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The map label for this gene is rsmI [H]

Identifier: 187928005

GI number: 187928005

Start: 965626

End: 966357

Strand: Reverse

Name: rsmI [H]

Synonym: Rpic_0910

Alternate gene names: 187928005

Gene position: 966357-965626 (Counterclockwise)

Preceding gene: 187928006

Following gene: 187928000

Centisome position: 24.51

GC content: 63.39

Gene sequence:

>732_bases
ATGGCCGGTACGCTTTATCTCATTCCGAATACGCTGGGCTCGCGCGATGCGGCCGACCCGCTGCCTGACGTAATTCCTGC
CGGCGTGCAGCAGATCACTGCGCGACTCGATTACTTTGTCGCCGAGCACGCCAAGACCGCACGCGCGTTGCTGAAAAAGC
TGGCCGAGACCACGCCGCTGGCGCATCCACTGCAGGAAATCACCATCCGCGAGCTGAACGTCAAAACGCCGGAATCGGAA
CTGGAAGCGCTGCTGGCGCCAGTGCTTGCCGGCCAGGACGCGGGACTGATGTCGGAAGCCGGGGTGCCGGCGGTGGCCGA
TCCGGGCGCAAATCTCGTGCGTCTCGCGCACCGACGTGGCGTGCGCGTAAAGCCGCTGGTGGGACCGAGTTCGATTCTGC
TGGCGGTGATGGCATCCGGCTTGAACGGCCAGAGCTTTGCATTCAACGGCTATCTGCCGGTCGATGCGGCCGAGCGCAAG
ACAAAGCTGCGCACACTGGAACAGCTTTCACGCTCAGTCGCCCAAACGCAGGTATTCATTGAAACGCCCTACCGCAATGG
CGCGTTGCTCGAAGCCATTCAGGCCGGCTGCGCGCCGAGTACGCTGCTGTCGATTGCAGTGGACCTGACACTGCCCAGCG
AGCAGGTTGTCACGTTGCCCGTGAGCGACTGGCGCGCCGACCGCATGAACCTGCACAAGCGGCCGGCGATTTTCTCGCTG
CTAGCGCGATAG

Upstream 100 bases:

>100_bases
ACGCGTGGAGTCGTCGGACCCGACCGCGCTGGTGGGTCTGCCGCTGATCGCGCTGACCAGCATGCTGCGCAACGTTCACT
ACCCCCTCTTCGCCTGAACC

Downstream 100 bases:

>100_bases
CGCGCCTCCGCCCCTTCTACTCCTTCATCAGCAGCTTGAGCTGGCCCGTAGTGGCCAGCGCCTTGACTGCGCCCGCGCCC
ATCGCCGTGCCGAGCTTGCG

Product: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAGTLYLIPNTLGSRDAADPLPDVIPAGVQQITARLDYFVAEHAKTARALLKKLAETTPLAHPLQEITIRELNVKTPESE
LEALLAPVLAGQDAGLMSEAGVPAVADPGANLVRLAHRRGVRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAAERK
TKLRTLEQLSRSVAQTQVFIETPYRNGALLEAIQAGCAPSTLLSIAVDLTLPSEQVVTLPVSDWRADRMNLHKRPAIFSL
LAR

Sequences:

>Translated_243_residues
MAGTLYLIPNTLGSRDAADPLPDVIPAGVQQITARLDYFVAEHAKTARALLKKLAETTPLAHPLQEITIRELNVKTPESE
LEALLAPVLAGQDAGLMSEAGVPAVADPGANLVRLAHRRGVRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAAERK
TKLRTLEQLSRSVAQTQVFIETPYRNGALLEAIQAGCAPSTLLSIAVDLTLPSEQVVTLPVSDWRADRMNLHKRPAIFSL
LAR
>Mature_242_residues
AGTLYLIPNTLGSRDAADPLPDVIPAGVQQITARLDYFVAEHAKTARALLKKLAETTPLAHPLQEITIRELNVKTPESEL
EALLAPVLAGQDAGLMSEAGVPAVADPGANLVRLAHRRGVRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAAERKT
KLRTLEQLSRSVAQTQVFIETPYRNGALLEAIQAGCAPSTLLSIAVDLTLPSEQVVTLPVSDWRADRMNLHKRPAIFSLL
AR

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=234, Percent_Identity=29.0598290598291, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25991; Mature: 25860

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTLYLIPNTLGSRDAADPLPDVIPAGVQQITARLDYFVAEHAKTARALLKKLAETTPL
CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AHPLQEITIRELNVKTPESELEALLAPVLAGQDAGLMSEAGVPAVADPGANLVRLAHRRG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCC
VRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAAERKTKLRTLEQLSRSVAQTQVFI
CEEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEE
ETPYRNGALLEAIQAGCAPSTLLSIAVDLTLPSEQVVTLPVSDWRADRMNLHKRPAIFSL
ECCCCCCHHHHHHHHCCCHHHHHHHHEEEECCCCCEEEEECCCCCHHHHCCCCCHHHHHH
LAR
HCC
>Mature Secondary Structure 
AGTLYLIPNTLGSRDAADPLPDVIPAGVQQITARLDYFVAEHAKTARALLKKLAETTPL
CCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AHPLQEITIRELNVKTPESELEALLAPVLAGQDAGLMSEAGVPAVADPGANLVRLAHRRG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCC
VRVKPLVGPSSILLAVMASGLNGQSFAFNGYLPVDAAERKTKLRTLEQLSRSVAQTQVFI
CEEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEE
ETPYRNGALLEAIQAGCAPSTLLSIAVDLTLPSEQVVTLPVSDWRADRMNLHKRPAIFSL
ECCCCCCHHHHHHHHCCCHHHHHHHHEEEECCCCCEEEEECCCCCHHHHCCCCCHHHHHH
LAR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]