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The map label for this gene is 187928112

Identifier: 187928112

GI number: 187928112

Start: 1079047

End: 1079445

Strand: Direct

Name: 187928112

Synonym: Rpic_1019

Alternate gene names: NA

Gene position: 1079047-1079445 (Clockwise)

Preceding gene: 187928111

Following gene: 187928113

Centisome position: 27.37

GC content: 59.65

Gene sequence:

>399_bases
ATGGACGGGCAGAAGAAGCGAACGCAGAGGGACTACACGCTGGCTTTTAAGTTGGCAGTGGTTGAGCAGGTGGAAAAAGG
CGAGCTGACCTACAAAGAGGCGCAGCGACGCTATGGCATTCAGGGTCGCTCGACGGTGCTGGTATGGTTGCGCAAGCACG
GACGACAGGACTGGAGCGCCTCGGCGGCGGCCAAAACCACGATGGGAAATCAAACCAGCCAGCGCAAGCCGCTCACGCCT
GAGCAGCGCATCAAGGAATTGGAAGTGCAGTTGCGGGAGGCCCAAGAGAAGGCACGCCTGTTCGAGGCGGTGATCGACGT
GATCCAGAAAGAGCATGGGGCGCGCGTCGTAAAAAAGCCTTCGGGCAGGTCCTCACGCAAAAGCTCGTCCAAGGGCTGA

Upstream 100 bases:

>100_bases
AATAGAAAAAAGCCACGCAGCTACGCGTGGCTTTTTTTTGTTCGCTGACCCGTCCTGAATAAGGTTGACACTTTTTCCCC
GCCAGGGAGTGAGGGTCAAG

Downstream 100 bases:

>100_bases
GTGTGGGCAGGGCCTGCCGCTACATTGGCATCAGCCGCCAAGCGTACTACAAACGCCAGCAAAGCGAGACACGGCAAATC
GCGCGTGAGGCCAAGGTCTG

Product: ISPsy11, transposase OrfA

Products: NA

Alternate protein names: ISPsy11 Transposase OrfA; Cytoplasmic Protein; Transposase OrfA; ISVisp4 Transposase OrfA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MDGQKKRTQRDYTLAFKLAVVEQVEKGELTYKEAQRRYGIQGRSTVLVWLRKHGRQDWSASAAAKTTMGNQTSQRKPLTP
EQRIKELEVQLREAQEKARLFEAVIDVIQKEHGARVVKKPSGRSSRKSSSKG

Sequences:

>Translated_132_residues
MDGQKKRTQRDYTLAFKLAVVEQVEKGELTYKEAQRRYGIQGRSTVLVWLRKHGRQDWSASAAAKTTMGNQTSQRKPLTP
EQRIKELEVQLREAQEKARLFEAVIDVIQKEHGARVVKKPSGRSSRKSSSKG
>Mature_132_residues
MDGQKKRTQRDYTLAFKLAVVEQVEKGELTYKEAQRRYGIQGRSTVLVWLRKHGRQDWSASAAAKTTMGNQTSQRKPLTP
EQRIKELEVQLREAQEKARLFEAVIDVIQKEHGARVVKKPSGRSSRKSSSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15081; Mature: 15081

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGQKKRTQRDYTLAFKLAVVEQVEKGELTYKEAQRRYGIQGRSTVLVWLRKHGRQDWSA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCH
SAAAKTTMGNQTSQRKPLTPEQRIKELEVQLREAQEKARLFEAVIDVIQKEHGARVVKKP
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
SGRSSRKSSSKG
CCCCCCCCCCCC
>Mature Secondary Structure
MDGQKKRTQRDYTLAFKLAVVEQVEKGELTYKEAQRRYGIQGRSTVLVWLRKHGRQDWSA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCH
SAAAKTTMGNQTSQRKPLTPEQRIKELEVQLREAQEKARLFEAVIDVIQKEHGARVVKKP
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
SGRSSRKSSSKG
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA