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The map label for this gene is ylbK [H]

Identifier: 187927933

GI number: 187927933

Start: 887832

End: 889835

Strand: Direct

Name: ylbK [H]

Synonym: Rpic_0838

Alternate gene names: 187927933

Gene position: 887832-889835 (Clockwise)

Preceding gene: 187927930

Following gene: 187927934

Centisome position: 22.52

GC content: 65.77

Gene sequence:

>2004_bases
ATGGCTTCTCTGACGGCCTTCCTGTTTCGCCGCCGCGGCTCCCGATTGGCTGCCGCCGTGCTTACCGCGTTTGTGGCACT
GACGACGTTGCCGCCCGCCGTGCATGGCCAGACTGCGGCGGCGCCAGTGCAGGCGAACACCGAATCGACGCGGCCGCGAA
TCGGTCTGGTGCTCTCGGGCGGCGGGGCGCGCGGCTATGCGCATATTGGCGTGCTGAAGATGCTGGAGCGCATGCGCATT
CCTGTGGATGTGATTGCCGCCACCAGCATGGGCGCCGTGGTGGGCGGGCTCTACGCCAGCGGTATGCGGGCGGACGCGTT
GGAGCAGAAGCTCTCACAGGTGGACCTGAGCGACATCGCCTTCGATCGCAACGATCGCGCCAAGCTGCCGCAGTCGCTGC
GCGAGGATGATTTCCAGTACCCGATCGGCCTGTCGGCCGGCTATGGCAACGGCAACCTCAAGCTGCCGGCCGGGCTGGTG
CAGGGCAACCGCCTGCTCGCGCTCCTCAAGAACTGGACGGCGCAGTGGCCCGACAACATCGACTTCTCGCGCCTGCCCAT
TCCGTTCAAGGCCATGGCGACGGATCTGGCCACGGGCGACGGAGTGATTCTCGACCACGGCTCGCTGCCGCTGGCGATGC
GGGCCAGCATGGCGGTGCCGGGGCTGTTCGCGCCCTTCGAGGTGGGCGGGCGTACGCTGGTGGATGGCGGCCTGGTGAGC
AACCTGCCCGTGCAGCTTGCGCGCGACATGGGGGCTGACATCATCATCGCCGTCAACATCGGGTCGGACTTGGAGCGGCC
TGAAGACCTGGCCTCGCCTGCGGCGGTGACGCAACAGATGATCACCATCCTCGTCGGCCAGAACGTCCGTGCGCAGAAGG
CGCTGCTGCGCGGCCAGGATGTGCTGATCGAGCCGCAGCTCTCGGAGCTTTCGTTCACCGATTTCGCCAAGGGCCCGCAG
GGTGTGCGGCAGGGTGAACGCGCGGCGCAGGGCGTCGAGGCGAAGCTCGCGACGTTGTCGCTGTCGCCGCACGCGTATGC
CGCGTACCGCGCTACCCACGAGCCGCAGGGCACGCTCGTGGCGGGCGCACGCATTGACGCCATCGATGTGACCACCAGCG
GCCGCGTGCCGCCCGCGCGCGTGCGTCAGTTGATCAAGGTGCGTGAAGGCGATGCGTATGACGCCGAGGCGCTGAACCGC
GAACTGTCGGCGCTGGCCACCACGGGCGACTTCGAAACCGTCACGCAGCAACTGGTGGAACAGAACGGTGTGCATACGCT
GAAGATCGACGCGCACGAAAAGTCGTGGGGCAACCAGTTCTTCCTGTTCGGGCTGGGCATGTCGACCAACTTCGACGGGC
GTGGCGCATTCAACATCAACCTTGGCCATCGGTATCCGTGGCTCACGCAGAGCGGGCTGGAGTGGCGCAACGACATCGTC
CTCGGCAGCAACCGGGCGAGCATCCATACCGAGCTGCGGCAGCCGCTGTGGCAGGCGCGCGGGTTTTACGTGGCGCCGTA
TGCCGAGTACTCGCGTCGCAGATCGGATCTCTACTTTGACGATCAGCCGCCCACCCGGGACGCCAAGCCGTTCAACAACC
TGACCATCGAGACGGCGCGCGCCGGCGTTGACCTGGGCATCCCGTTGGGCCGCAAGGGTGAGCTGCGCCTGGGCGTGAAC
TACGTCAGGAAGACGGCAACGTTCAATTACCTGCAATTGATCGCGGACGAGTCCGGGAATGTCGTGGATGCGACGGCTGT
TGACACCTTGCGCACCCAGCAGCCGGCCTTTCGCGCCCAACTTACGCTGGACCAGCTCGACGATCCGCTGTTCCCGCGCA
GCGGCTATTACTTCTACAGCAGCGTGGAAGCGGGCTTCGGTTCGCCCGACAAGAAGTTCAACACCGCCCAGGCCAAGGGC
CTAGAGCGTGTTATGCACTTTCCGTCGGTGCTGCAGTCGAAGCGTGATGGAGAAACGCAGACCGTATCCGAGCGACGTGA
GTGA

Upstream 100 bases:

>100_bases
CGTGGTTTCGCGTGGCGCAAGCAATTGCACCGGGTAAATCCGGGTTGTGGAATCATTGCGCCTGCTGCGCTGCCCACCCA
CTCCAATTCGCCCTCCATTC

Downstream 100 bases:

>100_bases
CGAAGAATGGAGCTTCGCGGCGCCGTATTTGACGTTGATGAACCAAGACGCGCCGCAGAGGCGATATGAATTGCGAGAGC
TGTTCAACGCGCTGCGTTGG

Product: Patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 666

Protein sequence:

>667_residues
MASLTAFLFRRRGSRLAAAVLTAFVALTTLPPAVHGQTAAAPVQANTESTRPRIGLVLSGGGARGYAHIGVLKMLERMRI
PVDVIAATSMGAVVGGLYASGMRADALEQKLSQVDLSDIAFDRNDRAKLPQSLREDDFQYPIGLSAGYGNGNLKLPAGLV
QGNRLLALLKNWTAQWPDNIDFSRLPIPFKAMATDLATGDGVILDHGSLPLAMRASMAVPGLFAPFEVGGRTLVDGGLVS
NLPVQLARDMGADIIIAVNIGSDLERPEDLASPAAVTQQMITILVGQNVRAQKALLRGQDVLIEPQLSELSFTDFAKGPQ
GVRQGERAAQGVEAKLATLSLSPHAYAAYRATHEPQGTLVAGARIDAIDVTTSGRVPPARVRQLIKVREGDAYDAEALNR
ELSALATTGDFETVTQQLVEQNGVHTLKIDAHEKSWGNQFFLFGLGMSTNFDGRGAFNINLGHRYPWLTQSGLEWRNDIV
LGSNRASIHTELRQPLWQARGFYVAPYAEYSRRRSDLYFDDQPPTRDAKPFNNLTIETARAGVDLGIPLGRKGELRLGVN
YVRKTATFNYLQLIADESGNVVDATAVDTLRTQQPAFRAQLTLDQLDDPLFPRSGYYFYSSVEAGFGSPDKKFNTAQAKG
LERVMHFPSVLQSKRDGETQTVSERRE

Sequences:

>Translated_667_residues
MASLTAFLFRRRGSRLAAAVLTAFVALTTLPPAVHGQTAAAPVQANTESTRPRIGLVLSGGGARGYAHIGVLKMLERMRI
PVDVIAATSMGAVVGGLYASGMRADALEQKLSQVDLSDIAFDRNDRAKLPQSLREDDFQYPIGLSAGYGNGNLKLPAGLV
QGNRLLALLKNWTAQWPDNIDFSRLPIPFKAMATDLATGDGVILDHGSLPLAMRASMAVPGLFAPFEVGGRTLVDGGLVS
NLPVQLARDMGADIIIAVNIGSDLERPEDLASPAAVTQQMITILVGQNVRAQKALLRGQDVLIEPQLSELSFTDFAKGPQ
GVRQGERAAQGVEAKLATLSLSPHAYAAYRATHEPQGTLVAGARIDAIDVTTSGRVPPARVRQLIKVREGDAYDAEALNR
ELSALATTGDFETVTQQLVEQNGVHTLKIDAHEKSWGNQFFLFGLGMSTNFDGRGAFNINLGHRYPWLTQSGLEWRNDIV
LGSNRASIHTELRQPLWQARGFYVAPYAEYSRRRSDLYFDDQPPTRDAKPFNNLTIETARAGVDLGIPLGRKGELRLGVN
YVRKTATFNYLQLIADESGNVVDATAVDTLRTQQPAFRAQLTLDQLDDPLFPRSGYYFYSSVEAGFGSPDKKFNTAQAKG
LERVMHFPSVLQSKRDGETQTVSERRE
>Mature_666_residues
ASLTAFLFRRRGSRLAAAVLTAFVALTTLPPAVHGQTAAAPVQANTESTRPRIGLVLSGGGARGYAHIGVLKMLERMRIP
VDVIAATSMGAVVGGLYASGMRADALEQKLSQVDLSDIAFDRNDRAKLPQSLREDDFQYPIGLSAGYGNGNLKLPAGLVQ
GNRLLALLKNWTAQWPDNIDFSRLPIPFKAMATDLATGDGVILDHGSLPLAMRASMAVPGLFAPFEVGGRTLVDGGLVSN
LPVQLARDMGADIIIAVNIGSDLERPEDLASPAAVTQQMITILVGQNVRAQKALLRGQDVLIEPQLSELSFTDFAKGPQG
VRQGERAAQGVEAKLATLSLSPHAYAAYRATHEPQGTLVAGARIDAIDVTTSGRVPPARVRQLIKVREGDAYDAEALNRE
LSALATTGDFETVTQQLVEQNGVHTLKIDAHEKSWGNQFFLFGLGMSTNFDGRGAFNINLGHRYPWLTQSGLEWRNDIVL
GSNRASIHTELRQPLWQARGFYVAPYAEYSRRRSDLYFDDQPPTRDAKPFNNLTIETARAGVDLGIPLGRKGELRLGVNY
VRKTATFNYLQLIADESGNVVDATAVDTLRTQQPAFRAQLTLDQLDDPLFPRSGYYFYSSVEAGFGSPDKKFNTAQAKGL
ERVMHFPSVLQSKRDGETQTVSERRE

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI148727335, Length=212, Percent_Identity=33.4905660377358, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI148727290, Length=212, Percent_Identity=33.4905660377358, Blast_Score=100, Evalue=5e-21,
Organism=Escherichia coli, GI226510936, Length=315, Percent_Identity=27.9365079365079, Blast_Score=112, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6323581, Length=222, Percent_Identity=31.0810810810811, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 72496; Mature: 72365

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLTAFLFRRRGSRLAAAVLTAFVALTTLPPAVHGQTAAAPVQANTESTRPRIGLVLSG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
GGARGYAHIGVLKMLERMRIPVDVIAATSMGAVVGGLYASGMRADALEQKLSQVDLSDIA
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHE
FDRNDRAKLPQSLREDDFQYPIGLSAGYGNGNLKLPAGLVQGNRLLALLKNWTAQWPDNI
ECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEECCHHHHCCCHHHHHHHHCCCCCCCCC
DFSRLPIPFKAMATDLATGDGVILDHGSLPLAMRASMAVPGLFAPFEVGGRTLVDGGLVS
CCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCCCCCHHCCCEEEECCCCCC
NLPVQLARDMGADIIIAVNIGSDLERPEDLASPAAVTQQMITILVGQNVRAQKALLRGQD
CCHHHHHHHCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC
VLIEPQLSELSFTDFAKGPQGVRQGERAAQGVEAKLATLSLSPHAYAAYRATHEPQGTLV
EEECCCHHHCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCEE
AGARIDAIDVTTSGRVPPARVRQLIKVREGDAYDAEALNRELSALATTGDFETVTQQLVE
ECCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
QNGVHTLKIDAHEKSWGNQFFLFGLGMSTNFDGRGAFNINLGHRYPWLTQSGLEWRNDIV
HCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
LGSNRASIHTELRQPLWQARGFYVAPYAEYSRRRSDLYFDDQPPTRDAKPFNNLTIETAR
ECCCCHHHHHHHHHHHHHHCCEEEECHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEHH
AGVDLGIPLGRKGELRLGVNYVRKTATFNYLQLIADESGNVVDATAVDTLRTQQPAFRAQ
CCCEECCCCCCCCCEEECHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHCCCCHHHHE
LTLDQLDDPLFPRSGYYFYSSVEAGFGSPDKKFNTAQAKGLERVMHFPSVLQSKRDGETQ
EEHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
TVSERRE
HHHHHCC
>Mature Secondary Structure 
ASLTAFLFRRRGSRLAAAVLTAFVALTTLPPAVHGQTAAAPVQANTESTRPRIGLVLSG
CHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
GGARGYAHIGVLKMLERMRIPVDVIAATSMGAVVGGLYASGMRADALEQKLSQVDLSDIA
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHE
FDRNDRAKLPQSLREDDFQYPIGLSAGYGNGNLKLPAGLVQGNRLLALLKNWTAQWPDNI
ECCCCHHHHHHHHHHCCCCCCCEEEECCCCCCEECCHHHHCCCHHHHHHHHCCCCCCCCC
DFSRLPIPFKAMATDLATGDGVILDHGSLPLAMRASMAVPGLFAPFEVGGRTLVDGGLVS
CCCCCCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCCCCCHHCCCEEEECCCCCC
NLPVQLARDMGADIIIAVNIGSDLERPEDLASPAAVTQQMITILVGQNVRAQKALLRGQD
CCHHHHHHHCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC
VLIEPQLSELSFTDFAKGPQGVRQGERAAQGVEAKLATLSLSPHAYAAYRATHEPQGTLV
EEECCCHHHCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCCCEE
AGARIDAIDVTTSGRVPPARVRQLIKVREGDAYDAEALNRELSALATTGDFETVTQQLVE
ECCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
QNGVHTLKIDAHEKSWGNQFFLFGLGMSTNFDGRGAFNINLGHRYPWLTQSGLEWRNDIV
HCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
LGSNRASIHTELRQPLWQARGFYVAPYAEYSRRRSDLYFDDQPPTRDAKPFNNLTIETAR
ECCCCHHHHHHHHHHHHHHCCEEEECHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEHH
AGVDLGIPLGRKGELRLGVNYVRKTATFNYLQLIADESGNVVDATAVDTLRTQQPAFRAQ
CCCEECCCCCCCCCEEECHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHHHCCCCHHHHE
LTLDQLDDPLFPRSGYYFYSSVEAGFGSPDKKFNTAQAKGLERVMHFPSVLQSKRDGETQ
EEHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
TVSERRE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]