Click here to switch to the map view.

The map label for this gene is 187928039

Identifier: 187928039

GI number: 187928039

Start: 999779

End: 1000030

Strand: Direct

Name: 187928039

Synonym: Rpic_0944

Alternate gene names: NA

Gene position: 999779-1000030 (Clockwise)

Preceding gene: 187928038

Following gene: 187928041

Centisome position: 25.36

GC content: 65.87

Gene sequence:

>252_bases
ATGCAATTGCTCTGTATCACCATCCTCATCGGCTTTCTGGCCGGGCTTGTGGCCCGATGGGTGACGCCGCGCTGCGGCGC
AAGCGGCTTCGTCCTCACCATCATGGTCGGCATTGCCGGTGCGCTGGCCGCGGCCTTTCTCGGCCAGTTGCTGCATTGGT
ATGAGCCCGGCCAATTGGCGGGGTTTGCCGGCGCGGTCGTGGGCGCCGTCATCCTGCTGGCCGGCTATCACGTGCTGGCA
CGCGAACGCTGA

Upstream 100 bases:

>100_bases
TCTGCGGCTGCGCGCCATCTACGGGCAGGGTTTCTGCCTGGAGCGCGTGATCGACGCCGAAGCAACGCACTGACAGCCTT
GACCCGCCGGAGCCGCTGCC

Downstream 100 bases:

>100_bases
GTCGGTCGCTTCAACGTAAAGCCCTGCAAGACGGGGTTTTTTTGTTGGTGAAGCAGGGGAGGGGATTCGAGCGCCCACCA
CTAAAAGAAACGCCCTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MQLLCITILIGFLAGLVARWVTPRCGASGFVLTIMVGIAGALAAAFLGQLLHWYEPGQLAGFAGAVVGAVILLAGYHVLA
RER

Sequences:

>Translated_83_residues
MQLLCITILIGFLAGLVARWVTPRCGASGFVLTIMVGIAGALAAAFLGQLLHWYEPGQLAGFAGAVVGAVILLAGYHVLA
RER
>Mature_83_residues
MQLLCITILIGFLAGLVARWVTPRCGASGFVLTIMVGIAGALAAAFLGQLLHWYEPGQLAGFAGAVVGAVILLAGYHVLA
RER

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8637; Mature: 8637

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLCITILIGFLAGLVARWVTPRCGASGFVLTIMVGIAGALAAAFLGQLLHWYEPGQLA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
GFAGAVVGAVILLAGYHVLARER
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLLCITILIGFLAGLVARWVTPRCGASGFVLTIMVGIAGALAAAFLGQLLHWYEPGQLA
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
GFAGAVVGAVILLAGYHVLARER
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA