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The map label for this gene is yejB [H]

Identifier: 187928108

GI number: 187928108

Start: 1074192

End: 1075244

Strand: Direct

Name: yejB [H]

Synonym: Rpic_1015

Alternate gene names: 187928108

Gene position: 1074192-1075244 (Clockwise)

Preceding gene: 187928107

Following gene: 187928109

Centisome position: 27.25

GC content: 60.11

Gene sequence:

>1053_bases
ATGTTCGCGTACCTGATCAAACGGTTGCTGCTTCTGATCCCGACGCTGATCGGCGTGGTCACGCTGACGTTCGTCGTGAT
CCAGTTCGTGCCTGGCGGCCCCATCGAACAGATGATGATGGAGATGAAGGGGCGAGGCGGCGGAGGCGAGGCCAGCGGTG
GCGGCGCGTTCGACTATCGCGGGCGTCGCGGCGTAGACGCCGAGAAGATCAAGGAAATCCGCGCGTTGTATGGCTTCGAC
AAGAGCCCCGTCGAGCGCTACTTCCTGATGCTCGGCCGCTTTGCGCGCTTCGACTTGGGCGAGAGCTATTTCCAGCACCG
CAGCGTGTGGGATCTCATCAAGTCGAAATTGCCGGTATCGATTTCGATCGGGTTGTGGACGTTCTTTCTCACGTACCTGA
TAGCTGTGCCGCTCGGCATTGCGAAGGCCGTGCGTGCGGGCAGTCGGTTTGATCTGGTGACGAGCATCATCGTGCTGGTG
GGGTATGCCATCCCGGGCTTCGTGCTGGGCGTGCTGCTGCTGGTGCTCTTTGGTGGCGGCACGTTCTTCCAGTGGTTCCC
GATCCGGGGCATCACTTCCGACAACTGGGATCAGCTCAGCCTGCTCGGCAAAATCACGGATTACCTTTGGCACATCACGC
TGCCTGTCATGGCGTCGGTGGTGGGCAGCTTTGCCGTCATCACCATGCTGACGAAGAACGCGTTCCTGGAGGAAATCCGC
AAACAGTATGTGCTGACCGCGCGTAGCAAGGGCTTGTCGGAGCGGCGCGTGCTGTGGAAGCACATTTTCCGCAACGCGTT
GCTGCCGCTGGTGACGGGCTTCCCGTCGGCCTTCATTGGCGCATTCTTCACAGGTTCGCTGCTCATCGAGCAACTGTTCT
CGCTTGATGGCATGGGCCTGCTGTCGTATGAGGCGGTGATGCGACGCGATTATCCGGTCGTGCTCGGCACGCTGTACTTG
TTCACGCTGATTGGCCTGGCTGCGCGGTTGATTTCCGACGTGTGCTACGTGCTGGTTGATCCGCGTATCCATTTCGGCTC
GGTTGGGCGATAG

Upstream 100 bases:

>100_bases
TTGCCGTACTACTACTCGGCCGAAGCCTGGGTGCTGACGGCTTGGTGGCGGACGCCGGACTCCGCCCAATCGGCTGCCAA
ATGACCGCATCGGTGACACC

Downstream 100 bases:

>100_bases
GCGGGCCGGCGACCATGACCCAGTATTCGCGCACTTCAACGCATGCACCCAACACGGCAGCGCCACATCCGGTGCGCCAC
TCGCCGTCGCCGCTCAAGCG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MFAYLIKRLLLLIPTLIGVVTLTFVVIQFVPGGPIEQMMMEMKGRGGGGEASGGGAFDYRGRRGVDAEKIKEIRALYGFD
KSPVERYFLMLGRFARFDLGESYFQHRSVWDLIKSKLPVSISIGLWTFFLTYLIAVPLGIAKAVRAGSRFDLVTSIIVLV
GYAIPGFVLGVLLLVLFGGGTFFQWFPIRGITSDNWDQLSLLGKITDYLWHITLPVMASVVGSFAVITMLTKNAFLEEIR
KQYVLTARSKGLSERRVLWKHIFRNALLPLVTGFPSAFIGAFFTGSLLIEQLFSLDGMGLLSYEAVMRRDYPVVLGTLYL
FTLIGLAARLISDVCYVLVDPRIHFGSVGR

Sequences:

>Translated_350_residues
MFAYLIKRLLLLIPTLIGVVTLTFVVIQFVPGGPIEQMMMEMKGRGGGGEASGGGAFDYRGRRGVDAEKIKEIRALYGFD
KSPVERYFLMLGRFARFDLGESYFQHRSVWDLIKSKLPVSISIGLWTFFLTYLIAVPLGIAKAVRAGSRFDLVTSIIVLV
GYAIPGFVLGVLLLVLFGGGTFFQWFPIRGITSDNWDQLSLLGKITDYLWHITLPVMASVVGSFAVITMLTKNAFLEEIR
KQYVLTARSKGLSERRVLWKHIFRNALLPLVTGFPSAFIGAFFTGSLLIEQLFSLDGMGLLSYEAVMRRDYPVVLGTLYL
FTLIGLAARLISDVCYVLVDPRIHFGSVGR
>Mature_350_residues
MFAYLIKRLLLLIPTLIGVVTLTFVVIQFVPGGPIEQMMMEMKGRGGGGEASGGGAFDYRGRRGVDAEKIKEIRALYGFD
KSPVERYFLMLGRFARFDLGESYFQHRSVWDLIKSKLPVSISIGLWTFFLTYLIAVPLGIAKAVRAGSRFDLVTSIIVLV
GYAIPGFVLGVLLLVLFGGGTFFQWFPIRGITSDNWDQLSLLGKITDYLWHITLPVMASVVGSFAVITMLTKNAFLEEIR
KQYVLTARSKGLSERRVLWKHIFRNALLPLVTGFPSAFIGAFFTGSLLIEQLFSLDGMGLLSYEAVMRRDYPVVLGTLYL
FTLIGLAARLISDVCYVLVDPRIHFGSVGR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=361, Percent_Identity=55.4016620498615, Blast_Score=404, Evalue=1e-114,
Organism=Escherichia coli, GI1789965, Length=359, Percent_Identity=29.8050139275766, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1787497, Length=346, Percent_Identity=28.6127167630058, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787053, Length=345, Percent_Identity=29.5652173913043, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1789888, Length=345, Percent_Identity=26.6666666666667, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787761, Length=357, Percent_Identity=25.4901960784314, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=22.6765799256506, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38995; Mature: 38995

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAYLIKRLLLLIPTLIGVVTLTFVVIQFVPGGPIEQMMMEMKGRGGGGEASGGGAFDYR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GRRGVDAEKIKEIRALYGFDKSPVERYFLMLGRFARFDLGESYFQHRSVWDLIKSKLPVS
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ISIGLWTFFLTYLIAVPLGIAKAVRAGSRFDLVTSIIVLVGYAIPGFVLGVLLLVLFGGG
EEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TFFQWFPIRGITSDNWDQLSLLGKITDYLWHITLPVMASVVGSFAVITMLTKNAFLEEIR
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQYVLTARSKGLSERRVLWKHIFRNALLPLVTGFPSAFIGAFFTGSLLIEQLFSLDGMGL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
LSYEAVMRRDYPVVLGTLYLFTLIGLAARLISDVCYVLVDPRIHFGSVGR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFAYLIKRLLLLIPTLIGVVTLTFVVIQFVPGGPIEQMMMEMKGRGGGGEASGGGAFDYR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GRRGVDAEKIKEIRALYGFDKSPVERYFLMLGRFARFDLGESYFQHRSVWDLIKSKLPVS
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
ISIGLWTFFLTYLIAVPLGIAKAVRAGSRFDLVTSIIVLVGYAIPGFVLGVLLLVLFGGG
EEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TFFQWFPIRGITSDNWDQLSLLGKITDYLWHITLPVMASVVGSFAVITMLTKNAFLEEIR
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQYVLTARSKGLSERRVLWKHIFRNALLPLVTGFPSAFIGAFFTGSLLIEQLFSLDGMGL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
LSYEAVMRRDYPVVLGTLYLFTLIGLAARLISDVCYVLVDPRIHFGSVGR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]