| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is yceF [C]
Identifier: 187928006
GI number: 187928006
Start: 966361
End: 966957
Strand: Reverse
Name: yceF [C]
Synonym: Rpic_0911
Alternate gene names: 187928006
Gene position: 966957-966361 (Counterclockwise)
Preceding gene: 187928029
Following gene: 187928005
Centisome position: 24.53
GC content: 65.49
Gene sequence:
>597_bases ATGACTTCTGCATCGCGTCCGCCACTGATTCTTGCCTCCAGCTCGCCATATCGGCGGGAATTGCTGGAACGCCTGCGCCT GCCGTTTGAGATCGTGGTACCGGACATTGACGAGACCCCCGCCCCGGACGAGTCGCCCGACCAGACCGCTCTGCGCCTGG CTCGGCAGAAGGCAGAGAAGGTCGCAGCAGGCCATCCCGGCGCGCTGGTGATCGGCTCCGATCAGGTCGCCACACTGGAC GGCAAGCAGGTCGGCAAACCGGGCGACCACCCCCGCGCACTGGCGCAACTGCACTGGATGCGTGGACGCACCGTCACATT TCACTCCGCGCTGTGCCTGTACGACGGCCGGACAGGGCGACACCAGAGCGAGGACATCCGCACGCTGGCCACCTTCCGCG ACCTTTCCGATGAAGAATTGGACGCCTATCTGCATCTGGAACACCCGTACGACGTTGCCGGGAGCGCCAAATCGGAAGGC CTGGGCATCGCCCTGCTCGAACGCGTGGAGTCGTCGGACCCGACCGCGCTGGTGGGTCTGCCGCTGATCGCGCTGACCAG CATGCTGCGCAACGTTCACTACCCCCTCTTCGCCTGA
Upstream 100 bases:
>100_bases CGACACTGCGCGGCCAAACCGCGAAACGCGGGATTATAGCGGGCAGAAACCTGTGGCGTCAAAAGGTTTTGCTCAAAATC CACTGCATCTTCAAGCACTT
Downstream 100 bases:
>100_bases ACCATGGCCGGTACGCTTTATCTCATTCCGAATACGCTGGGCTCGCGCGATGCGGCCGACCCGCTGCCTGACGTAATTCC TGCCGGCGTGCAGCAGATCA
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTSASRPPLILASSSPYRRELLERLRLPFEIVVPDIDETPAPDESPDQTALRLARQKAEKVAAGHPGALVIGSDQVATLD GKQVGKPGDHPRALAQLHWMRGRTVTFHSALCLYDGRTGRHQSEDIRTLATFRDLSDEELDAYLHLEHPYDVAGSAKSEG LGIALLERVESSDPTALVGLPLIALTSMLRNVHYPLFA
Sequences:
>Translated_198_residues MTSASRPPLILASSSPYRRELLERLRLPFEIVVPDIDETPAPDESPDQTALRLARQKAEKVAAGHPGALVIGSDQVATLD GKQVGKPGDHPRALAQLHWMRGRTVTFHSALCLYDGRTGRHQSEDIRTLATFRDLSDEELDAYLHLEHPYDVAGSAKSEG LGIALLERVESSDPTALVGLPLIALTSMLRNVHYPLFA >Mature_197_residues TSASRPPLILASSSPYRRELLERLRLPFEIVVPDIDETPAPDESPDQTALRLARQKAEKVAAGHPGALVIGSDQVATLDG KQVGKPGDHPRALAQLHWMRGRTVTFHSALCLYDGRTGRHQSEDIRTLATFRDLSDEELDAYLHLEHPYDVAGSAKSEGL GIALLERVESSDPTALVGLPLIALTSMLRNVHYPLFA
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=202, Percent_Identity=31.6831683168317, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI87081830, Length=184, Percent_Identity=52.1739130434783, Blast_Score=185, Evalue=2e-48, Organism=Escherichia coli, GI1789646, Length=187, Percent_Identity=36.3636363636364, Blast_Score=99, Evalue=3e-22, Organism=Caenorhabditis elegans, GI193202443, Length=180, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 21676; Mature: 21545
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSASRPPLILASSSPYRRELLERLRLPFEIVVPDIDETPAPDESPDQTALRLARQKAEK CCCCCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH VAAGHPGALVIGSDQVATLDGKQVGKPGDHPRALAQLHWMRGRTVTFHSALCLYDGRTGR HHCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCCC HQSEDIRTLATFRDLSDEELDAYLHLEHPYDVAGSAKSEGLGIALLERVESSDPTALVGL CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEHHH PLIALTSMLRNVHYPLFA HHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSASRPPLILASSSPYRRELLERLRLPFEIVVPDIDETPAPDESPDQTALRLARQKAEK CCCCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH VAAGHPGALVIGSDQVATLDGKQVGKPGDHPRALAQLHWMRGRTVTFHSALCLYDGRTGR HHCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEEEECCCCCC HQSEDIRTLATFRDLSDEELDAYLHLEHPYDVAGSAKSEGLGIALLERVESSDPTALVGL CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEHHH PLIALTSMLRNVHYPLFA HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]