| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is rbsA3 [H]
Identifier: 187927976
GI number: 187927976
Start: 935108
End: 936688
Strand: Reverse
Name: rbsA3 [H]
Synonym: Rpic_0881
Alternate gene names: 187927976
Gene position: 936688-935108 (Counterclockwise)
Preceding gene: 187927977
Following gene: 187927975
Centisome position: 23.76
GC content: 67.87
Gene sequence:
>1581_bases ATGTCTGCCGCTTACGAACCGCGCCCGCCGCTGCTTCGTGTTTCCGCCGTCAGCAAGCACTACGCCGCCCCCGTGCTGCG AGATATCGATCTCGACGTGCACGCGGGCGAGGTGCTCGCGCTCACGGGGGAGAACGGCGCCGGCAAGAGCACGCTCTCCA AAATCCTCTGCGGGCTTGAGACGGCGACTTCCGGGTCGATGACGCTTGCCGGCACGCTCTACGCGCCTGATTCGCGCAGC GCAGCCGAGGCGCTGGGCGTGCGCATGGTGCTGCAGGAACTGAGCATGGTGCCGACGCTGACAGTGGCCGAAAACCTGTT CCTCGGCGAACTCCCCCGGCGGCTGGGTTTCGTGGATCGCTCTGCGCTGCGCTTTCGGGCCGAACAGGCGCTTGCGCGCG TGGGCCTGGACCTCGACCCCTGGACGCCCGTACACACGCTCGGCATCGGCCACCGGCAGATGATCGAGATTGCCCGCGCG TTGGCAAGCGCATGCCGTGTGCTGATCCTCGACGAGCCGACGGCGATGCTGAGCGCGCACGAAAGCGCCACGCTGTTCGA GCGCATCGACGCGCTGCGCCGCGAAGGCGTGGCGATCATCTACATCTCTCACCGCCTGGACGAACTGGCGCGCATTGCGG ATCGCATCGTCGTGCTGCGTGACGGCAAGCTCGTCACCGATGCGCCGGCTGCGACGGTCACGCAGGATGCGCTGATCCAG GCGATGGTCGGTCGCGACGTGGCCGCCTCGTCCGAAACGCAGCGGGCCGCGCGCGAACCGTGGCTCGGTGACGGCTCACC GGCGCTGCGGGTGACCGGGCTGACGCGTGCCCCGGCTGTGCGCGATGTGAGCTTTGACGTGGCGCCGGGGGAAATCTTTG GCATCGCGGGGCTGGTCGGCGCGGGGCGCACGGAACTGCTGCGACTGATCTTCGGTGCGGACCGCGCGGATGCGGGCAGC GTCGAAGTCGGCTCGCCGCTGGCGCCAGTGCGCATCCGTTCGCCGGGCGACGCGGTGCGCCACGGCATCAGCCTGCTCAC CGAAGACCGCAAGGACGAAGGCCTGATGCTGAGCCTGCCCATCGCGACCAACATCGCGCTGGGCAACATGCCAGGCGTAA CGAAGCGCGGCTGGCTGCAACCGGCACGCGAGCGGGTGCTGGCGCAGCGGCACATCGGCGCATTGCGCATCCGTTGCGCT GGGCCCGAGCAACCGGTCGGTGAACTCTCGGGCGGCAATCAGCAGAAGGTGGCGATTGCGCGCTGGCTGGAGCGCGACAC GCCTGTGCTGCTCTTCGATGAGCCCACGCGGGGTGTGGATGTCGGCGCCAAGTTCGACATCTATACGCTGCTCGACGCGC TGGCCGCGCGAGGCAAGGCGCTGGTCGTGGTGTCGAGCGATTTGCGTGAACTCATGCAGTTGTGTGATCGCATCGGCGTC ATGCGCGCCGGGCGGCTTACGCACATCTTCCAACGCGGTGGCTGGAGCCAGGACGCCTTGCTCGCCGCTGCCTTCGGTGA ATCGGAAGAATCCGATTCATATGCACCTCAATCACCCTCGGAGACCGCCGATGCGCTCTGA
Upstream 100 bases:
>100_bases CCGCCAAGACGCCGCAAGCGAAGCTGTCGGGTGTCGTCGAGACACCGGTCAACCTCGTCACGCGCACGTAACGCCACAGA CCGGCAAGCCGCCGCCAGCC
Downstream 100 bases:
>100_bases TTCCACCCTGCCCCCGACGCCGCCCGCTGCAACAGCCGGCACGCGCGCGGCGCTGGGCATGTCGCTTGGCACCATCGGCG GGTTGCTCGCTGCGCTGGTC
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MSAAYEPRPPLLRVSAVSKHYAAPVLRDIDLDVHAGEVLALTGENGAGKSTLSKILCGLETATSGSMTLAGTLYAPDSRS AAEALGVRMVLQELSMVPTLTVAENLFLGELPRRLGFVDRSALRFRAEQALARVGLDLDPWTPVHTLGIGHRQMIEIARA LASACRVLILDEPTAMLSAHESATLFERIDALRREGVAIIYISHRLDELARIADRIVVLRDGKLVTDAPAATVTQDALIQ AMVGRDVAASSETQRAAREPWLGDGSPALRVTGLTRAPAVRDVSFDVAPGEIFGIAGLVGAGRTELLRLIFGADRADAGS VEVGSPLAPVRIRSPGDAVRHGISLLTEDRKDEGLMLSLPIATNIALGNMPGVTKRGWLQPARERVLAQRHIGALRIRCA GPEQPVGELSGGNQQKVAIARWLERDTPVLLFDEPTRGVDVGAKFDIYTLLDALAARGKALVVVSSDLRELMQLCDRIGV MRAGRLTHIFQRGGWSQDALLAAAFGESEESDSYAPQSPSETADAL
Sequences:
>Translated_526_residues MSAAYEPRPPLLRVSAVSKHYAAPVLRDIDLDVHAGEVLALTGENGAGKSTLSKILCGLETATSGSMTLAGTLYAPDSRS AAEALGVRMVLQELSMVPTLTVAENLFLGELPRRLGFVDRSALRFRAEQALARVGLDLDPWTPVHTLGIGHRQMIEIARA LASACRVLILDEPTAMLSAHESATLFERIDALRREGVAIIYISHRLDELARIADRIVVLRDGKLVTDAPAATVTQDALIQ AMVGRDVAASSETQRAAREPWLGDGSPALRVTGLTRAPAVRDVSFDVAPGEIFGIAGLVGAGRTELLRLIFGADRADAGS VEVGSPLAPVRIRSPGDAVRHGISLLTEDRKDEGLMLSLPIATNIALGNMPGVTKRGWLQPARERVLAQRHIGALRIRCA GPEQPVGELSGGNQQKVAIARWLERDTPVLLFDEPTRGVDVGAKFDIYTLLDALAARGKALVVVSSDLRELMQLCDRIGV MRAGRLTHIFQRGGWSQDALLAAAFGESEESDSYAPQSPSETADAL >Mature_525_residues SAAYEPRPPLLRVSAVSKHYAAPVLRDIDLDVHAGEVLALTGENGAGKSTLSKILCGLETATSGSMTLAGTLYAPDSRSA AEALGVRMVLQELSMVPTLTVAENLFLGELPRRLGFVDRSALRFRAEQALARVGLDLDPWTPVHTLGIGHRQMIEIARAL ASACRVLILDEPTAMLSAHESATLFERIDALRREGVAIIYISHRLDELARIADRIVVLRDGKLVTDAPAATVTQDALIQA MVGRDVAASSETQRAAREPWLGDGSPALRVTGLTRAPAVRDVSFDVAPGEIFGIAGLVGAGRTELLRLIFGADRADAGSV EVGSPLAPVRIRSPGDAVRHGISLLTEDRKDEGLMLSLPIATNIALGNMPGVTKRGWLQPARERVLAQRHIGALRIRCAG PEQPVGELSGGNQQKVAIARWLERDTPVLLFDEPTRGVDVGAKFDIYTLLDALAARGKALVVVSSDLRELMQLCDRIGVM RAGRLTHIFQRGGWSQDALLAAAFGESEESDSYAPQSPSETADAL
Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system [H]
COG id: COG1129
COG function: function code G; ABC-type sugar transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI31657092, Length=226, Percent_Identity=29.646017699115, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI116734710, Length=202, Percent_Identity=31.6831683168317, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI47078218, Length=214, Percent_Identity=28.5046728971963, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI45446740, Length=214, Percent_Identity=28.5046728971963, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI27881501, Length=229, Percent_Identity=30.1310043668122, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI30795238, Length=229, Percent_Identity=30.1310043668122, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI21536376, Length=228, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI150417984, Length=226, Percent_Identity=28.7610619469027, Blast_Score=76, Evalue=8e-14, Organism=Homo sapiens, GI105990541, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI153792144, Length=253, Percent_Identity=28.8537549407115, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI27262624, Length=223, Percent_Identity=27.8026905829596, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI27262626, Length=223, Percent_Identity=27.8026905829596, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI9961252, Length=214, Percent_Identity=28.9719626168224, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI4505771, Length=214, Percent_Identity=29.9065420560748, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI27477115, Length=241, Percent_Identity=29.8755186721992, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI42741659, Length=215, Percent_Identity=29.7674418604651, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI9961250, Length=215, Percent_Identity=29.3023255813954, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI27436953, Length=243, Percent_Identity=25.5144032921811, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI11967969, Length=212, Percent_Identity=33.4905660377358, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI6005701, Length=232, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1788210, Length=486, Percent_Identity=43.4156378600823, Blast_Score=359, Evalue=1e-100, Organism=Escherichia coli, GI1790525, Length=510, Percent_Identity=39.4117647058824, Blast_Score=355, Evalue=4e-99, Organism=Escherichia coli, GI1790190, Length=503, Percent_Identity=39.9602385685885, Blast_Score=337, Evalue=9e-94, Organism=Escherichia coli, GI1788472, Length=503, Percent_Identity=38.5685884691849, Blast_Score=337, Evalue=1e-93, Organism=Escherichia coli, GI48995001, Length=476, Percent_Identity=38.8655462184874, Blast_Score=326, Evalue=3e-90, Organism=Escherichia coli, GI1789991, Length=509, Percent_Identity=37.721021611002, Blast_Score=325, Evalue=4e-90, Organism=Escherichia coli, GI1788897, Length=489, Percent_Identity=39.0593047034765, Blast_Score=317, Evalue=1e-87, Organism=Escherichia coli, GI1787792, Length=517, Percent_Identity=37.330754352031, Blast_Score=307, Evalue=8e-85, Organism=Escherichia coli, GI145693107, Length=559, Percent_Identity=27.5491949910555, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1788506, Length=499, Percent_Identity=29.0581162324649, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1787105, Length=232, Percent_Identity=34.051724137931, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI48994943, Length=557, Percent_Identity=25.4937163375224, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI1787089, Length=234, Percent_Identity=34.1880341880342, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1787029, Length=230, Percent_Identity=29.5652173913043, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1787370, Length=231, Percent_Identity=29.8701298701299, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=34.5454545454545, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI87081791, Length=230, Percent_Identity=29.5652173913043, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI87081834, Length=226, Percent_Identity=31.858407079646, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI87082268, Length=250, Percent_Identity=29.6, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1786398, Length=279, Percent_Identity=29.3906810035842, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1790544, Length=239, Percent_Identity=32.6359832635983, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1788761, Length=224, Percent_Identity=33.0357142857143, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1789891, Length=233, Percent_Identity=33.9055793991416, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1787164, Length=220, Percent_Identity=35, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786872, Length=229, Percent_Identity=30.5676855895196, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788225, Length=227, Percent_Identity=30.3964757709251, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1786319, Length=225, Percent_Identity=32.4444444444444, Blast_Score=89, Evalue=8e-19, Organism=Escherichia coli, GI1786703, Length=223, Percent_Identity=34.5291479820628, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87081709, Length=217, Percent_Identity=26.2672811059908, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1787712, Length=203, Percent_Identity=26.6009852216749, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1789873, Length=219, Percent_Identity=29.6803652968037, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789032, Length=206, Percent_Identity=31.5533980582524, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786563, Length=215, Percent_Identity=29.7674418604651, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87081782, Length=225, Percent_Identity=29.3333333333333, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1786253, Length=221, Percent_Identity=33.0316742081448, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=27.2, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786345, Length=227, Percent_Identity=30.3964757709251, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1787500, Length=249, Percent_Identity=30.1204819277108, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1789672, Length=236, Percent_Identity=25, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87082267, Length=219, Percent_Identity=29.6803652968037, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787758, Length=217, Percent_Identity=32.258064516129, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789962, Length=234, Percent_Identity=29.9145299145299, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1786803, Length=229, Percent_Identity=30.5676855895196, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790739, Length=220, Percent_Identity=29.5454545454545, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1787547, Length=215, Percent_Identity=28.3720930232558, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788165, Length=198, Percent_Identity=32.8282828282828, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788450, Length=245, Percent_Identity=29.3877551020408, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788644, Length=229, Percent_Identity=29.6943231441048, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786654, Length=212, Percent_Identity=32.5471698113208, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786698, Length=224, Percent_Identity=29.0178571428571, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI48994883, Length=226, Percent_Identity=29.2035398230088, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790162, Length=252, Percent_Identity=26.5873015873016, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789593, Length=227, Percent_Identity=25.5506607929515, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1787548, Length=240, Percent_Identity=30, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1789963, Length=242, Percent_Identity=28.9256198347107, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI48994997, Length=233, Percent_Identity=32.1888412017167, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790534, Length=224, Percent_Identity=30.8035714285714, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115533608, Length=339, Percent_Identity=25.6637168141593, Blast_Score=92, Evalue=7e-19, Organism=Caenorhabditis elegans, GI25146777, Length=218, Percent_Identity=27.5229357798165, Blast_Score=79, Evalue=8e-15, Organism=Caenorhabditis elegans, GI193209708, Length=237, Percent_Identity=31.6455696202532, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193208177, Length=242, Percent_Identity=32.2314049586777, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71988343, Length=260, Percent_Identity=28.4615384615385, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17565586, Length=205, Percent_Identity=28.2926829268293, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71984940, Length=248, Percent_Identity=30.241935483871, Blast_Score=69, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71983510, Length=227, Percent_Identity=28.6343612334802, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983516, Length=227, Percent_Identity=28.6343612334802, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983523, Length=227, Percent_Identity=28.6343612334802, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17565938, Length=207, Percent_Identity=32.3671497584541, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321081, Length=260, Percent_Identity=26.1538461538462, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6319856, Length=221, Percent_Identity=28.9592760180996, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007184, Length=214, Percent_Identity=31.3084112149533, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI221500365, Length=214, Percent_Identity=31.3084112149533, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI28571209, Length=203, Percent_Identity=32.0197044334975, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI24666092, Length=218, Percent_Identity=25.6880733944954, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24648314, Length=246, Percent_Identity=22.3577235772358, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI221512771, Length=203, Percent_Identity=24.6305418719212, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221500419, Length=222, Percent_Identity=24.7747747747748, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552345, Length=211, Percent_Identity=27.0142180094787, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552343, Length=211, Percent_Identity=27.0142180094787, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI45552363, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI45552357, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI45552359, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI45550972, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI45552335, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552353, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI24583969, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552349, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552361, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552341, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552355, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=9e-11, Organism=Drosophila melanogaster, GI45552351, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015861 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.17 [H]
Molecular weight: Translated: 56252; Mature: 56121
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAYEPRPPLLRVSAVSKHYAAPVLRDIDLDVHAGEVLALTGENGAGKSTLSKILCGLE CCCCCCCCCCEEEEHHHHHHHHCCHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHCCC TATSGSMTLAGTLYAPDSRSAAEALGVRMVLQELSMVPTLTVAENLFLGELPRRLGFVDR CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH SALRFRAEQALARVGLDLDPWTPVHTLGIGHRQMIEIARALASACRVLILDEPTAMLSAH HHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHCC ESATLFERIDALRREGVAIIYISHRLDELARIADRIVVLRDGKLVTDAPAATVTQDALIQ HHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHEEEEEECCEEEECCCCHHHHHHHHHH AMVGRDVAASSETQRAAREPWLGDGSPALRVTGLTRAPAVRDVSFDVAPGEIFGIAGLVG HHHCCCHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCEECCEEECCCCHHHHHHHHHC AGRTELLRLIFGADRADAGSVEVGSPLAPVRIRSPGDAVRHGISLLTEDRKDEGLMLSLP CCHHHHHHHHHCCCCCCCCCEECCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCEEEEEC IATNIALGNMPGVTKRGWLQPARERVLAQRHIGALRIRCAGPEQPVGELSGGNQQKVAIA CCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHCCCCCCHHHHHH RWLERDTPVLLFDEPTRGVDVGAKFDIYTLLDALAARGKALVVVSSDLRELMQLCDRIGV HHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCH MRAGRLTHIFQRGGWSQDALLAAAFGESEESDSYAPQSPSETADAL HHCCHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure SAAYEPRPPLLRVSAVSKHYAAPVLRDIDLDVHAGEVLALTGENGAGKSTLSKILCGLE CCCCCCCCCEEEEHHHHHHHHCCHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHCCC TATSGSMTLAGTLYAPDSRSAAEALGVRMVLQELSMVPTLTVAENLFLGELPRRLGFVDR CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCH SALRFRAEQALARVGLDLDPWTPVHTLGIGHRQMIEIARALASACRVLILDEPTAMLSAH HHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHCC ESATLFERIDALRREGVAIIYISHRLDELARIADRIVVLRDGKLVTDAPAATVTQDALIQ HHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHEEEEEECCEEEECCCCHHHHHHHHHH AMVGRDVAASSETQRAAREPWLGDGSPALRVTGLTRAPAVRDVSFDVAPGEIFGIAGLVG HHHCCCHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCEECCEEECCCCHHHHHHHHHC AGRTELLRLIFGADRADAGSVEVGSPLAPVRIRSPGDAVRHGISLLTEDRKDEGLMLSLP CCHHHHHHHHHCCCCCCCCCEECCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCEEEEEC IATNIALGNMPGVTKRGWLQPARERVLAQRHIGALRIRCAGPEQPVGELSGGNQQKVAIA CCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHCCCCCCHHHHHH RWLERDTPVLLFDEPTRGVDVGAKFDIYTLLDALAARGKALVVVSSDLRELMQLCDRIGV HHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCH MRAGRLTHIFQRGGWSQDALLAAAFGESEESDSYAPQSPSETADAL HHCCHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA