| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
Click here to switch to the map view.
The map label for this gene is 187927962
Identifier: 187927962
GI number: 187927962
Start: 917678
End: 918112
Strand: Reverse
Name: 187927962
Synonym: Rpic_0867
Alternate gene names: NA
Gene position: 918112-917678 (Counterclockwise)
Preceding gene: 187927964
Following gene: 187927959
Centisome position: 23.29
GC content: 65.52
Gene sequence:
>435_bases ATGTTCAATCCCTCCCGCGACGAAGTCCGTCAATTCTTCTGCGGCGCGTGGCGCAAGCACCGCCAAGCAGAAATCCTCAC GCCGCTCGAAGCCATGGCGCTCGACTGGATGCTGCAGCATCCCGAATACCACGACACCCTGGAAGCCGGCGAAGAAGCGC TCGCCCGCGACTACACGCCGGAAAGCGGCCAGAGCAACCCGTTCCTGCACCTGTCGATGCACCTGTCGATCAGCGAGCAG GTGTCCGTGGATCAGCCGCGCGGCATTCGCGCTGCGTATGAAGCGCTGGCCCAGCGGCTCGACTCGCCGCACGAAGCGCA CCATCAGGTGATGGAATGCCTGGGCCAGATGCTGTGGACGGCGCAGCGCACCGGCCTGCCGCCCGACGGCGACGCCTATA TCGAATGCGTGCGCAAGCGCGCAACTGCCCGCTGA
Upstream 100 bases:
>100_bases TTGGTGTCGCCGTCTGCGGGTGCGGGGCGGCCATTGTAGCGTTGCCGTCTCGCCAAGCGGCCCGGCAGGCATGAAGGCGC GCCGGTACAATGGCGAAATC
Downstream 100 bases:
>100_bases ATCTGATGCTCGAACGCCAACAAAAAACCGCTCCGAAGAGCGGTTTTTTTTTGACCGGCGATGCCGCATCACTTCTTCAG CACCAGCGAGCCCGGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MFNPSRDEVRQFFCGAWRKHRQAEILTPLEAMALDWMLQHPEYHDTLEAGEEALARDYTPESGQSNPFLHLSMHLSISEQ VSVDQPRGIRAAYEALAQRLDSPHEAHHQVMECLGQMLWTAQRTGLPPDGDAYIECVRKRATAR
Sequences:
>Translated_144_residues MFNPSRDEVRQFFCGAWRKHRQAEILTPLEAMALDWMLQHPEYHDTLEAGEEALARDYTPESGQSNPFLHLSMHLSISEQ VSVDQPRGIRAAYEALAQRLDSPHEAHHQVMECLGQMLWTAQRTGLPPDGDAYIECVRKRATAR >Mature_144_residues MFNPSRDEVRQFFCGAWRKHRQAEILTPLEAMALDWMLQHPEYHDTLEAGEEALARDYTPESGQSNPFLHLSMHLSISEQ VSVDQPRGIRAAYEALAQRLDSPHEAHHQVMECLGQMLWTAQRTGLPPDGDAYIECVRKRATAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16498; Mature: 16498
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNPSRDEVRQFFCGAWRKHRQAEILTPLEAMALDWMLQHPEYHDTLEAGEEALARDYTP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC ESGQSNPFLHLSMHLSISEQVSVDQPRGIRAAYEALAQRLDSPHEAHHQVMECLGQMLWT CCCCCCCEEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AQRTGLPPDGDAYIECVRKRATAR HHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MFNPSRDEVRQFFCGAWRKHRQAEILTPLEAMALDWMLQHPEYHDTLEAGEEALARDYTP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC ESGQSNPFLHLSMHLSISEQVSVDQPRGIRAAYEALAQRLDSPHEAHHQVMECLGQMLWT CCCCCCCEEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AQRTGLPPDGDAYIECVRKRATAR HHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA