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The map label for this gene is 187927951

Identifier: 187927951

GI number: 187927951

Start: 909221

End: 909634

Strand: Direct

Name: 187927951

Synonym: Rpic_0856

Alternate gene names: NA

Gene position: 909221-909634 (Clockwise)

Preceding gene: 187927950

Following gene: 187927953

Centisome position: 23.06

GC content: 61.84

Gene sequence:

>414_bases
TTGCTGCCCAGGTGTCAAATTAACCAAAATATCAACCAGTTCTGGCGCCTGGCCGGCGAGGTGATCGGCCAGGATTTACC
GGGCATGGAATACGCCGCGCGTTTGCAGGTGCTGCTTGCGCATCGCATCGGCCTGTGGGATGTGGTGGCCGAAGCCAAGC
GCGAAGGCAGTCTCGACAGCAAGATCCGGGACCATGCCGGTAATGACCTTGCCGGCTTGATCGCCTCTTTGCCGGAACTG
GCGCTCATTGCCTTTAACGGCGGCACCGCGTCGCGCATTGGCGTAAAGGCGCTGGGCGACATCGGCGACCGCCACACCAT
CCTCAAACTCCCTTCCAGCAGTCCGGCCTATGCAGCCGTGCCGTATGCCCAGAAGTTGGCGGCGTGGCAAGCGCTGCGTG
AGTGGCTGTCGTAG

Upstream 100 bases:

>100_bases
GACCTGATGGAGTTTTGACCCTACGTCCACTCAATTCAATCCATCTTCGCAACACAGTGGTCCCGGCCCGGGTCGTTCGC
AATCATTCTGTGCGAGAAGC

Downstream 100 bases:

>100_bases
CTTCCCGCTACCTGGTCTGCCCTTCGTACAAGCCGGTCACGTCATCCATCATCTGAAGAATGCGCTCGCTGGTTGCGATC
AGCGCAGCGACATGTGCCCG

Product: G:T/U mismatch-specific DNA glycosylase

Products: NA

Alternate protein names: GT/U Mismatch-Specific DNA Glycosylase; Uracil-DNA Glycosylase Superfamily; Mug GT/U Mismatch-Specific DNA Glycosylase; G-T/U Mismatch-Specific DNA Glycosylase-Like; DNA Glycosylase; Uracil DNA Glycosylase Superfamily; G/U Mismatch-Specific DNA Glycosylase; T/U Mismatch-Specific DNA Glycosylase

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLPRCQINQNINQFWRLAGEVIGQDLPGMEYAARLQVLLAHRIGLWDVVAEAKREGSLDSKIRDHAGNDLAGLIASLPEL
ALIAFNGGTASRIGVKALGDIGDRHTILKLPSSSPAYAAVPYAQKLAAWQALREWLS

Sequences:

>Translated_137_residues
MLPRCQINQNINQFWRLAGEVIGQDLPGMEYAARLQVLLAHRIGLWDVVAEAKREGSLDSKIRDHAGNDLAGLIASLPEL
ALIAFNGGTASRIGVKALGDIGDRHTILKLPSSSPAYAAVPYAQKLAAWQALREWLS
>Mature_137_residues
MLPRCQINQNINQFWRLAGEVIGQDLPGMEYAARLQVLLAHRIGLWDVVAEAKREGSLDSKIRDHAGNDLAGLIASLPEL
ALIAFNGGTASRIGVKALGDIGDRHTILKLPSSSPAYAAVPYAQKLAAWQALREWLS

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14882; Mature: 14882

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPRCQINQNINQFWRLAGEVIGQDLPGMEYAARLQVLLAHRIGLWDVVAEAKREGSLDS
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH
KIRDHAGNDLAGLIASLPELALIAFNGGTASRIGVKALGDIGDRHTILKLPSSSPAYAAV
HHHHHCCCHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEC
PYAQKLAAWQALREWLS
HHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLPRCQINQNINQFWRLAGEVIGQDLPGMEYAARLQVLLAHRIGLWDVVAEAKREGSLDS
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHH
KIRDHAGNDLAGLIASLPELALIAFNGGTASRIGVKALGDIGDRHTILKLPSSSPAYAAV
HHHHHCCCHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEC
PYAQKLAAWQALREWLS
HHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA