| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yeiH [C]
Identifier: 187928047
GI number: 187928047
Start: 1010607
End: 1011710
Strand: Direct
Name: yeiH [C]
Synonym: Rpic_0954
Alternate gene names: 187928047
Gene position: 1010607-1011710 (Clockwise)
Preceding gene: 187928045
Following gene: 187928048
Centisome position: 25.63
GC content: 66.94
Gene sequence:
>1104_bases ATGACGATTGCACAGAAACAGCTGGCACCCCAGAGCATGGCAGCGGGGTTCGATGGGCGAACTCTTGCCGGCGTGGCGGT GCTGTTCGGGTGCGCGGGCGTCGCGGTGGCGCTCGGCGCAATGCCGTGGGCTGGGCATCTGGGCTTAAGCGCATTGACGC TTGCCATCCTGCTCGGCATGGCCGTGGGTCATGTGCCTGGGCACCAGCGTTGGCTGACGCCGGGGGCGATCCAGTTTGCG CGACATACTTTGCTGCGTGCCGGCGTGATTCTCTACGGCGCGCGGCTGACGCTGGCGCAGATCCAGGATCTCGGGACTTC GGGCGTGGTGATTCCGCTGATGGTATTGGCCGCGACGACACTGGCCGGTACGTGGATCGGCACGCGTTGGTTTCGCCTGA CGCGCTCGCAAGCCGTCCTGGTGGCGGCCGGGAGTGCGGTGTGTGGGGCGGCGGCCGTGCTGGCCGTTGCGCCAGCGGTA AAGGCGTCCCCGCGCGAAACCGCCGTGGCAATCGCCAGCGTGGTGCTGTTCGGCACGATCGGCATTTTTCTGTATCCGTG GCTGTACGCGCTTGTTGCGCATGCCGGTGTGGCCATCGCGCCGGAGCACTTTGGCGTCTACATCGGCTCGACGGTGCACG AGGTCGCGCAGGTGATTGCCGCAGCGCGTCCGTTGGGCGACGACGCCACCAACGCCGCCGTCGTCAGCAAGATGGTGCGT GTGCTGGCGCTGGCTCCGTTGCTCGTGGTACTGGCGTGCACAACGCCCGCTGAAGGTCAGGCTTGCGCTTCGGCGTCTCC CGAGAATGCGCTTCGCAAAGCCGCCGGCCATGCCTGGAAGGCGATGCCCTGGTTTGCGGTGGGCCTGCTGATCGTGACGC TGCTGAATTCCGCTGGTGCGATCCCAGCCGCATGGCATGCCCCCATCGACGCCATCGACACCGCCATGCTGGCCTGCGCG ATGTTTGCCATCGGCACGCAAACGCATGTGCCGATGCTGCTGAAGTCCGGCGTGCGACCGCTGCTGTGTGCCGCTGTGCT GTGGGTAGGTCTGGTGGGCGGCGGCGCGCTCATCAATGTGGGCGTGCGCTGGCTGGTGGGCTGA
Upstream 100 bases:
>100_bases TTATTCATAAAAGTGGTTGAAATTACAAAAATTACCTGTTTTACATGTTATCACGGACTGCATATCGTTATGCGCATAGT GAATAAGCAAGGCAAATGTG
Downstream 100 bases:
>100_bases TCCGGCACCTGAAATGACATGCGCAGAGGCGGCTGATTCTCTTCCATGGCGCGCAAGTCGCATCCGGTTGGCGACTTGTG CGCCGCGGCTTTTCATTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTIAQKQLAPQSMAAGFDGRTLAGVAVLFGCAGVAVALGAMPWAGHLGLSALTLAILLGMAVGHVPGHQRWLTPGAIQFA RHTLLRAGVILYGARLTLAQIQDLGTSGVVIPLMVLAATTLAGTWIGTRWFRLTRSQAVLVAAGSAVCGAAAVLAVAPAV KASPRETAVAIASVVLFGTIGIFLYPWLYALVAHAGVAIAPEHFGVYIGSTVHEVAQVIAAARPLGDDATNAAVVSKMVR VLALAPLLVVLACTTPAEGQACASASPENALRKAAGHAWKAMPWFAVGLLIVTLLNSAGAIPAAWHAPIDAIDTAMLACA MFAIGTQTHVPMLLKSGVRPLLCAAVLWVGLVGGGALINVGVRWLVG
Sequences:
>Translated_367_residues MTIAQKQLAPQSMAAGFDGRTLAGVAVLFGCAGVAVALGAMPWAGHLGLSALTLAILLGMAVGHVPGHQRWLTPGAIQFA RHTLLRAGVILYGARLTLAQIQDLGTSGVVIPLMVLAATTLAGTWIGTRWFRLTRSQAVLVAAGSAVCGAAAVLAVAPAV KASPRETAVAIASVVLFGTIGIFLYPWLYALVAHAGVAIAPEHFGVYIGSTVHEVAQVIAAARPLGDDATNAAVVSKMVR VLALAPLLVVLACTTPAEGQACASASPENALRKAAGHAWKAMPWFAVGLLIVTLLNSAGAIPAAWHAPIDAIDTAMLACA MFAIGTQTHVPMLLKSGVRPLLCAAVLWVGLVGGGALINVGVRWLVG >Mature_366_residues TIAQKQLAPQSMAAGFDGRTLAGVAVLFGCAGVAVALGAMPWAGHLGLSALTLAILLGMAVGHVPGHQRWLTPGAIQFAR HTLLRAGVILYGARLTLAQIQDLGTSGVVIPLMVLAATTLAGTWIGTRWFRLTRSQAVLVAAGSAVCGAAAVLAVAPAVK ASPRETAVAIASVVLFGTIGIFLYPWLYALVAHAGVAIAPEHFGVYIGSTVHEVAQVIAAARPLGDDATNAAVVSKMVRV LALAPLLVVLACTTPAEGQACASASPENALRKAAGHAWKAMPWFAVGLLIVTLLNSAGAIPAAWHAPIDAIDTAMLACAM FAIGTQTHVPMLLKSGVRPLLCAAVLWVGLVGGGALINVGVRWLVG
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=332, Percent_Identity=44.578313253012, Blast_Score=239, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004630 - InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 37383; Mature: 37252
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIAQKQLAPQSMAAGFDGRTLAGVAVLFGCAGVAVALGAMPWAGHLGLSALTLAILLGM CCCCHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AVGHVPGHQRWLTPGAIQFARHTLLRAGVILYGARLTLAQIQDLGTSGVVIPLMVLAATT HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LAGTWIGTRWFRLTRSQAVLVAAGSAVCGAAAVLAVAPAVKASPRETAVAIASVVLFGTI HHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GIFLYPWLYALVAHAGVAIAPEHFGVYIGSTVHEVAQVIAAARPLGDDATNAAVVSKMVR HHHHHHHHHHHHHHCCCEECHHHHHHEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VLALAPLLVVLACTTPAEGQACASASPENALRKAAGHAWKAMPWFAVGLLIVTLLNSAGA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC IPAAWHAPIDAIDTAMLACAMFAIGTQTHVPMLLKSGVRPLLCAAVLWVGLVGGGALINV CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH GVRWLVG HHHHHCC >Mature Secondary Structure TIAQKQLAPQSMAAGFDGRTLAGVAVLFGCAGVAVALGAMPWAGHLGLSALTLAILLGM CCCHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AVGHVPGHQRWLTPGAIQFARHTLLRAGVILYGARLTLAQIQDLGTSGVVIPLMVLAATT HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LAGTWIGTRWFRLTRSQAVLVAAGSAVCGAAAVLAVAPAVKASPRETAVAIASVVLFGTI HHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GIFLYPWLYALVAHAGVAIAPEHFGVYIGSTVHEVAQVIAAARPLGDDATNAAVVSKMVR HHHHHHHHHHHHHHCCCEECHHHHHHEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VLALAPLLVVLACTTPAEGQACASASPENALRKAAGHAWKAMPWFAVGLLIVTLLNSAGA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC IPAAWHAPIDAIDTAMLACAMFAIGTQTHVPMLLKSGVRPLLCAAVLWVGLVGGGALINV CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH GVRWLVG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]