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The map label for this gene is 187928150

Identifier: 187928150

GI number: 187928150

Start: 1123117

End: 1123914

Strand: Direct

Name: 187928150

Synonym: Rpic_1057

Alternate gene names: NA

Gene position: 1123117-1123914 (Clockwise)

Preceding gene: 187928149

Following gene: 187928151

Centisome position: 28.49

GC content: 62.28

Gene sequence:

>798_bases
ATGAAGCGTTGGTCGACTGCTGTCAGTCTGGTCTTCACGCTGGCAGCCGCCGGGTGCGCGTTGTCGCCGCCGGTCCAGAC
ACAGACACGAGAAGTTACAACAGTACCCGATCAAAAGGCCGACGCCGGTCGCCGGGCCGCGATCCGATTACAACTCGCGA
CGCAGTACCTGGAAGCCGGCCAGAATGCGACAGCGCTTGAGGAAATCAAGAACGCCATCGCGATCGACTCGAACGTGCCG
AATGCGTATCACATCCGCGCGCTGGCTTACATGAACCTTGGTCAACGCGAACAGGCTGACGAGAGTTTCCGCAGCGCTCT
GGCCGCGACACCACGAGACGGTGACCTGCTGAACAACTACGGCTGGTTCCTGTGCTCGCAAGGCGGCAAGCCAGATCAAG
GCATGGCGATGCTGCGCCAAGCCATCGAGGCGCCGGCCGCCGGCAGCCCCGCCAAACCGTGGACGAACCTGGGCGTTTGC
CAGATGCGTCAGGGCGATCTGGATGGCGCCGAGAAGAGCTTGACGCGCGCTACCTACATCGATGCAAACAATTCGCTGAC
CAACCTGACATTGGCGCAGCTGTACTACAAACGCCGCGAATATTCGCGTGCCATGCCGTTTATCGAGCGTGTGAATGGCC
GCGGCAATCCGACGGCAGAAAGCCTGTGGCTGGGCGCTCGCATCGCGCGCCGCCTCGGCGACACTTCGCAGCAGAACGCA
TGGAGCGCGCAATTGCAGCGCCGCTTCCCCAATGCGCCCGAAGAGGCGGCATTCGAACGAGGAGCCTGGGATGACTGA

Upstream 100 bases:

>100_bases
AGGTCAAGGACCGCACGCGCTTGGCCGAGCGCGGCAAGTTCGGCAAGATCGTCGAGATCCCCGTGGTCGGGGCCGACTCA
ACTCACCGCATGGGTACCGC

Downstream 100 bases:

>100_bases
CCGCGAGGTGGCAAGCGCTGCCGATTTTTCTCATGGCGCGGCGCCTGTCTCGAATCCGCCTGCCGCCCCTTCGCCGGAGC
GCGACGATGCGCTGCGCGAG

Product: type IV pilus biogenesis/stability protein PilW

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilF; Fimbrial Biogenesis Protein; Fimbrial Biogenesis And Twitching Motility Protein; TPR Repeat-Containing Protein; Type 4 Fimbrial Biogenesis Protein; Type IV Pili Biogenesis Protein PilF; Type IV Pilus Assembly Protein PilF; Type 4 Fimbrial Biogenesis Protein PilF; Pilus Assembly Protein; PilF Type IV Pilus Assembly Protein; TPR Repeat-Containing Pilus Assembly Protein PilF; Type Iv Pilus Biogenesis/Stability Protein Pilw; Type IV Fimbrial Biogenesis Protein; Tpr Repeat Protein; Fimbrial Assembly Protein; LysM Domain-Containing Protein; Tfp Pilus Assembly Protein PilF; Protein Involved In Fimbrial Biogenesis; Type 4 Pilus Biogenesis Protein; TPR Domain-Containing Protein; Type IV Pilus Biogenesis Protein Pilf; Lipoprotein

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKRWSTAVSLVFTLAAAGCALSPPVQTQTREVTTVPDQKADAGRRAAIRLQLATQYLEAGQNATALEEIKNAIAIDSNVP
NAYHIRALAYMNLGQREQADESFRSALAATPRDGDLLNNYGWFLCSQGGKPDQGMAMLRQAIEAPAAGSPAKPWTNLGVC
QMRQGDLDGAEKSLTRATYIDANNSLTNLTLAQLYYKRREYSRAMPFIERVNGRGNPTAESLWLGARIARRLGDTSQQNA
WSAQLQRRFPNAPEEAAFERGAWDD

Sequences:

>Translated_265_residues
MKRWSTAVSLVFTLAAAGCALSPPVQTQTREVTTVPDQKADAGRRAAIRLQLATQYLEAGQNATALEEIKNAIAIDSNVP
NAYHIRALAYMNLGQREQADESFRSALAATPRDGDLLNNYGWFLCSQGGKPDQGMAMLRQAIEAPAAGSPAKPWTNLGVC
QMRQGDLDGAEKSLTRATYIDANNSLTNLTLAQLYYKRREYSRAMPFIERVNGRGNPTAESLWLGARIARRLGDTSQQNA
WSAQLQRRFPNAPEEAAFERGAWDD
>Mature_265_residues
MKRWSTAVSLVFTLAAAGCALSPPVQTQTREVTTVPDQKADAGRRAAIRLQLATQYLEAGQNATALEEIKNAIAIDSNVP
NAYHIRALAYMNLGQREQADESFRSALAATPRDGDLLNNYGWFLCSQGGKPDQGMAMLRQAIEAPAAGSPAKPWTNLGVC
QMRQGDLDGAEKSLTRATYIDANNSLTNLTLAQLYYKRREYSRAMPFIERVNGRGNPTAESLWLGARIARRLGDTSQQNA
WSAQLQRRFPNAPEEAAFERGAWDD

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29121; Mature: 29121

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWSTAVSLVFTLAAAGCALSPPVQTQTREVTTVPDQKADAGRRAAIRLQLATQYLEAG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
QNATALEEIKNAIAIDSNVPNAYHIRALAYMNLGQREQADESFRSALAATPRDGDLLNNY
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHCC
GWFLCSQGGKPDQGMAMLRQAIEAPAAGSPAKPWTNLGVCQMRQGDLDGAEKSLTRATYI
CEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHEEE
DANNSLTNLTLAQLYYKRREYSRAMPFIERVNGRGNPTAESLWLGARIARRLGDTSQQNA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHH
WSAQLQRRFPNAPEEAAFERGAWDD
HHHHHHHHCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MKRWSTAVSLVFTLAAAGCALSPPVQTQTREVTTVPDQKADAGRRAAIRLQLATQYLEAG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
QNATALEEIKNAIAIDSNVPNAYHIRALAYMNLGQREQADESFRSALAATPRDGDLLNNY
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHCC
GWFLCSQGGKPDQGMAMLRQAIEAPAAGSPAKPWTNLGVCQMRQGDLDGAEKSLTRATYI
CEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHEEE
DANNSLTNLTLAQLYYKRREYSRAMPFIERVNGRGNPTAESLWLGARIARRLGDTSQQNA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHH
WSAQLQRRFPNAPEEAAFERGAWDD
HHHHHHHHCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA