| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yggX [C]
Identifier: 187928170
GI number: 187928170
Start: 1145683
End: 1145958
Strand: Reverse
Name: yggX [C]
Synonym: Rpic_1077
Alternate gene names: 187928170
Gene position: 1145958-1145683 (Counterclockwise)
Preceding gene: 187928171
Following gene: 187928168
Centisome position: 29.07
GC content: 61.59
Gene sequence:
>276_bases ATGGCCCGCATGGTCCACTGCGTCAAGCTCAACAAGGAAGCCGAAGGTCTCGACTTCCCGCCCCTGCCCGGCGAACTGGG CAAGAAACTCTGGCAAAGCGTCTCGAAGGAAGCATGGGCCGGCTGGCTCAAGCACCAGACCATGCTGATCAACGAAAACC GCCTGAACATGGCCGATTCGCGCGCACGCCAGTACCTGCTCAAGCAGACCGAGAAGTACTTCTTTGGCGATGGTGCAGAT GAAGCCGCCGGCTACGTGCCGCCGCCCTCGGCCTGA
Upstream 100 bases:
>100_bases GCGTGCGTCGTGGAATCCAAGCCCGGCGGCGCGCGACCTTTACAATAGCGGCACCTGCGTCGCGCTTGAGCGGCGCTTCC GCCACACAAGAGGAACCCCC
Downstream 100 bases:
>100_bases TCTGCCGCCATCAACAACAAAGCCGTTCAGCGCAAACTGAACGGCTTTTTGTTTGGGCAACGCCATTGAACGTGCCGCAA CGGGCGCAAAAAAAACTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MARMVHCVKLNKEAEGLDFPPLPGELGKKLWQSVSKEAWAGWLKHQTMLINENRLNMADSRARQYLLKQTEKYFFGDGAD EAAGYVPPPSA
Sequences:
>Translated_91_residues MARMVHCVKLNKEAEGLDFPPLPGELGKKLWQSVSKEAWAGWLKHQTMLINENRLNMADSRARQYLLKQTEKYFFGDGAD EAAGYVPPPSA >Mature_90_residues ARMVHCVKLNKEAEGLDFPPLPGELGKKLWQSVSKEAWAGWLKHQTMLINENRLNMADSRARQYLLKQTEKYFFGDGADE AAGYVPPPSA
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes [H]
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family [H]
Homologues:
Organism=Escherichia coli, GI1789332, Length=87, Percent_Identity=44.8275862068966, Blast_Score=86, Evalue=6e-19,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007457 - ProDom: PD029191 [H]
Pfam domain/function: PF04362 Iron_traffic [H]
EC number: NA
Molecular weight: Translated: 10278; Mature: 10147
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMVHCVKLNKEAEGLDFPPLPGELGKKLWQSVSKEAWAGWLKHQTMLINENRLNMADS CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHH RARQYLLKQTEKYFFGDGADEAAGYVPPPSA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARMVHCVKLNKEAEGLDFPPLPGELGKKLWQSVSKEAWAGWLKHQTMLINENRLNMADS CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHH RARQYLLKQTEKYFFGDGADEAAGYVPPPSA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA