| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is 187927953
Identifier: 187927953
GI number: 187927953
Start: 910878
End: 911387
Strand: Direct
Name: 187927953
Synonym: Rpic_0858
Alternate gene names: NA
Gene position: 910878-911387 (Clockwise)
Preceding gene: 187927951
Following gene: 187927954
Centisome position: 23.1
GC content: 61.57
Gene sequence:
>510_bases ATGACCACACCTTCGATGTACGAGTTTCTCGTACCGACTGCCAACCGCATGCTCGGCAACCTGTCGGCGCTGCTCGACAA GGCGGCTGCCCACGCAGAAGCGAAGAAGTTCGACCCGGCCAATCTGATGACCGCGCGTCTGGCGCCAGACATGCATCCGT TCACGCGGCAGGTGCAGATTGCCTGTGATCAGGCCAAGGGCGGCGCGGCGCGTTTGTCGGGCAACGAGGTGCCGTCGTAC CCGGATGTGGAGACGACCATTCCAGAGCTGAAGGCGCGCATTGCCAAGACACTGGAGTTCGTCAACAGCATCGACCCCGC GGCATTTGCCGGCAGCGAAGATCGCCAGATCACGCTCAAGAGCCCGACCCGCGAACTGCAGTTCACGGGCATCGATTACC TGCGCGGTTTCGTGCTGCCGAACCTGTATTTCCATGTCACCACAGCTTATGCGCTGCTGCGCCACAACGGCGTGGAAATC GGCAAGCTGGACTTCCTGGGCCATCCCTGA
Upstream 100 bases:
>100_bases TCGCTGGCCTACACTGTGCCCTGCGCAAGAGCGCGCTGCCGCAGGGTCGCGCAGAAGATCGTCGGCGGCCACAACGATGG ATACCAAGGAAAGCACTCCC
Downstream 100 bases:
>100_bases GGTTCGCTTCGCTCAGGCCATTGCCCCATCGACCCTGAAGACCGGCTCTATGCGGCTTCCGGGCGAGCAGGGCGCAGACG TCAAGGGCGCGGCATCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTTPSMYEFLVPTANRMLGNLSALLDKAAAHAEAKKFDPANLMTARLAPDMHPFTRQVQIACDQAKGGAARLSGNEVPSY PDVETTIPELKARIAKTLEFVNSIDPAAFAGSEDRQITLKSPTRELQFTGIDYLRGFVLPNLYFHVTTAYALLRHNGVEI GKLDFLGHP
Sequences:
>Translated_169_residues MTTPSMYEFLVPTANRMLGNLSALLDKAAAHAEAKKFDPANLMTARLAPDMHPFTRQVQIACDQAKGGAARLSGNEVPSY PDVETTIPELKARIAKTLEFVNSIDPAAFAGSEDRQITLKSPTRELQFTGIDYLRGFVLPNLYFHVTTAYALLRHNGVEI GKLDFLGHP >Mature_168_residues TTPSMYEFLVPTANRMLGNLSALLDKAAAHAEAKKFDPANLMTARLAPDMHPFTRQVQIACDQAKGGAARLSGNEVPSYP DVETTIPELKARIAKTLEFVNSIDPAAFAGSEDRQITLKSPTRELQFTGIDYLRGFVLPNLYFHVTTAYALLRHNGVEIG KLDFLGHP
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18559; Mature: 18428
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPSMYEFLVPTANRMLGNLSALLDKAAAHAEAKKFDPANLMTARLAPDMHPFTRQVQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHEE ACDQAKGGAARLSGNEVPSYPDVETTIPELKARIAKTLEFVNSIDPAAFAGSEDRQITLK EEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEC SPTRELQFTGIDYLRGFVLPNLYFHVTTAYALLRHNGVEIGKLDFLGHP CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure TTPSMYEFLVPTANRMLGNLSALLDKAAAHAEAKKFDPANLMTARLAPDMHPFTRQVQI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHEE ACDQAKGGAARLSGNEVPSYPDVETTIPELKARIAKTLEFVNSIDPAAFAGSEDRQITLK EEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEC SPTRELQFTGIDYLRGFVLPNLYFHVTTAYALLRHNGVEIGKLDFLGHP CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA