| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927964
Identifier: 187927964
GI number: 187927964
Start: 919239
End: 921083
Strand: Reverse
Name: 187927964
Synonym: Rpic_0869
Alternate gene names: NA
Gene position: 921083-919239 (Counterclockwise)
Preceding gene: 187927966
Following gene: 187927962
Centisome position: 23.36
GC content: 64.07
Gene sequence:
>1845_bases GTGAAGGTGTTCGTCACCCTGAAGAAGGCCATTATCGCCATGAAAAAATCCAGGTTATCGACCAGTGATTTTGCAGGATT GTCCCGGACCTTCGGTGTATCGTTTGCGGCCGCAGCGCTGTCCGCGGTGCTGCTGGCGGGTTGCGGCGGCGGAGACTCTT CCGCCACGGCCAATCCCAGCGGCGTAGCCACCAACGCCGGCAACGCCACCACGCAGCCGGTAACGGCCGCCGTGCCGCCC GACCAGCCTTACGTCGACCCGAACGTCTACGGCACCGGGCCCAACGACGCGCTTGCCGCCGATCCGGGCGAAAGCGCGGC CGTCACGCATCACACGGTGACGATCGGCGGCAAGAGCATCGCCTACACAGCCACCGCCGGCCACCTGACCACCATCGACC CGGTCACCTCGCGATCCAACGCGACGATGTTCTACGTGGCCTACACGCAGGACAATCCCGATCCATCGAAGCCGCGTCCG GTGACGTTCTTCTATAACGGCGGCCCGGGCTCGTCGTCGGTGTTCCTGCTGCTGGGCTCGTTCGGGCCGAAGCGGCTGCA GTCGTCGTTCCCGAACTTCACGCCCCCGGCGCCGTACAAGCTGCCCGACAACCCGGACAGCCTGCTCGACCGCTCCGATC TCGTGTTCATCAACCCGGTAGGCACCGGATATTCGGCCGCCATTGCACCGGCCAAGAACAAGGACTTCTGGGGCACCGAC CAGGACGCCCGCTCCATCGACCGCTTCATCCAGCGCTACCTGACCAAGAACTCGCGCTGGAACTCACCCAAGTTCCTGTA CGGCGAGTCGTATGGCACGGCGCGCAGTGCGGTGCTGTCGTGGGTGCTGCATGAAGACGGTATCGAGCTGAACGGGATCA CGCTGCAATCGTCGATCCTCGACTACGCGAATGCACTCTCGGCCGTCGGCACCTTCCCGACGCTGGCCGCCGACGCGTTC TACTGGAAGAAGACGACGCTCAACCCGGCACCGACCGACCTCGACGGCTACATGGTCCAGGCCCGCAACTACGCCGACAA CACGCTCGCCCCGCTGGCACAAGCGCCGAGCGCCGCAGATGGCGGGTTCGTCAACGTGCGCCTGAACCTGAACCTGGCGA CGGCGCAGACGATGGGCTCGTACATCGGCACCGATCCGGTCTCGCTGATCCAGACGTTCGGCAACCCGGCGGCGCTGGGC AACGTGCCGTCGCAGAACAACAACCCGCCGTACACGTTCTTCCTGACGCTCAACCCGGGCATCCAGATCGGCCAGTATGA CGGCCGCGCCAACTACACGGGCCAGGGCATCGCGCCGTTCATCTTGCCGAACTCGGGCAGCAACGATCCGTCGATCTCGA ATATCGGGGGCGCGTACACGGTGCTTTGGAACAGCTACCTGAACACCCAGCTCAAGTACACGTCGACCTCCTCGTTCGTG GACCTGAACGACGCCGTGTTCAACAACTGGGATTTCAGCCACGTCGACCCGACGGGCGCCAACAAGGGCGGCGGCAACAC GCTGTACACCGCCGGCGATCTCGCCTCGACGATGAGCCTGAACCCCGACCTGAAGGTGCTGCAGGCCAGCGGCTATTTCG ACGCCGTCACGCCGTTCCACCAGACCGAGCTGACGCTGGCGCAAATGCCGCTTGATCCGACGCTCAAGGCGAAAAACCTG ACGATCAAGAATTACCCGTCGGGCCACATGATCTATCTGAACGATGCGTCGCGCACCGCGTTCAAGGGTGATCTGGCTTC GTTCTACGATGGCGTGATGGCCGATCGTCCGGCCCTGATGCGGGTGCAGAGCCTGCAACGCCTGCCGAGCGGCCCGAAGA AGTAA
Upstream 100 bases:
>100_bases TCCGCAAACAAGGCGGGAAATCAGAATATTCGTTTCGCGTCGTATAGAAATGACAAAACGCAAATCGAATATGGAGCCCA CTTAAAACCACACGTTTTAA
Downstream 100 bases:
>100_bases TCGCCTCAAGGCAGAAAGCAAAACCGCCCAGTTCACGCTGGGCGGTTTTTTGTTGCGCGTGAGGACCCGGCTTCAGGCCA TGTCATCCGCAGTGTGGCCA
Product: peptidase S10 serine carboxypeptidase
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MKVFVTLKKAIIAMKKSRLSTSDFAGLSRTFGVSFAAAALSAVLLAGCGGGDSSATANPSGVATNAGNATTQPVTAAVPP DQPYVDPNVYGTGPNDALAADPGESAAVTHHTVTIGGKSIAYTATAGHLTTIDPVTSRSNATMFYVAYTQDNPDPSKPRP VTFFYNGGPGSSSVFLLLGSFGPKRLQSSFPNFTPPAPYKLPDNPDSLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGTD QDARSIDRFIQRYLTKNSRWNSPKFLYGESYGTARSAVLSWVLHEDGIELNGITLQSSILDYANALSAVGTFPTLAADAF YWKKTTLNPAPTDLDGYMVQARNYADNTLAPLAQAPSAADGGFVNVRLNLNLATAQTMGSYIGTDPVSLIQTFGNPAALG NVPSQNNNPPYTFFLTLNPGIQIGQYDGRANYTGQGIAPFILPNSGSNDPSISNIGGAYTVLWNSYLNTQLKYTSTSSFV DLNDAVFNNWDFSHVDPTGANKGGGNTLYTAGDLASTMSLNPDLKVLQASGYFDAVTPFHQTELTLAQMPLDPTLKAKNL TIKNYPSGHMIYLNDASRTAFKGDLASFYDGVMADRPALMRVQSLQRLPSGPKK
Sequences:
>Translated_614_residues MKVFVTLKKAIIAMKKSRLSTSDFAGLSRTFGVSFAAAALSAVLLAGCGGGDSSATANPSGVATNAGNATTQPVTAAVPP DQPYVDPNVYGTGPNDALAADPGESAAVTHHTVTIGGKSIAYTATAGHLTTIDPVTSRSNATMFYVAYTQDNPDPSKPRP VTFFYNGGPGSSSVFLLLGSFGPKRLQSSFPNFTPPAPYKLPDNPDSLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGTD QDARSIDRFIQRYLTKNSRWNSPKFLYGESYGTARSAVLSWVLHEDGIELNGITLQSSILDYANALSAVGTFPTLAADAF YWKKTTLNPAPTDLDGYMVQARNYADNTLAPLAQAPSAADGGFVNVRLNLNLATAQTMGSYIGTDPVSLIQTFGNPAALG NVPSQNNNPPYTFFLTLNPGIQIGQYDGRANYTGQGIAPFILPNSGSNDPSISNIGGAYTVLWNSYLNTQLKYTSTSSFV DLNDAVFNNWDFSHVDPTGANKGGGNTLYTAGDLASTMSLNPDLKVLQASGYFDAVTPFHQTELTLAQMPLDPTLKAKNL TIKNYPSGHMIYLNDASRTAFKGDLASFYDGVMADRPALMRVQSLQRLPSGPKK >Mature_614_residues MKVFVTLKKAIIAMKKSRLSTSDFAGLSRTFGVSFAAAALSAVLLAGCGGGDSSATANPSGVATNAGNATTQPVTAAVPP DQPYVDPNVYGTGPNDALAADPGESAAVTHHTVTIGGKSIAYTATAGHLTTIDPVTSRSNATMFYVAYTQDNPDPSKPRP VTFFYNGGPGSSSVFLLLGSFGPKRLQSSFPNFTPPAPYKLPDNPDSLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGTD QDARSIDRFIQRYLTKNSRWNSPKFLYGESYGTARSAVLSWVLHEDGIELNGITLQSSILDYANALSAVGTFPTLAADAF YWKKTTLNPAPTDLDGYMVQARNYADNTLAPLAQAPSAADGGFVNVRLNLNLATAQTMGSYIGTDPVSLIQTFGNPAALG NVPSQNNNPPYTFFLTLNPGIQIGQYDGRANYTGQGIAPFILPNSGSNDPSISNIGGAYTVLWNSYLNTQLKYTSTSSFV DLNDAVFNNWDFSHVDPTGANKGGGNTLYTAGDLASTMSLNPDLKVLQASGYFDAVTPFHQTELTLAQMPLDPTLKAKNL TIKNYPSGHMIYLNDASRTAFKGDLASFYDGVMADRPALMRVQSLQRLPSGPKK
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65239; Mature: 65239
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFVTLKKAIIAMKKSRLSTSDFAGLSRTFGVSFAAAALSAVLLAGCGGGDSSATANPS CEEEEEEHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GVATNAGNATTQPVTAAVPPDQPYVDPNVYGTGPNDALAADPGESAAVTHHTVTIGGKSI CCEECCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEEECCCEE AYTATAGHLTTIDPVTSRSNATMFYVAYTQDNPDPSKPRPVTFFYNGGPGSSSVFLLLGS EEEEECCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEC FGPKRLQSSFPNFTPPAPYKLPDNPDSLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGTD CCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCC QDARSIDRFIQRYLTKNSRWNSPKFLYGESYGTARSAVLSWVLHEDGIELNGITLQSSIL HHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEECCEEEHHHHH DYANALSAVGTFPTLAADAFYWKKTTLNPAPTDLDGYMVQARNYADNTLAPLAQAPSAAD HHHHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCC GGFVNVRLNLNLATAQTMGSYIGTDPVSLIQTFGNPAALGNVPSQNNNPPYTFFLTLNPG CCEEEEEEEEEEHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCC IQIGQYDGRANYTGQGIAPFILPNSGSNDPSISNIGGAYTVLWNSYLNTQLKYTSTSSFV EEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHHCCEEEEECCCCEE DLNDAVFNNWDFSHVDPTGANKGGGNTLYTAGDLASTMSLNPDLKVLQASGYFDAVTPFH ECCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHEECCCCEEEEEECCCCCCCCCCC QTELTLAQMPLDPTLKAKNLTIKNYPSGHMIYLNDASRTAFKGDLASFYDGVMADRPALM CCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHCCCHHHHHHHHHCCCHHHH RVQSLQRLPSGPKK HHHHHHHCCCCCCC >Mature Secondary Structure MKVFVTLKKAIIAMKKSRLSTSDFAGLSRTFGVSFAAAALSAVLLAGCGGGDSSATANPS CEEEEEEHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC GVATNAGNATTQPVTAAVPPDQPYVDPNVYGTGPNDALAADPGESAAVTHHTVTIGGKSI CCEECCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEEEECCCEE AYTATAGHLTTIDPVTSRSNATMFYVAYTQDNPDPSKPRPVTFFYNGGPGSSSVFLLLGS EEEEECCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEEC FGPKRLQSSFPNFTPPAPYKLPDNPDSLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGTD CCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCEEECCCCCCCCCCCC QDARSIDRFIQRYLTKNSRWNSPKFLYGESYGTARSAVLSWVLHEDGIELNGITLQSSIL HHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCEECCEEEHHHHH DYANALSAVGTFPTLAADAFYWKKTTLNPAPTDLDGYMVQARNYADNTLAPLAQAPSAAD HHHHHHHHHCCCHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCC GGFVNVRLNLNLATAQTMGSYIGTDPVSLIQTFGNPAALGNVPSQNNNPPYTFFLTLNPG CCEEEEEEEEEEHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCC IQIGQYDGRANYTGQGIAPFILPNSGSNDPSISNIGGAYTVLWNSYLNTQLKYTSTSSFV EEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHHCCEEEEECCCCEE DLNDAVFNNWDFSHVDPTGANKGGGNTLYTAGDLASTMSLNPDLKVLQASGYFDAVTPFH ECCHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHEECCCCEEEEEECCCCCCCCCCC QTELTLAQMPLDPTLKAKNLTIKNYPSGHMIYLNDASRTAFKGDLASFYDGVMADRPALM CCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHCCCHHHHHHHHHCCCHHHH RVQSLQRLPSGPKK HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA