| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is pyrG [H]
Identifier: 187928062
GI number: 187928062
Start: 1027190
End: 1028851
Strand: Direct
Name: pyrG [H]
Synonym: Rpic_0969
Alternate gene names: 187928062
Gene position: 1027190-1028851 (Clockwise)
Preceding gene: 187928061
Following gene: 187928063
Centisome position: 26.05
GC content: 61.97
Gene sequence:
>1662_bases ATGACCAAGTTCGTATTCGTTACCGGTGGCGTAGTGTCCTCACTCGGCAAGGGCATCGCCGCCGCCTCGCTCGCGGCCAT TCTTGAGTCGCGCGGTCTCAAAGTCACCCTCCTCAAACTCGATCCCTACATCAACGTCGACCCGGGCACCATGAGCCCGT TCCAGCACGGCGAAGTGTTTGTGACCGAGGACGGCGCAGAAACCGACCTCGATCTTGGCCACTACGAGCGTTTCGTCTCG GCCAAGATGCGCAAGGCGAACAACTTCACCACCGGCCAGATCTACGAATCCGTGATCCGCAAGGAGCGTCGCGGCGAGTA TCTCGGCAAGACGGTGCAAGTCATTCCCCATATCACCAACGAAATCCAGGCGTTCATCGAGCGCGGTGCTGCGGCATCGC ACGACGGTAAGGCCGATGTGGCAATCGTGGAAATCGGCGGTACGGTGGGCGATATCGAATCGCTGCCGTTCCTCGAGGCC GCACGCCAGATGAGCCTGCGCCTGGGTCGCAACCAGGTGGCGTTCGCGCATCTGACGCTGGTGCCGTTCATCGCCAGCGC CGGCGAACTGAAGACCAAGCCGACCCAGCATTCGGTGCAGAAGCTGCGCGAAATCGGTGTCCAGCCGACCGCGCTGCTGT GCCGCGCTGACCGCCCGATTCCCGACGATGAGCGTGCGAAGATTTCGCTCTTCGCCAACATGCCGCAGGACGCGGTGATC TCGGTGTGGGATGTCGACACCATTTACAAGATCCCGCAGATGCTCAACGAGCAGGGGCTGGATCGCATCATTTGCGAAGA GCTGCGCATCGAAGCTCCGCCGGCGGACCTGTCGGTGTGGGCGCATATGGTGCACACGCTGGAAAACCCGCAGCACGAGA TCACCATCGGCATGGTCGGCAAGTACGTTGACCTGACCGAGTCGTACAAGTCGCTGATCGAAGCGCTGCGCCACGCCGGC CTGCACACTTCGACGCGCGTCAATATCGAGTACATCGATTCCGAAGAACTGGAATCGGGCCATACGCAGGTGCTGGATAC GCTGGATGCGATTCTGGTGCCGGGCGGCTTTGGCAAGCGTGGTACGGAAGGCAAGATTCGCGCAATCCAATACGCTCGTG AAAAGGGTGTGCCGTACCTGGGCATCTGCCTGGGGATGCAGTTGGCCGTGATCGAGTTTGCACGCCATCTGGCCGGCATG AAGGACGCCAACAGCACGGAATTCAACGACGAGACCGAGCATCCGGTGGTCGCGCTCATCACCGAATGGCTGGATCGCGA TGGCCGCGTCGAAAAGCGCTCGGCCGACTCCGACCTGGGCGGCACCATGCGCCTGGGCTCGCAGCGCGTGCCGGTGCAAT CGGGTACCAAGGCAGCGGCGATCTACGGCGCGGAAGTCAACGAACGCCATCGTCACCGCTACGAGGTGAACAACCACTAC GTGCCGCAGCTTGAAAAGGCCGGGATGATCATCTCCGCGCGTACGCCGTCGGAAAACCTGCCGGAAATGATGGAACTGCC GGCGTCGATGCACCCGTGGTTCGTCGGCGTGCAGTTCCACCCGGAATTCACCTCGACGCCGCGTGACGGCCACCCGCTGT TCAAAGCCTACGTGGAAGCCGCGCTGGCACATCAGCAGAACACGCAACGCGCTGCCGCCTGA
Upstream 100 bases:
>100_bases GCCGCATAGGCAAGACCGCGCTGGGGCAAATTCCACCGTTCTGTCACGGATCGGAGAGGGGACCTTTGCTATAATCCGGC TTTCCCCGGCAAGCTAGGTC
Downstream 100 bases:
>100_bases GCGCCGGCACACGGGAACATCATGAAACTCTGCGATTTCGAAGTCGGCCTCGACAAACCGTTCTTCCTGATTGCCGGCAC CTGCGTGATCGAATCCGAGC
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVS AKMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITNEIQAFIERGAAASHDGKADVAIVEIGGTVGDIESLPFLEA ARQMSLRLGRNQVAFAHLTLVPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVI SVWDVDTIYKIPQMLNEQGLDRIICEELRIEAPPADLSVWAHMVHTLENPQHEITIGMVGKYVDLTESYKSLIEALRHAG LHTSTRVNIEYIDSEELESGHTQVLDTLDAILVPGGFGKRGTEGKIRAIQYAREKGVPYLGICLGMQLAVIEFARHLAGM KDANSTEFNDETEHPVVALITEWLDRDGRVEKRSADSDLGGTMRLGSQRVPVQSGTKAAAIYGAEVNERHRHRYEVNNHY VPQLEKAGMIISARTPSENLPEMMELPASMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEAALAHQQNTQRAAA
Sequences:
>Translated_553_residues MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVS AKMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITNEIQAFIERGAAASHDGKADVAIVEIGGTVGDIESLPFLEA ARQMSLRLGRNQVAFAHLTLVPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVI SVWDVDTIYKIPQMLNEQGLDRIICEELRIEAPPADLSVWAHMVHTLENPQHEITIGMVGKYVDLTESYKSLIEALRHAG LHTSTRVNIEYIDSEELESGHTQVLDTLDAILVPGGFGKRGTEGKIRAIQYAREKGVPYLGICLGMQLAVIEFARHLAGM KDANSTEFNDETEHPVVALITEWLDRDGRVEKRSADSDLGGTMRLGSQRVPVQSGTKAAAIYGAEVNERHRHRYEVNNHY VPQLEKAGMIISARTPSENLPEMMELPASMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEAALAHQQNTQRAAA >Mature_552_residues TKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFVSA KMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITNEIQAFIERGAAASHDGKADVAIVEIGGTVGDIESLPFLEAA RQMSLRLGRNQVAFAHLTLVPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVIS VWDVDTIYKIPQMLNEQGLDRIICEELRIEAPPADLSVWAHMVHTLENPQHEITIGMVGKYVDLTESYKSLIEALRHAGL HTSTRVNIEYIDSEELESGHTQVLDTLDAILVPGGFGKRGTEGKIRAIQYAREKGVPYLGICLGMQLAVIEFARHLAGMK DANSTEFNDETEHPVVALITEWLDRDGRVEKRSADSDLGGTMRLGSQRVPVQSGTKAAAIYGAEVNERHRHRYEVNNHYV PQLEKAGMIISARTPSENLPEMMELPASMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEAALAHQQNTQRAAA
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=561, Percent_Identity=44.7415329768271, Blast_Score=473, Evalue=1e-133, Organism=Homo sapiens, GI28559085, Length=561, Percent_Identity=44.0285204991087, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI28559083, Length=561, Percent_Identity=44.0285204991087, Blast_Score=469, Evalue=1e-132, Organism=Homo sapiens, GI221316689, Length=561, Percent_Identity=44.0285204991087, Blast_Score=469, Evalue=1e-132, Organism=Escherichia coli, GI1789142, Length=546, Percent_Identity=61.3553113553114, Blast_Score=684, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=611, Percent_Identity=38.7888707037643, Blast_Score=416, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6322563, Length=575, Percent_Identity=41.7391304347826, Blast_Score=440, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6319432, Length=577, Percent_Identity=41.2478336221837, Blast_Score=439, Evalue=1e-124, Organism=Drosophila melanogaster, GI24664469, Length=572, Percent_Identity=44.7552447552448, Blast_Score=468, Evalue=1e-132, Organism=Drosophila melanogaster, GI21357815, Length=517, Percent_Identity=43.5203094777563, Blast_Score=395, Evalue=1e-110,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 61035; Mature: 60904
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CCEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFVSAKMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQAFIERGAAASHDGKADVAIVEIGGTVGDIESLPFLEAARQMSLRLGRNQVAFAHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHH VPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVI HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEE SVWDVDTIYKIPQMLNEQGLDRIICEELRIEAPPADLSVWAHMVHTLENPQHEITIGMVG EEECHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC KYVDLTESYKSLIEALRHAGLHTSTRVNIEYIDSEELESGHTQVLDTLDAILVPGGFGKR CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHEECCCCCCC GTEGKIRAIQYAREKGVPYLGICLGMQLAVIEFARHLAGMKDANSTEFNDETEHPVVALI CCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH TEWLDRDGRVEKRSADSDLGGTMRLGSQRVPVQSGTKAAAIYGAEVNERHRHRYEVNNHY HHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCC VPQLEKAGMIISARTPSENLPEMMELPASMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEA CCCHHHCCEEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALAHQQNTQRAAA HHHHHHCHHHCCC >Mature Secondary Structure TKFVFVTGGVVSSLGKGIAAASLAAILESRGLKVTLLKLDPYINVDPGTMSPFQHGEVF CEEEEEECHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTEDGAETDLDLGHYERFVSAKMRKANNFTTGQIYESVIRKERRGEYLGKTVQVIPHITN EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQAFIERGAAASHDGKADVAIVEIGGTVGDIESLPFLEAARQMSLRLGRNQVAFAHLTL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHH VPFIASAGELKTKPTQHSVQKLREIGVQPTALLCRADRPIPDDERAKISLFANMPQDAVI HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCEE SVWDVDTIYKIPQMLNEQGLDRIICEELRIEAPPADLSVWAHMVHTLENPQHEITIGMVG EEECHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC KYVDLTESYKSLIEALRHAGLHTSTRVNIEYIDSEELESGHTQVLDTLDAILVPGGFGKR CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHEECCCCCCC GTEGKIRAIQYAREKGVPYLGICLGMQLAVIEFARHLAGMKDANSTEFNDETEHPVVALI CCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH TEWLDRDGRVEKRSADSDLGGTMRLGSQRVPVQSGTKAAAIYGAEVNERHRHRYEVNNHY HHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCC VPQLEKAGMIISARTPSENLPEMMELPASMHPWFVGVQFHPEFTSTPRDGHPLFKAYVEA CCCHHHCCEEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH ALAHQQNTQRAAA HHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]