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The map label for this gene is ycfJ [C]

Identifier: 187927987

GI number: 187927987

Start: 944214

End: 944957

Strand: Reverse

Name: ycfJ [C]

Synonym: Rpic_0892

Alternate gene names: 187927987

Gene position: 944957-944214 (Counterclockwise)

Preceding gene: 187927988

Following gene: 187927977

Centisome position: 23.97

GC content: 66.4

Gene sequence:

>744_bases
ATGAACAACAACGTCCAATCGAACCAAGGTCAACAATACGGCGGCACGTCGCCGGGGCAAGTGCCTCCGTCTTCGCGCCG
CATGCATCCACTGATGACGACGGCCGCTGTGGCCGTGATCATCGCCAGCCTGACGGCGGTGGCCGCCATTACCGGTGTGC
TGCCGACCTCGAAGGCTACACAGGGCAGCACTGACCCCAACGTTGCCGCGCAATCGGCAGCGGCCGTGGCGGGCGCTTCA
GCCCCGATGGCACTGGCTGCGCCAGGCCAGACCACGCAACCGAATCAGGCCGCTCCGTATCCGGCCCAGAATGTGGCGCC
CGCTCTGACGCGAGCCCGCGAGCCGTCGTACGCTGAACGCGCACCCTCGACCAGCCCGAGCTATGCGCAAACCCAGCCGC
GCCAGTCGGCCAGCCCCTATGCCGGCCATGTGACTTCAGTCACGCCGATCACCACGCAAGGCAAGGAAACCGGCCTCGGC
ATGATCGGTGGCGCCGTGGTGGGTGGGCTGCTGGGTAACCAGATTGGCCGCGGCAATGGCCGTACGCTGGCTACGGTCGG
CGGCGCGGTGGCAGGCGGTTATGGCGGCCACGTGGCGGAGAACTACTACAGCCGCGACACCCAATACCGTGTGAACGTGC
GCATGGACAACGGCACCAACCGCAGCTTCACGTACAAGGCTGCACCGGGCTTCCAGGCAGGCGAACGCGTGCATATCGAG
AACGGTACGCTGGTGGCGGGGTAA

Upstream 100 bases:

>100_bases
GGAGTACAGATGCTTACAATTTAAAACGGCATCCGTTTGGGCGATGGACCACACTGTGATCATCAAAACGCCGAATCGAT
CACGGCGCAGGAGAGCGATG

Downstream 100 bases:

>100_bases
TCCGGCTTCGCCTTCGCCCCAAAAGAAAAACCGGCCTTCGGGCCGGTTTTTTCATGCATACGCGTTTGAGGCTGCGCGCT
TATTCCGCTTCTTCGATCCA

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: Outer Membrane Lipoprotein; Membrane Spanning Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MNNNVQSNQGQQYGGTSPGQVPPSSRRMHPLMTTAAVAVIIASLTAVAAITGVLPTSKATQGSTDPNVAAQSAAAVAGAS
APMALAAPGQTTQPNQAAPYPAQNVAPALTRAREPSYAERAPSTSPSYAQTQPRQSASPYAGHVTSVTPITTQGKETGLG
MIGGAVVGGLLGNQIGRGNGRTLATVGGAVAGGYGGHVAENYYSRDTQYRVNVRMDNGTNRSFTYKAAPGFQAGERVHIE
NGTLVAG

Sequences:

>Translated_247_residues
MNNNVQSNQGQQYGGTSPGQVPPSSRRMHPLMTTAAVAVIIASLTAVAAITGVLPTSKATQGSTDPNVAAQSAAAVAGAS
APMALAAPGQTTQPNQAAPYPAQNVAPALTRAREPSYAERAPSTSPSYAQTQPRQSASPYAGHVTSVTPITTQGKETGLG
MIGGAVVGGLLGNQIGRGNGRTLATVGGAVAGGYGGHVAENYYSRDTQYRVNVRMDNGTNRSFTYKAAPGFQAGERVHIE
NGTLVAG
>Mature_247_residues
MNNNVQSNQGQQYGGTSPGQVPPSSRRMHPLMTTAAVAVIIASLTAVAAITGVLPTSKATQGSTDPNVAAQSAAAVAGAS
APMALAAPGQTTQPNQAAPYPAQNVAPALTRAREPSYAERAPSTSPSYAQTQPRQSASPYAGHVTSVTPITTQGKETGLG
MIGGAVVGGLLGNQIGRGNGRTLATVGGAVAGGYGGHVAENYYSRDTQYRVNVRMDNGTNRSFTYKAAPGFQAGERVHIE
NGTLVAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25005; Mature: 25005

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNVQSNQGQQYGGTSPGQVPPSSRRMHPLMTTAAVAVIIASLTAVAAITGVLPTSKAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
QGSTDPNVAAQSAAAVAGASAPMALAAPGQTTQPNQAAPYPAQNVAPALTRAREPSYAER
CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
APSTSPSYAQTQPRQSASPYAGHVTSVTPITTQGKETGLGMIGGAVVGGLLGNQIGRGNG
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
RTLATVGGAVAGGYGGHVAENYYSRDTQYRVNVRMDNGTNRSFTYKAAPGFQAGERVHIE
CEEEEECCHHHCCCCCHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEC
NGTLVAG
CCCEECC
>Mature Secondary Structure
MNNNVQSNQGQQYGGTSPGQVPPSSRRMHPLMTTAAVAVIIASLTAVAAITGVLPTSKAT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
QGSTDPNVAAQSAAAVAGASAPMALAAPGQTTQPNQAAPYPAQNVAPALTRAREPSYAER
CCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
APSTSPSYAQTQPRQSASPYAGHVTSVTPITTQGKETGLGMIGGAVVGGLLGNQIGRGNG
CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
RTLATVGGAVAGGYGGHVAENYYSRDTQYRVNVRMDNGTNRSFTYKAAPGFQAGERVHIE
CEEEEECCHHHCCCCCHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCEEEEC
NGTLVAG
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA