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The map label for this gene is yejE [H]

Identifier: 187928109

GI number: 187928109

Start: 1075259

End: 1076383

Strand: Direct

Name: yejE [H]

Synonym: Rpic_1016

Alternate gene names: 187928109

Gene position: 1075259-1076383 (Clockwise)

Preceding gene: 187928108

Following gene: 187928110

Centisome position: 27.27

GC content: 61.96

Gene sequence:

>1125_bases
ATGACCCAGTATTCGCGCACTTCAACGCATGCACCCAACACGGCAGCGCCACATCCGGTGCGCCACTCGCCGTCGCCGCT
CAAGCGCGCGTGGCGGCGCTTCAAGCAGCATCGGCTGGGCTATTGGAGCCTGCTCATCTTCGTGGTGCTGTTCGTGCTCA
GTCTGGGCGCCGAGTGCATCTCCAATGATCGGCCGCTGGTGGTCAGGTACCACGGCAACTGGTATTTCCCGATCGTGAAG
GCATACCCCGAGATGACCTTCGGGGGGGATTTCCCCACACCGACGGACTACCTTGATCCGTTCATCCGGGACAAGTTCAA
GGAGCCGGGAAGCTTTGCGATTTACCCGCCCAATCCGTATTCGTACGAGACGCTGAACTACTTTTCGAAAGAGCCCAATC
CGGCGCCCCCTTCTGCGGAAAACTGGCTCGGCACAGATGATCGCGGCCGCGACGTGTTTGCGCGGCTGCTGTATGGCTTC
CGTGTCTCGGTGCTGTTCGGGCTGGCGCTTACGGTGCTTGGCGTGCTGGTCGGCACGCTGACCGGCGCGCTGATGGGCTT
CTTCGGCGGGCGCTTCGATATGGTGTCGCAGCGCCTGATTGAAATCTGGAGTTCGATGCCGGAGCTGTACCTGCTGATCA
TCTTCGCGTCGATCTTCACCCCCAGCCTTGGGCTGCTGATCATCCTGCTGTCGCTGTTCGGCTGGATGAGCCTGTCGGAT
TACGTGCGCGCCGAGTTCTACCGTAACCGCTCGCTCGACTATGTGAAGGCCGCGCGAGCGATGGGCCTGTCCAGTTGGCA
GATCATGTGGCGCCACATCATGCCCAACAGCCTGACACCGGTGATCACGTTCCTGCCGTTCCGCATGAGCGCGGCCATTC
TTGCGCTCACGAGCCTCGATTTCCTTGGCCTTGGCGTACCGCCATCCACCCCGAGCCTCGGTGAGCTGCTTGCCCAGGGT
AAGGCCAACCTGGACGCGTGGTGGATCTCGCTGTCGACTTTCGTGGTGCTCGTGCTGACCCTCGTGCTGCTGACTTTCAT
GGGCGACGCGCTGCGCGATGCCTTCGACACGCGCCTGTCATTCGCGCAACTGCGCACGCGCCAGAAACCGGCGGGGGTGA
AATGA

Upstream 100 bases:

>100_bases
TGATTGGCCTGGCTGCGCGGTTGATTTCCGACGTGTGCTACGTGCTGGTTGATCCGCGTATCCATTTCGGCTCGGTTGGG
CGATAGGCGGGCCGGCGACC

Downstream 100 bases:

>100_bases
CCCGCGTCGATCTGCGTTCCTCAGCGCCGAAGTACGACGGCCCGCTGCTGCGCCTGGATGACCTGTGCGTGCATTTCGAA
TCCGAGCACGGCGAGGTGAC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTQYSRTSTHAPNTAAPHPVRHSPSPLKRAWRRFKQHRLGYWSLLIFVVLFVLSLGAECISNDRPLVVRYHGNWYFPIVK
AYPEMTFGGDFPTPTDYLDPFIRDKFKEPGSFAIYPPNPYSYETLNYFSKEPNPAPPSAENWLGTDDRGRDVFARLLYGF
RVSVLFGLALTVLGVLVGTLTGALMGFFGGRFDMVSQRLIEIWSSMPELYLLIIFASIFTPSLGLLIILLSLFGWMSLSD
YVRAEFYRNRSLDYVKAARAMGLSSWQIMWRHIMPNSLTPVITFLPFRMSAAILALTSLDFLGLGVPPSTPSLGELLAQG
KANLDAWWISLSTFVVLVLTLVLLTFMGDALRDAFDTRLSFAQLRTRQKPAGVK

Sequences:

>Translated_374_residues
MTQYSRTSTHAPNTAAPHPVRHSPSPLKRAWRRFKQHRLGYWSLLIFVVLFVLSLGAECISNDRPLVVRYHGNWYFPIVK
AYPEMTFGGDFPTPTDYLDPFIRDKFKEPGSFAIYPPNPYSYETLNYFSKEPNPAPPSAENWLGTDDRGRDVFARLLYGF
RVSVLFGLALTVLGVLVGTLTGALMGFFGGRFDMVSQRLIEIWSSMPELYLLIIFASIFTPSLGLLIILLSLFGWMSLSD
YVRAEFYRNRSLDYVKAARAMGLSSWQIMWRHIMPNSLTPVITFLPFRMSAAILALTSLDFLGLGVPPSTPSLGELLAQG
KANLDAWWISLSTFVVLVLTLVLLTFMGDALRDAFDTRLSFAQLRTRQKPAGVK
>Mature_373_residues
TQYSRTSTHAPNTAAPHPVRHSPSPLKRAWRRFKQHRLGYWSLLIFVVLFVLSLGAECISNDRPLVVRYHGNWYFPIVKA
YPEMTFGGDFPTPTDYLDPFIRDKFKEPGSFAIYPPNPYSYETLNYFSKEPNPAPPSAENWLGTDDRGRDVFARLLYGFR
VSVLFGLALTVLGVLVGTLTGALMGFFGGRFDMVSQRLIEIWSSMPELYLLIIFASIFTPSLGLLIILLSLFGWMSLSDY
VRAEFYRNRSLDYVKAARAMGLSSWQIMWRHIMPNSLTPVITFLPFRMSAAILALTSLDFLGLGVPPSTPSLGELLAQGK
ANLDAWWISLSTFVVLVLTLVLLTFMGDALRDAFDTRLSFAQLRTRQKPAGVK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=333, Percent_Identity=49.8498498498498, Blast_Score=348, Evalue=4e-97,
Organism=Escherichia coli, GI1787054, Length=240, Percent_Identity=29.1666666666667, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787760, Length=238, Percent_Identity=35.2941176470588, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1789964, Length=233, Percent_Identity=36.0515021459227, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787498, Length=250, Percent_Identity=32.4, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1789889, Length=228, Percent_Identity=27.1929824561404, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787549, Length=252, Percent_Identity=29.3650793650794, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 42218; Mature: 42087

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQYSRTSTHAPNTAAPHPVRHSPSPLKRAWRRFKQHRLGYWSLLIFVVLFVLSLGAECI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHH
SNDRPLVVRYHGNWYFPIVKAYPEMTFGGDFPTPTDYLDPFIRDKFKEPGSFAIYPPNPY
CCCCCEEEEECCCEEEHHHHHCCCCCCCCCCCCCHHHHCHHHHHHCCCCCCEEEECCCCC
SYETLNYFSKEPNPAPPSAENWLGTDDRGRDVFARLLYGFRVSVLFGLALTVLGVLVGTL
CCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGALMGFFGGRFDMVSQRLIEIWSSMPELYLLIIFASIFTPSLGLLIILLSLFGWMSLSD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YVRAEFYRNRSLDYVKAARAMGLSSWQIMWRHIMPNSLTPVITFLPFRMSAAILALTSLD
HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLGLGVPPSTPSLGELLAQGKANLDAWWISLSTFVVLVLTLVLLTFMGDALRDAFDTRLS
HHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQLRTRQKPAGVK
HHHHHHCCCCCCCC
>Mature Secondary Structure 
TQYSRTSTHAPNTAAPHPVRHSPSPLKRAWRRFKQHRLGYWSLLIFVVLFVLSLGAECI
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHH
SNDRPLVVRYHGNWYFPIVKAYPEMTFGGDFPTPTDYLDPFIRDKFKEPGSFAIYPPNPY
CCCCCEEEEECCCEEEHHHHHCCCCCCCCCCCCCHHHHCHHHHHHCCCCCCEEEECCCCC
SYETLNYFSKEPNPAPPSAENWLGTDDRGRDVFARLLYGFRVSVLFGLALTVLGVLVGTL
CCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGALMGFFGGRFDMVSQRLIEIWSSMPELYLLIIFASIFTPSLGLLIILLSLFGWMSLSD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
YVRAEFYRNRSLDYVKAARAMGLSSWQIMWRHIMPNSLTPVITFLPFRMSAAILALTSLD
HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
FLGLGVPPSTPSLGELLAQGKANLDAWWISLSTFVVLVLTLVLLTFMGDALRDAFDTRLS
HHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQLRTRQKPAGVK
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]