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The map label for this gene is rodZ [H]

Identifier: 187928151

GI number: 187928151

Start: 1123907

End: 1124989

Strand: Direct

Name: rodZ [H]

Synonym: Rpic_1058

Alternate gene names: 187928151

Gene position: 1123907-1124989 (Clockwise)

Preceding gene: 187928150

Following gene: 187928152

Centisome position: 28.51

GC content: 66.11

Gene sequence:

>1083_bases
ATGACTGACCGCGAGGTGGCAAGCGCTGCCGATTTTTCTCATGGCGCGGCGCCTGTCTCGAATCCGCCTGCCGCCCCTTC
GCCGGAGCGCGACGATGCGCTGCGCGAGATTGCCGAACGTCTGCGTGCCGGCCGTGAGCGTCAACGGCTGACTGTCGACG
ATCTGGCCACGCGCCTGAAAGTGGCCCCGGGCAAGTTGTTGGCGGTGGAATCGGCGGATGTCAGTGCGTTGCCTGACATG
ACGTTTACCAAGGGCCTCATGCGCGCCTATGCGCGCGCCCTGCAGGTCGATGTCGATGACCAGGTTGCGCGTTTGAACGC
GCGTGCGCCGGTCACCAACATCGGCTTGCGTCCCGAGGGCGGGCTGGGTGAATCGTTTTCCGACAAGCCGAGTTTCGCCA
AGCGTCGCGGCGGCAATGGCCGCTGGCTGATTGGTGCGCTGGTTGCGGTGATTGTGGCGGCCGGTGCGCTGGCCGGTATG
GACCGTCTGAAGCAATGGTTCGCCACGCAAACGGCAGCCACGCAAAATACCGAATCCACCGCGAAGGAAACGCCGGCTGC
GGAGCAAACCGCGCCCGCGCAAGTGGCTCCAGCAACTGAGCAGGCTCCGTCCGAAACGCCGGCCGCTTCGATGCCGACAC
CGCTGACGCCTGTTACACCGGCCGCTCCAGCATCGGGTGTGGTGACTGCGCCATTGGCGCCGCCGCCTACGCTGCCGCGT
TCGGACAACGGTGCCGTTCCGGCGCCCGCCGTAGCGGCTGCGGGTGGCAAGCCGGCTGTCATCAACGTCGAGGCTCCGGT
CGCTGCTCTGCCGACAGAAGCTGCCAAGCCGGCTGAATCGGGCGGCGGTTCGGTCTCGGTGCGCTTCTCCGGTTCGTCTT
GGTACGAGATCAAGGACAAGACCGGCAAGACGCTCGCCAGTGGCATTTCCAAGGAAGGCGACGCGCGTGATCTGACCGGC
ACGCCGCCGTTCAAGGTCGTCTTCGGCAATGCAGGAGCCGTTGAATCGCTGGCCGTGGGTGGCGCGACCGTCGATCTGCA
GAAGTACGCCCGCAATCGCGTGGCACGGGCCACGTTGCCCTGA

Upstream 100 bases:

>100_bases
CGCCTCGGCGACACTTCGCAGCAGAACGCATGGAGCGCGCAATTGCAGCGCCGCTTCCCCAATGCGCCCGAAGAGGCGGC
ATTCGAACGAGGAGCCTGGG

Downstream 100 bases:

>100_bases
ACCGTTTTGTAATTGGCGCGGTGCCTGTAGGCAGCGCGCCCTGTCTGATCATGGAAATCTCCACGCCTCTCGATTGCGCT
CCAGCCTTGGTGGGCCCGCT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MTDREVASAADFSHGAAPVSNPPAAPSPERDDALREIAERLRAGRERQRLTVDDLATRLKVAPGKLLAVESADVSALPDM
TFTKGLMRAYARALQVDVDDQVARLNARAPVTNIGLRPEGGLGESFSDKPSFAKRRGGNGRWLIGALVAVIVAAGALAGM
DRLKQWFATQTAATQNTESTAKETPAAEQTAPAQVAPATEQAPSETPAASMPTPLTPVTPAAPASGVVTAPLAPPPTLPR
SDNGAVPAPAVAAAGGKPAVINVEAPVAALPTEAAKPAESGGGSVSVRFSGSSWYEIKDKTGKTLASGISKEGDARDLTG
TPPFKVVFGNAGAVESLAVGGATVDLQKYARNRVARATLP

Sequences:

>Translated_360_residues
MTDREVASAADFSHGAAPVSNPPAAPSPERDDALREIAERLRAGRERQRLTVDDLATRLKVAPGKLLAVESADVSALPDM
TFTKGLMRAYARALQVDVDDQVARLNARAPVTNIGLRPEGGLGESFSDKPSFAKRRGGNGRWLIGALVAVIVAAGALAGM
DRLKQWFATQTAATQNTESTAKETPAAEQTAPAQVAPATEQAPSETPAASMPTPLTPVTPAAPASGVVTAPLAPPPTLPR
SDNGAVPAPAVAAAGGKPAVINVEAPVAALPTEAAKPAESGGGSVSVRFSGSSWYEIKDKTGKTLASGISKEGDARDLTG
TPPFKVVFGNAGAVESLAVGGATVDLQKYARNRVARATLP
>Mature_359_residues
TDREVASAADFSHGAAPVSNPPAAPSPERDDALREIAERLRAGRERQRLTVDDLATRLKVAPGKLLAVESADVSALPDMT
FTKGLMRAYARALQVDVDDQVARLNARAPVTNIGLRPEGGLGESFSDKPSFAKRRGGNGRWLIGALVAVIVAAGALAGMD
RLKQWFATQTAATQNTESTAKETPAAEQTAPAQVAPATEQAPSETPAASMPTPLTPVTPAAPASGVVTAPLAPPPTLPRS
DNGAVPAPAVAAAGGKPAVINVEAPVAALPTEAAKPAESGGGSVSVRFSGSSWYEIKDKTGKTLASGISKEGDARDLTGT
PPFKVVFGNAGAVESLAVGGATVDLQKYARNRVARATLP

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=332, Percent_Identity=29.8192771084337, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 36829; Mature: 36698

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDREVASAADFSHGAAPVSNPPAAPSPERDDALREIAERLRAGRERQRLTVDDLATRLK
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHC
VAPGKLLAVESADVSALPDMTFTKGLMRAYARALQVDVDDQVARLNARAPVTNIGLRPEG
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCCC
GLGESFSDKPSFAKRRGGNGRWLIGALVAVIVAAGALAGMDRLKQWFATQTAATQNTEST
CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AKETPAAEQTAPAQVAPATEQAPSETPAASMPTPLTPVTPAAPASGVVTAPLAPPPTLPR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
SDNGAVPAPAVAAAGGKPAVINVEAPVAALPTEAAKPAESGGGSVSVRFSGSSWYEIKDK
CCCCCCCCCHHHHCCCCCEEEEECCCCHHCCCHHCCCCCCCCCEEEEEECCCCEEEECCC
TGKTLASGISKEGDARDLTGTPPFKVVFGNAGAVESLAVGGATVDLQKYARNRVARATLP
CCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDREVASAADFSHGAAPVSNPPAAPSPERDDALREIAERLRAGRERQRLTVDDLATRLK
CCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHC
VAPGKLLAVESADVSALPDMTFTKGLMRAYARALQVDVDDQVARLNARAPVTNIGLRPEG
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEECCCCCCC
GLGESFSDKPSFAKRRGGNGRWLIGALVAVIVAAGALAGMDRLKQWFATQTAATQNTEST
CCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AKETPAAEQTAPAQVAPATEQAPSETPAASMPTPLTPVTPAAPASGVVTAPLAPPPTLPR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
SDNGAVPAPAVAAAGGKPAVINVEAPVAALPTEAAKPAESGGGSVSVRFSGSSWYEIKDK
CCCCCCCCCHHHHCCCCCEEEEECCCCHHCCCHHCCCCCCCCCEEEEEECCCCEEEECCC
TGKTLASGISKEGDARDLTGTPPFKVVFGNAGAVESLAVGGATVDLQKYARNRVARATLP
CCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA