Click here to switch to the map view.

The map label for this gene is 187927993

Identifier: 187927993

GI number: 187927993

Start: 950957

End: 952366

Strand: Direct

Name: 187927993

Synonym: Rpic_0898

Alternate gene names: NA

Gene position: 950957-952366 (Clockwise)

Preceding gene: 187927992

Following gene: 187927994

Centisome position: 24.12

GC content: 61.35

Gene sequence:

>1410_bases
GTGAAACGCCTTTGGCCCCTTGTCTTCCTGTTCGTCTGTGGCCTGGCGCGCGCTGCTGATGTGAGCGGCGCTGAGTTGCA
CTTGTTGTGGGGTGTGCCGTTTGCGGGCATCCTGCTCTCGATTGCCATTGCACCGCTCATGATGCCCAAGCTATGGCACG
ACCATTACGGCAAGATCGCAGCGTCTTGGGCATTGGTGCTTCTGGTGCCGTTCGGGATCGCGTTTGGCTCGCAGGCGGCC
ATCGCTTCCGTCAATCACGCAGCCCTTGCTGAATACATTCCCTTCATCGCGCTGATCGCCGCTTTGTACGTTGTTGCAGG
CGGTATCTGCATTCGCGGCAATCTGCATGGAACGCCAAAGCTCAACACGGGCTTGATCGCGCTTGGTACGGCGCTGGCCA
GCATCATGGGCACGACCGGCGCCGCGATGCTGCTGATCCGGCCTTTGCTGCGCGCCAACGAGGCACGCCCGCATCGGGCG
CACGTTGTCGTGTTCTTCATCTTTCTGGTGGCCAATGCAGGCGGGGCGCTCACGCCGCTGGGCGATCCGCCGCTCTTCCT
CGGCTTCTTGCAGGGCGTGGATTTCTTCTGGACCGCGCAATATCTGTGGCGCCAGACGTTGACGATGTGGGTGCTGCTGC
TGGCGATCTTCTTCGTTATCGACAGCTATTTCTATCACACGGGCAAGGAAGAACTGCCCAACATCACCGACGCCTCGCCG
GATGATGCGGGCCCGCTGCGCTTCGAGGGCAACGTCAACTTTGTGCTGCTGGCGGGCATTCTCGGCCTCGTGCTGATGAG
CGGGCTGTGGAAGCCCGGCATCATCTTCCACGTGATGGGTACCGAGGTGATGCTGCAGAACGTGGTACGCGACGTCGGGC
TGGTCGTCATCGCGCTGCTTTCGTTGTGGCTCACCCCGGCAAGCGCGCGCGCCGGCAACGAGTTCAACTGGGAGCCCATT
CTGGAAGTCGCCAAGCTGTTTGCCGGCATCTTCATCACGATCGGGCCGGTGATTGCCATGCTCAAGGCCGGCGTGGATGG
CCCGTTCGCGGGCATCGTCCATCTCGTCAACGACAGCGCGGGCCAGCCGAACAACGTGATGTACTTCTGGGCGACGGGGG
TGCTGTCGTCGTTTCTCGACAATGCGCCGACGTATCTGGTGTTCTTCAACACCGCCGGTGGCGACGCACGCATGCTGATG
AGCGAGGGCGCCTCCACGCTGGGCGCGATTTCCGCCGCGGCCGTGTTCATGGGTGCCAACACTTATATCGGCAACGCGCC
CAACCTGATGGTCAAGGCCATTGCCGAAAGCCGCGGCCTGCAGATGCCCAGCTTCTTTGGCTACATGCTGTGGTCCGTGT
GCATTCTCTTGCCGATTTTCGTTCTGATGACCTTCGTCTTCTTCCGCTAA

Upstream 100 bases:

>100_bases
GACGTTCAGGGCGACAGACCTCGGGCGTTTACACTGGCGTCTTTGTTCGTGTGGCGAGGCTGCGTTTGCCGTGTGCGCCC
ACGCTTAGGAGAACGCCTAC

Downstream 100 bases:

>100_bases
CCGAACGTGTGCTGAACGTATGAAACCCGGAATCCTTGTCACCCGCGCGATGTTTCCCGAAGTGCTTGAGCGCTTGCGCG
AGACCTTCGACGTGATCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Arsenite-Anitmonite Efflux Pump ArsB Family; Na+ Antiporter; Na+/H+ Antiporter; Transporter Uit6 Family; Signal Peptide; ArsB Family Arsenate Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases; Na+/H+ Antiporter NhaD; Arsenite Transport Protein ArsB; NA+/H+ Antiporter Permease; Na+/H+ Antiporter NhaD-Like Permease; Na+/H+ Antiporter NhaD And Related Arsenite Permeases-Like; Na+/H+ Antiporter NhaD Or Related Arsenite Permease

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MKRLWPLVFLFVCGLARAADVSGAELHLLWGVPFAGILLSIAIAPLMMPKLWHDHYGKIAASWALVLLVPFGIAFGSQAA
IASVNHAALAEYIPFIALIAALYVVAGGICIRGNLHGTPKLNTGLIALGTALASIMGTTGAAMLLIRPLLRANEARPHRA
HVVVFFIFLVANAGGALTPLGDPPLFLGFLQGVDFFWTAQYLWRQTLTMWVLLLAIFFVIDSYFYHTGKEELPNITDASP
DDAGPLRFEGNVNFVLLAGILGLVLMSGLWKPGIIFHVMGTEVMLQNVVRDVGLVVIALLSLWLTPASARAGNEFNWEPI
LEVAKLFAGIFITIGPVIAMLKAGVDGPFAGIVHLVNDSAGQPNNVMYFWATGVLSSFLDNAPTYLVFFNTAGGDARMLM
SEGASTLGAISAAAVFMGANTYIGNAPNLMVKAIAESRGLQMPSFFGYMLWSVCILLPIFVLMTFVFFR

Sequences:

>Translated_469_residues
MKRLWPLVFLFVCGLARAADVSGAELHLLWGVPFAGILLSIAIAPLMMPKLWHDHYGKIAASWALVLLVPFGIAFGSQAA
IASVNHAALAEYIPFIALIAALYVVAGGICIRGNLHGTPKLNTGLIALGTALASIMGTTGAAMLLIRPLLRANEARPHRA
HVVVFFIFLVANAGGALTPLGDPPLFLGFLQGVDFFWTAQYLWRQTLTMWVLLLAIFFVIDSYFYHTGKEELPNITDASP
DDAGPLRFEGNVNFVLLAGILGLVLMSGLWKPGIIFHVMGTEVMLQNVVRDVGLVVIALLSLWLTPASARAGNEFNWEPI
LEVAKLFAGIFITIGPVIAMLKAGVDGPFAGIVHLVNDSAGQPNNVMYFWATGVLSSFLDNAPTYLVFFNTAGGDARMLM
SEGASTLGAISAAAVFMGANTYIGNAPNLMVKAIAESRGLQMPSFFGYMLWSVCILLPIFVLMTFVFFR
>Mature_469_residues
MKRLWPLVFLFVCGLARAADVSGAELHLLWGVPFAGILLSIAIAPLMMPKLWHDHYGKIAASWALVLLVPFGIAFGSQAA
IASVNHAALAEYIPFIALIAALYVVAGGICIRGNLHGTPKLNTGLIALGTALASIMGTTGAAMLLIRPLLRANEARPHRA
HVVVFFIFLVANAGGALTPLGDPPLFLGFLQGVDFFWTAQYLWRQTLTMWVLLLAIFFVIDSYFYHTGKEELPNITDASP
DDAGPLRFEGNVNFVLLAGILGLVLMSGLWKPGIIFHVMGTEVMLQNVVRDVGLVVIALLSLWLTPASARAGNEFNWEPI
LEVAKLFAGIFITIGPVIAMLKAGVDGPFAGIVHLVNDSAGQPNNVMYFWATGVLSSFLDNAPTYLVFFNTAGGDARMLM
SEGASTLGAISAAAVFMGANTYIGNAPNLMVKAIAESRGLQMPSFFGYMLWSVCILLPIFVLMTFVFFR

Specific function: Unknown

COG id: COG1055

COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50475; Mature: 50475

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLWPLVFLFVCGLARAADVSGAELHLLWGVPFAGILLSIAIAPLMMPKLWHDHYGKIA
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASWALVLLVPFGIAFGSQAAIASVNHAALAEYIPFIALIAALYVVAGGICIRGNLHGTPK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
LNTGLIALGTALASIMGTTGAAMLLIRPLLRANEARPHRAHVVVFFIFLVANAGGALTPL
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
GDPPLFLGFLQGVDFFWTAQYLWRQTLTMWVLLLAIFFVIDSYFYHTGKEELPNITDASP
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
DDAGPLRFEGNVNFVLLAGILGLVLMSGLWKPGIIFHVMGTEVMLQNVVRDVGLVVIALL
CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
SLWLTPASARAGNEFNWEPILEVAKLFAGIFITIGPVIAMLKAGVDGPFAGIVHLVNDSA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
GQPNNVMYFWATGVLSSFLDNAPTYLVFFNTAGGDARMLMSEGASTLGAISAAAVFMGAN
CCCCCEEEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCC
TYIGNAPNLMVKAIAESRGLQMPSFFGYMLWSVCILLPIFVLMTFVFFR
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLWPLVFLFVCGLARAADVSGAELHLLWGVPFAGILLSIAIAPLMMPKLWHDHYGKIA
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASWALVLLVPFGIAFGSQAAIASVNHAALAEYIPFIALIAALYVVAGGICIRGNLHGTPK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
LNTGLIALGTALASIMGTTGAAMLLIRPLLRANEARPHRAHVVVFFIFLVANAGGALTPL
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
GDPPLFLGFLQGVDFFWTAQYLWRQTLTMWVLLLAIFFVIDSYFYHTGKEELPNITDASP
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
DDAGPLRFEGNVNFVLLAGILGLVLMSGLWKPGIIFHVMGTEVMLQNVVRDVGLVVIALL
CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
SLWLTPASARAGNEFNWEPILEVAKLFAGIFITIGPVIAMLKAGVDGPFAGIVHLVNDSA
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
GQPNNVMYFWATGVLSSFLDNAPTYLVFFNTAGGDARMLMSEGASTLGAISAAAVFMGAN
CCCCCEEEEEHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHCCC
TYIGNAPNLMVKAIAESRGLQMPSFFGYMLWSVCILLPIFVLMTFVFFR
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA