIALYEARGVARERVLIKIASTWEGIRAADQLRAEGIRCNMTLLFSLAQAVAC
AEAGVQLISPFVGRIYDWYKKDAGANWDPIAQGGPNDPGVQSVLRIYNYYKKFDYPTEVMGASFRNISQIVELAGCDLLT
ISPDLLAQLQQSDAPVERKLSPDNANAANIVRLPADEKSFRWHMNADAMATEKLAEGIRLFAADAIKLEALIEPLRAAA
>Mature_318_residues
TQLDQLKQFTTVVADTGDFQAMRAYAPHDATTNPSLILKAVQKAEYRPLLEQAVRDARSDSVEDIIDAVLVAFGCEILSI
IPGRVSTEVDARLSFDTEATVAKAKHLIALYEARGVARERVLIKIASTWEGIRAADQLRAEGIRCNMTLLFSLAQAVACA
EAGVQLISPFVGRIYDWYKKDAGANWDPIAQGGPNDPGVQSVLRIYNYYKKFDYPTEVMGASFRNISQIVELAGCDLLTI
SPDLLAQLQQSDAPVERKLSPDNANAANIVRLPADEKSFRWHMNADAMATEKLAEGIRLFAADAIKLEALIEPLRAAA

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 1 subfamily

Homologues:

Organism=Homo sapiens, GI5803187, Length=316, Percent_Identity=59.1772151898734, Blast_Score=366, Evalue=1e-101,
Organism=Escherichia coli, GI1786189, Length=319, Percent_Identity=57.6802507836991, Blast_Score=348, Evalue=2e-97,
Organism=Escherichia coli, GI1788807, Length=318, Percent_Identity=56.2893081761006, Blast_Score=348, Evalue=3e-97,
Organism=Caenorhabditis elegans, GI25153750, Length=322, Percent_Identity=57.1428571428571, Blast_Score=346, Evalue=1e-95,
Organism=Caenorhabditis elegans, GI25153752, Length=168, Percent_Identity=60.7142857142857, Blast_Score=191, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17570473, Length=96, Percent_Identity=58.3333333333333, Blast_Score=98, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6321480, Length=322, Percent_Identity=52.7950310559006, Blast_Score=322, Evalue=4e-89,
Organism=Saccharomyces cerevisiae, GI6323386, Length=320, Percent_Identity=56.5625, Blast_Score=316, Evalue=3e-87,
Organism=Drosophila melanogaster, GI45549185, Length=320, Percent_Identity=58.4375, Blast_Score=367, Evalue=1e-102,

Paralogues:

None

Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): TAL_RALPJ (B2U9W5)

Other databases:

- EMBL:   CP001068
- RefSeq:   YP_001898655.1
- ProteinModelPortal:   B2U9W5
- SMR:   B2U9W5
- GeneID:   6286395
- GenomeReviews:   CP001068_GR
- KEGG:   rpi:Rpic_1075
- HOGENOM:   HBG286747
- OMA:   GCEILAI
- ProtClustDB:   PRK05269
- GO:   GO:0005737
- HAMAP:   MF_00492
- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004730
- InterPro:   IPR018225
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10683
- PANTHER:   PTHR10683:SF3
- TIGRFAMs:   TIGR00874

Pfam domain/function: PF00923 Transaldolase

EC number: =2.2.1.2

Molecular weight: Translated: 34982; Mature: 34851

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2

Important sites: ACT_SITE 125-125

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLDQLKQFTTVVADTGDFQAMRAYAPHDATTNPSLILKAVQKAEYRPLLEQAVRDARS
CCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DSVEDIIDAVLVAFGCEILSIIPGRVSTEVDARLSFDTEATVAKAKHLIALYEARGVARE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCEECCCCHHHHHHHHHHHHHHHHHCHHHH
RVLIKIASTWEGIRAADQLRAEGIRCNMTLLFSLAQAVACAEAGVQLISPFVGRIYDWYK
HHHEEEHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDAGANWDPIAQGGPNDPGVQSVLRIYNYYKKFDYPTEVMGASFRNISQIVELAGCDLLT
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEE
ISPDLLAQLQQSDAPVERKLSPDNANAANIVRLPADEKSFRWHMNADAMATEKLAEGIRL
ECHHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHH
FAADAIKLEALIEPLRAAA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQLDQLKQFTTVVADTGDFQAMRAYAPHDATTNPSLILKAVQKAEYRPLLEQAVRDARS
CHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
DSVEDIIDAVLVAFGCEILSIIPGRVSTEVDARLSFDTEATVAKAKHLIALYEARGVARE
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCEECCCCHHHHHHHHHHHHHHHHHCHHHH
RVLIKIASTWEGIRAADQLRAEGIRCNMTLLFSLAQAVACAEAGVQLISPFVGRIYDWYK
HHHEEEHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDAGANWDPIAQGGPNDPGVQSVLRIYNYYKKFDYPTEVMGASFRNISQIVELAGCDLLT
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEE
ISPDLLAQLQQSDAPVERKLSPDNANAANIVRLPADEKSFRWHMNADAMATEKLAEGIRL
ECHHHHHHHHHCCCCHHHCCCCCCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHH
FAADAIKLEALIEPLRAAA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA