| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187928048
Identifier: 187928048
GI number: 187928048
Start: 1011826
End: 1012593
Strand: Direct
Name: 187928048
Synonym: Rpic_0955
Alternate gene names: NA
Gene position: 1011826-1012593 (Clockwise)
Preceding gene: 187928047
Following gene: 187928053
Centisome position: 25.66
GC content: 61.59
Gene sequence:
>768_bases ATGGAGTCCGGGGTCTTAGACAAAGGGGCGATCATGCAAGCGCATCCCGTAGTTTCCAGAGACGAATGGCTCATCAAACG CAGGGCGCTGCTGGCTCGCGAGAAGGAGGCCATCCATCTGCGCGACGCCATCAACGCCGAGCGCCAGGCGCTGCCGTGGG TCAAGGTCGATACGGAATACGAATTTGACTCGCCGGAAGGCAAGAAGACGCTGGCCGAGCTGTTTGACGGCCGCAGCCAG TTGATGGTCTACCACTTCATGCTCGGCCCCGACTGGGGCGCGGGCTGTCCCGGGTGCTCCTTCCTGTCCGACCATATTGG CGGAATGCTCACGCATCTGAACCACCATGACGTGACGTTCGTCGCCGTATCTCGCGCGCCGATCGACAAAATCGCGGCCT ACAAGAAGCGCATGGGCTGGCAATTCCCGTGGGTGTCGTCGTTCGGTACGGCGTTCAACCACGACTACCGGGTGAGCTTC TCGCAAGACGAACTCGCAAGCGGCTCGGTCGACTACAACTACACGGCAACGCCCCGTGAAGACGCCCACGACGAGTTGCC CGGAATGAGCGCGTTTTACAAGGACGAGGCGGGCAATGTCTTCCACACGTACTCGACGTATGCGCGCGGCTTGGAAGACA TGCTAGGGACACTGCTGCTACTTGACCGTGCGCCGCTCGGCCGCAACGAGACCGGCCCCATGTCATGGGTGCGCCGTCAC GATGAATACGAAGACGCGCCGAAGGCGCACGCATGCTGCGCGACGTAA
Upstream 100 bases:
>100_bases GACATGCGCAGAGGCGGCTGATTCTCTTCCATGGCGCGCAAGTCGCATCCGGTTGGCGACTTGTGCGCCGCGGCTTTTCA TTCGCGTGACGCCGCCTAGT
Downstream 100 bases:
>100_bases CACGCTGGAGCGGAAGAGGGGAAGAGCAAAGAGGGGATTGGTGCCCGGAGCCGGGATCGAACCGGCACGCGCCGATTAGG GCGCAGCGGATTTTAAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MESGVLDKGAIMQAHPVVSRDEWLIKRRALLAREKEAIHLRDAINAERQALPWVKVDTEYEFDSPEGKKTLAELFDGRSQ LMVYHFMLGPDWGAGCPGCSFLSDHIGGMLTHLNHHDVTFVAVSRAPIDKIAAYKKRMGWQFPWVSSFGTAFNHDYRVSF SQDELASGSVDYNYTATPREDAHDELPGMSAFYKDEAGNVFHTYSTYARGLEDMLGTLLLLDRAPLGRNETGPMSWVRRH DEYEDAPKAHACCAT
Sequences:
>Translated_255_residues MESGVLDKGAIMQAHPVVSRDEWLIKRRALLAREKEAIHLRDAINAERQALPWVKVDTEYEFDSPEGKKTLAELFDGRSQ LMVYHFMLGPDWGAGCPGCSFLSDHIGGMLTHLNHHDVTFVAVSRAPIDKIAAYKKRMGWQFPWVSSFGTAFNHDYRVSF SQDELASGSVDYNYTATPREDAHDELPGMSAFYKDEAGNVFHTYSTYARGLEDMLGTLLLLDRAPLGRNETGPMSWVRRH DEYEDAPKAHACCAT >Mature_255_residues MESGVLDKGAIMQAHPVVSRDEWLIKRRALLAREKEAIHLRDAINAERQALPWVKVDTEYEFDSPEGKKTLAELFDGRSQ LMVYHFMLGPDWGAGCPGCSFLSDHIGGMLTHLNHHDVTFVAVSRAPIDKIAAYKKRMGWQFPWVSSFGTAFNHDYRVSF SQDELASGSVDYNYTATPREDAHDELPGMSAFYKDEAGNVFHTYSTYARGLEDMLGTLLLLDRAPLGRNETGPMSWVRRH DEYEDAPKAHACCAT
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28730; Mature: 28730
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESGVLDKGAIMQAHPVVSRDEWLIKRRALLAREKEAIHLRDAINAERQALPWVKVDTEY CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEECCCC EFDSPEGKKTLAELFDGRSQLMVYHFMLGPDWGAGCPGCSFLSDHIGGMLTHLNHHDVTF CCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE VAVSRAPIDKIAAYKKRMGWQFPWVSSFGTAFNHDYRVSFSQDELASGSVDYNYTATPRE EEECCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCC DAHDELPGMSAFYKDEAGNVFHTYSTYARGLEDMLGTLLLLDRAPLGRNETGPMSWVRRH CHHHHCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH DEYEDAPKAHACCAT HHHCCCCCCCCCCCC >Mature Secondary Structure MESGVLDKGAIMQAHPVVSRDEWLIKRRALLAREKEAIHLRDAINAERQALPWVKVDTEY CCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEECCCC EFDSPEGKKTLAELFDGRSQLMVYHFMLGPDWGAGCPGCSFLSDHIGGMLTHLNHHDVTF CCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE VAVSRAPIDKIAAYKKRMGWQFPWVSSFGTAFNHDYRVSFSQDELASGSVDYNYTATPRE EEECCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECHHHHCCCCCCCCCCCCCCC DAHDELPGMSAFYKDEAGNVFHTYSTYARGLEDMLGTLLLLDRAPLGRNETGPMSWVRRH CHHHHCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH DEYEDAPKAHACCAT HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA